Miyakogusa Predicted Gene
- Lj4g3v0071100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v0071100.1 Non Chatacterized Hit- tr|I1L360|I1L360_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.64,5e-18,SCO1-SenC,Copper chaperone SCO1/SenC;
Thioredoxin-like,Thioredoxin-like fold; no
description,Thiored,gene.g51457.t1.1
(423 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82551 similar to UniRef100_A7QHP1 Cluster: Chromosome... 230 6e-60
gnl|LJGI|TC67228 similar to UniRef100_A7QHP1 Cluster: Chromosome... 222 1e-57
gnl|LJGI|TC76605 similar to UniRef100_A7QHP1 Cluster: Chromosome... 196 8e-50
>gnl|LJGI|TC82551 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 572
Score = 230 bits (116), Expect = 6e-60
Identities = 143/152 (94%)
Strand = Plus / Plus
Query: 264 agacattcataatgcttcgaaggcagtgaagcatggaccttatgtgggaaaaactgcaat 323
|||||| |||||||||| |||||||||||||| ||||||||||| ||||||| |||||||
Sbjct: 208 agacatacataatgcttagaaggcagtgaagcctggaccttatgcgggaaaagctgcaat 267
Query: 324 tgggggtccatttcaccttaccaaccatcatgggaagcaccttactgaaaatgacttctt 383
|||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||
Sbjct: 268 tgggggtccatttcaccttaccaaccatcatgggaagcacgttactgtaaaggacttctt 327
Query: 384 ggggaagtggacagtgatgtattttggattta 415
||| ||||||||||||||||||||||||||||
Sbjct: 328 gggaaagtggacagtgatgtattttggattta 359
>gnl|LJGI|TC67228 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 856
Score = 222 bits (112), Expect = 1e-57
Identities = 142/152 (93%)
Strand = Plus / Plus
Query: 264 agacattcataatgcttcgaaggcagtgaagcatggaccttatgtgggaaaaactgcaat 323
|||||| |||||||||| |||||||||||||| ||||||||||| ||||||| |||||||
Sbjct: 278 agacatacataatgcttagaaggcagtgaagcctggaccttatgcgggaaaagctgcaat 337
Query: 324 tgggggtccatttcaccttaccaaccatcatgggaagcaccttactgaaaatgacttctt 383
||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||||||||
Sbjct: 338 tgggggtccatttcaccttaccaaccatcctgggaagcacgttactgtaaaggacttctt 397
Query: 384 ggggaagtggacagtgatgtattttggattta 415
||| ||||||||||||||||||||||||||||
Sbjct: 398 gggaaagtggacagtgatgtattttggattta 429
>gnl|LJGI|TC76605 similar to UniRef100_A7QHP1 Cluster: Chromosome chr8 scaffold_99,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_99, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (87%)
Length = 1232
Score = 196 bits (99), Expect = 8e-50
Identities = 136/147 (92%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 272 ataatgcttcgaaggcagtgaagcatggaccttatgtgggaaaaactgcaattgggggtc 331
|||||||||| ||||||||||||||||||||| | ||||||| |||||||||||||||
Sbjct: 462 ataatgcttcagaggcagtgaagcatggaccttccgcgggaaaagctgcaattgggggtc 521
Query: 332 catttcaccttaccaaccatcatgggaagcaccttactgaaaatgacttcttggggaagt 391
|||||||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||
Sbjct: 522 catttcaccttaccaaccatcatgggaagcgcgttactgaaaaggacttcttgggaaagt 581
Query: 392 ggacagtgatgta-ttttggatttact 417
||||||||||||| |||||||||||||
Sbjct: 582 ggacagtgatgtatttttggatttact 608