Miyakogusa Predicted Gene

Lj4g3v0072450.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj4g3v0072450.1 tr|A9RGR4|A9RGR4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_174728,43.75,3e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL;
VACUOLAR SORTING PROTEIN
53,NULL,NODE_36394_length_799_cov_59.660828.path1.1
         (411 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82076 homologue to UniRef100_A7PVI9 Cluster: Chromoso...   815   0.0  

>gnl|LJGI|TC82076 homologue to UniRef100_A7PVI9 Cluster: Chromosome chr9 scaffold_33,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_33, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 721

 Score =  815 bits (411), Expect = 0.0
 Identities = 411/411 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcaaagctgaggctcttttgaaggttatactttctccagttgattctgtagcagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atgagcaaagctgaggctcttttgaaggttatactttctccagttgattctgtagcagat 160

                                                                       
Query: 61  acctaccgtgcattgctacctgagggtacacccatggaatttcagcgaatattggagctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 acctaccgtgcattgctacctgagggtacacccatggaatttcagcgaatattggagctt 220

                                                                       
Query: 121 aagggtctcaaaaaagctgatcaacaaagcatactagatgacttcaacaaacatggacct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aagggtctcaaaaaagctgatcaacaaagcatactagatgacttcaacaaacatggacct 280

                                                                       
Query: 181 ggcattaagcaaactcaggtttcgcctgcaattgtacctgctccacctgtagctcctgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ggcattaagcaaactcaggtttcgcctgcaattgtacctgctccacctgtagctcctgtg 340

                                                                       
Query: 241 gtacctagccccgcagctgtcggactcgtcgcttcccgggaagatgttctaactagggcg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gtacctagccccgcagctgtcggactcgtcgcttcccgggaagatgttctaactagggcg 400

                                                                       
Query: 301 gctgctcttggacgtggagctgccaccacagggttcaagcggttcctagctctaaccgaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gctgctcttggacgtggagctgccaccacagggttcaagcggttcctagctctaaccgaa 460

                                                              
Query: 361 gctgccaaagacaggaaggatgggcctttccgaaagctttttaatccgtaa 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gctgccaaagacaggaaggatgggcctttccgaaagctttttaatccgtaa 511