Miyakogusa Predicted Gene

Lj3g3v3360870.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3360870.1 Non Chatacterized Hit- tr|I1LJC6|I1LJC6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36234
PE,66.14,0,seg,NULL; helix loop helix domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; no descripti,CUFF.45674.1
         (408 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting basic-hel...   179   4e-45
AT2G18300.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   176   2e-44
AT3G07340.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   176   3e-44
AT2G18300.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   175   6e-44
AT1G68920.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   175   6e-44
AT1G68920.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   175   6e-44
AT1G68920.3 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   175   7e-44
AT2G18300.3 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   174   7e-44
AT5G48560.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   172   5e-43
AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting basic-hel...   166   2e-41
AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting basic-hel...   166   2e-41
AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting basic-hel...   166   2e-41
AT1G10120.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   161   8e-40
AT3G23690.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   159   4e-39
AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17...   158   6e-39
AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17...   156   2e-38
AT3G57800.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   152   3e-37
AT2G42300.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   149   3e-36
AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P | chr1:21...   149   3e-36
AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P | chr1:219...   149   4e-36
AT5G50915.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   142   4e-34
AT5G50915.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   142   4e-34
AT5G62610.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   137   2e-32
AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 | chr1:63...   130   2e-30
AT3G57800.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   129   3e-30
AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27...   129   4e-30
AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27...   129   5e-30
AT1G25330.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...   123   2e-28
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508...    99   4e-21
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348...    99   4e-21
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032...    96   5e-20
AT2G42300.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    84   2e-16
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin...    77   3e-14
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin...    77   3e-14
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact...    76   5e-14
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l...    76   5e-14
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l...    76   5e-14
AT4G28790.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    75   6e-14
AT1G51140.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    72   5e-13
AT2G42280.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    72   7e-13
AT4G09180.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    72   9e-13
AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA...    71   1e-12
AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA...    71   1e-12
AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA...    70   2e-12
AT1G03040.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    70   2e-12
AT1G03040.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    70   2e-12
AT1G35460.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    69   4e-12
AT4G28815.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    69   5e-12
AT4G28790.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    68   1e-11
AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-l...    68   1e-11
AT4G28800.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    67   2e-11
AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | chr...    65   8e-11
AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 | chr...    64   1e-10
AT2G43010.1 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interact...    64   2e-10
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA...    64   2e-10
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b...    63   3e-10
AT2G43010.2 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interact...    63   4e-10
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b...    62   5e-10
AT2G43140.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    62   6e-10
AT2G14760.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    62   6e-10
AT2G43140.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    62   8e-10
AT1G05805.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    61   1e-09
AT3G59060.4 | Symbols: PIL6, PIF5 | phytochrome interacting fact...    60   2e-09
AT3G59060.3 | Symbols: PIL6, PIF5 | phytochrome interacting fact...    60   2e-09
AT3G59060.2 | Symbols: PIL6, PIF5 | phytochrome interacting fact...    60   2e-09
AT3G59060.1 | Symbols: PIL6, PIF5 | phytochrome interacting fact...    60   2e-09
AT3G21330.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    59   5e-09
AT5G43175.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    58   1e-08
AT2G14760.3 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    55   9e-08
AT5G61270.2 | Symbols: PIF7 | phytochrome-interacting factor7 | ...    54   2e-07
AT5G61270.1 | Symbols: PIF7 | phytochrome-interacting factor7 | ...    54   3e-07
AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-12896...    53   3e-07
AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 | chr1:247953...    53   3e-07
AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 | chr5:1503...    53   3e-07
AT4G28811.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-bind...    53   4e-07
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL...    51   1e-06
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-...    51   1e-06
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he...    51   1e-06
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he...    51   1e-06

>AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting
           basic-helix-loop-helix 1 | chr4:16498466-16499946
           FORWARD LENGTH=335
          Length = 335

 Score =  179 bits (453), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/321 (38%), Positives = 159/321 (49%), Gaps = 52/321 (16%)

Query: 21  DMTVLERQRVSSKKWQHEQEHENQGYFC------GGGADSALGEVVARSVKPDPGFENGW 74
           DM+VLERQR   K      +    G+F       GG  DS L                  
Sbjct: 15  DMSVLERQRAHLKYLNPTFDSPLAGFFADSSMITGGEMDSYLST---------------- 58

Query: 75  PELGKFVVAGFGSGFDASSAISRTCSNGDLVSATKKMMGSVSGKESLKKRKADNKAQNSN 134
                       +G +       T   GD  S       +  G  + KKRK D + ++ N
Sbjct: 59  ------------AGLNLPMMYGETTVEGD--SRLSISPETTLGTGNFKKRKFDTETKDCN 104

Query: 135 SKVFVESDSKDKRIKVXXXXXXXXXXXXXXXXXXXXCTNRNSRETSEDTSKENSKGSEVQ 194
            K    + ++D  ++                          +++   + S ++SK ++ +
Sbjct: 105 EKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTK-E 163

Query: 195 NQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIIN 254
            +K +YIHVRARRGQATDSHS+AER+RREKISERMK+LQDLVPGC+KI GKAGMLDEIIN
Sbjct: 164 LEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIIN 223

Query: 255 YVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVFPACAQSFPS--------------I 300
           YVQSLQRQ+EFLSMKLA VNPR DF++D++F KEV        PS               
Sbjct: 224 YVQSLQRQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVHS 283

Query: 301 GMQSDMTNHPAYLQFNSAQQL 321
           G  S+M N   YL  N  QQ+
Sbjct: 284 GYSSEMVNS-GYLHVNPMQQV 303


>AT2G18300.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:7953022-7954446 REVERSE
           LENGTH=335
          Length = 335

 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 83/119 (69%), Positives = 100/119 (84%), Gaps = 1/119 (0%)

Query: 172 TNRNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKY 231
           +N  + E S DTSKE SKG+  +NQK +YIHVRARRGQATD HSLAER RREKIS++MKY
Sbjct: 155 SNMGNTEASSDTSKETSKGAS-ENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKY 213

Query: 232 LQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVF 290
           LQD+VPGCNK+ GKAGMLDEIINYVQ LQRQVEFLSMKLA +NP L+  ++++ VK+ +
Sbjct: 214 LQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVKQAY 272


>AT3G07340.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr3:2341188-2343288 REVERSE
           LENGTH=456
          Length = 456

 Score =  176 bits (445), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/215 (46%), Positives = 131/215 (60%), Gaps = 29/215 (13%)

Query: 184 SKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIA 243
           S+EN   ++  +   +YIHVRARRGQATDSHSLAER+RREKISERMK LQDLVPGCNK+ 
Sbjct: 239 SEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVT 298

Query: 244 GKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVFPACAQSFPSIGMQ 303
           GKA MLDEIINYVQSLQRQVEFLSMKL++VN RLDFN+D L  K++FP+           
Sbjct: 299 GKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFPSS---------- 348

Query: 304 SDMTNHPAYLQFNSAQQLVSYCGGLVNNTEIIPTDMGVRRNMNVPVSMPETFLDSSCFTQ 363
           +++ +H   LQ +S+ +  +  G   N    +  D+     +N P+   ET      F  
Sbjct: 349 NNLMHHQQVLQLDSSAE--TLLGDHHNKNLQLNPDISSNNVIN-PLETSET----RSFIS 401

Query: 364 ILPSLSW------------EGDFQNLQSVAFDQGR 386
            LP+L+             E D  ++  + F Q R
Sbjct: 402 HLPTLAHFTDSISQYSTFSEDDLHSIIHMGFAQNR 436


>AT2G18300.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:7953022-7954446 REVERSE
           LENGTH=337
          Length = 337

 Score =  175 bits (443), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 83/117 (70%), Positives = 99/117 (84%), Gaps = 1/117 (0%)

Query: 172 TNRNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKY 231
           +N  + E S DTSKE SKG+  +NQK +YIHVRARRGQATD HSLAER RREKIS++MKY
Sbjct: 155 SNMGNTEASSDTSKETSKGAS-ENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKY 213

Query: 232 LQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 288
           LQD+VPGCNK+ GKAGMLDEIINYVQ LQRQVEFLSMKLA +NP L+  ++++ VK+
Sbjct: 214 LQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVKQ 270


>AT1G68920.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:25915620-25917675 FORWARD
           LENGTH=486
          Length = 486

 Score =  175 bits (443), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 138/239 (57%), Gaps = 27/239 (11%)

Query: 174 RNSRETSEDTSKENSKGSEVQNQ-----KPEYIHVRARRGQATDSHSLAERIRREKISER 228
           RN  ++     K+++ G +   Q     K  YIHVRARRGQAT+SHSLAER+RREKISER
Sbjct: 269 RNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISER 328

Query: 229 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 288
           MK+LQDLVPGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP++DFN++ L  K+
Sbjct: 329 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKD 388

Query: 289 VFPACAQSFPSIGMQSDMTNHPAYLQFNSAQQLVSYCGGLVNNTEIIPTDMGVRRNMNVP 348
                A S  +     +M+     L     QQ +S  G  +  + + P + G +R     
Sbjct: 389 ALQLRAGSSSTTPFPPNMSMAYPPLPHGFMQQTLSSIGRTI-TSPLSPMNGGFKRQ---- 443

Query: 349 VSMPETFLDSSCFTQILPSLSWEGDFQNLQSVAFDQGRSSSFPSQPFTDLVEASDLKME 407
               ET               WEGD QN+  + +  G  +  P    T  + A+++K+E
Sbjct: 444 ----ETN-------------GWEGDLQNVIHINYGAGDVTPDPQAAATASLPAANMKVE 485


>AT1G68920.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:25915620-25917675 FORWARD
           LENGTH=486
          Length = 486

 Score =  175 bits (443), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 138/239 (57%), Gaps = 27/239 (11%)

Query: 174 RNSRETSEDTSKENSKGSEVQNQ-----KPEYIHVRARRGQATDSHSLAERIRREKISER 228
           RN  ++     K+++ G +   Q     K  YIHVRARRGQAT+SHSLAER+RREKISER
Sbjct: 269 RNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISER 328

Query: 229 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 288
           MK+LQDLVPGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP++DFN++ L  K+
Sbjct: 329 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKD 388

Query: 289 VFPACAQSFPSIGMQSDMTNHPAYLQFNSAQQLVSYCGGLVNNTEIIPTDMGVRRNMNVP 348
                A S  +     +M+     L     QQ +S  G  +  + + P + G +R     
Sbjct: 389 ALQLRAGSSSTTPFPPNMSMAYPPLPHGFMQQTLSSIGRTI-TSPLSPMNGGFKRQ---- 443

Query: 349 VSMPETFLDSSCFTQILPSLSWEGDFQNLQSVAFDQGRSSSFPSQPFTDLVEASDLKME 407
               ET               WEGD QN+  + +  G  +  P    T  + A+++K+E
Sbjct: 444 ----ETN-------------GWEGDLQNVIHINYGAGDVTPDPQAAATASLPAANMKVE 485


>AT1G68920.3 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:25915620-25917675 FORWARD
           LENGTH=485
          Length = 485

 Score =  175 bits (443), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 138/239 (57%), Gaps = 27/239 (11%)

Query: 174 RNSRETSEDTSKENSKGSEVQNQ-----KPEYIHVRARRGQATDSHSLAERIRREKISER 228
           RN  ++     K+++ G +   Q     K  YIHVRARRGQAT+SHSLAER+RREKISER
Sbjct: 268 RNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISER 327

Query: 229 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 288
           MK+LQDLVPGCNK+ GKA MLDEIINYVQSLQRQVEFLSMKLA VNP++DFN++ L  K+
Sbjct: 328 MKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAKD 387

Query: 289 VFPACAQSFPSIGMQSDMTNHPAYLQFNSAQQLVSYCGGLVNNTEIIPTDMGVRRNMNVP 348
                A S  +     +M+     L     QQ +S  G  +  + + P + G +R     
Sbjct: 388 ALQLRAGSSSTTPFPPNMSMAYPPLPHGFMQQTLSSIGRTI-TSPLSPMNGGFKRQ---- 442

Query: 349 VSMPETFLDSSCFTQILPSLSWEGDFQNLQSVAFDQGRSSSFPSQPFTDLVEASDLKME 407
               ET               WEGD QN+  + +  G  +  P    T  + A+++K+E
Sbjct: 443 ----ETN-------------GWEGDLQNVIHINYGAGDVTPDPQAAATASLPAANMKVE 484


>AT2G18300.3 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:7952546-7954446 REVERSE
           LENGTH=364
          Length = 364

 Score =  174 bits (442), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 83/117 (70%), Positives = 99/117 (84%), Gaps = 1/117 (0%)

Query: 172 TNRNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKY 231
           +N  + E S DTSKE SKG+  +NQK +YIHVRARRGQATD HSLAER RREKIS++MKY
Sbjct: 155 SNMGNTEASSDTSKETSKGAS-ENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKY 213

Query: 232 LQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 288
           LQD+VPGCNK+ GKAGMLDEIINYVQ LQRQVEFLSMKLA +NP L+  ++++ VK+
Sbjct: 214 LQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELELAVEDVSVKQ 270


>AT5G48560.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr5:19684160-19686871 FORWARD
           LENGTH=498
          Length = 498

 Score =  172 bits (435), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 99/182 (54%), Positives = 121/182 (66%), Gaps = 18/182 (9%)

Query: 195 NQKP-----EYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGML 249
           N KP     +YIHVRARRGQATDSHSLAER+RREKI ERMK LQDLVPGCNK+ GKA ML
Sbjct: 288 NTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALML 347

Query: 250 DEIINYVQSLQRQVEFLSMKLAAVN-PRLDFNIDELFVKEV-FPACAQSFPSIGMQSDMT 307
           DEIINYVQSLQRQVEFLSMKL++VN  RLDFN+D L  K+V  P+        G+QS  +
Sbjct: 348 DEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEEGLQSKSS 407

Query: 308 NHPAYLQFNSAQQLVSYCGGLVNNTEIIPTDMGVRRNMNVPVSMPETFLDSSCFTQILPS 367
           +H      +  QQL  Y     NN++++P        +  P++  ET   +  FT  LP+
Sbjct: 408 SH------HHQQQLNIYN----NNSQLLPNISSNNMMLQSPMNSLETSTLARSFTH-LPT 456

Query: 368 LS 369
           L+
Sbjct: 457 LT 458


>AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting
           basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
           LENGTH=339
          Length = 339

 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 99/125 (79%)

Query: 174 RNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQ 233
           ++ +  + + +K NS+     + K  YIH+RARRGQAT+SHSLAER+RREKISERMK+LQ
Sbjct: 143 KDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQ 202

Query: 234 DLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVFPAC 293
           DLVPGC+K+ GKA MLDEIINYVQSLQ Q+EFLSMKL+AVNP LDFN++ L  K+   + 
Sbjct: 203 DLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSS 262

Query: 294 AQSFP 298
           A +FP
Sbjct: 263 APTFP 267


>AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting
           basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
           LENGTH=390
          Length = 390

 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 99/125 (79%)

Query: 174 RNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQ 233
           ++ +  + + +K NS+     + K  YIH+RARRGQAT+SHSLAER+RREKISERMK+LQ
Sbjct: 194 KDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQ 253

Query: 234 DLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVFPAC 293
           DLVPGC+K+ GKA MLDEIINYVQSLQ Q+EFLSMKL+AVNP LDFN++ L  K+   + 
Sbjct: 254 DLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSS 313

Query: 294 AQSFP 298
           A +FP
Sbjct: 314 APTFP 318


>AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting
           basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
           LENGTH=390
          Length = 390

 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/125 (62%), Positives = 99/125 (79%)

Query: 174 RNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQ 233
           ++ +  + + +K NS+     + K  YIH+RARRGQAT+SHSLAER+RREKISERMK+LQ
Sbjct: 194 KDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQ 253

Query: 234 DLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVFPAC 293
           DLVPGC+K+ GKA MLDEIINYVQSLQ Q+EFLSMKL+AVNP LDFN++ L  K+   + 
Sbjct: 254 DLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLESLLAKDALQSS 313

Query: 294 AQSFP 298
           A +FP
Sbjct: 314 APTFP 318


>AT1G10120.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:3304228-3305984 REVERSE
           LENGTH=366
          Length = 366

 Score =  161 bits (407), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 100/125 (80%), Gaps = 2/125 (1%)

Query: 178 ETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVP 237
           ++ E  +KE+S+  E    K  YIH+RARRGQAT+SHSLAER+RREKISERM+ LQ+LVP
Sbjct: 183 QSKETVNKESSQSEEAP--KENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELVP 240

Query: 238 GCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVFPACAQSF 297
           GCNKI GKA MLDEIINYVQSLQ+QVEFLSMKLA VNP ++ +ID +  K++  +  ++ 
Sbjct: 241 GCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDIDRILAKDLLQSRDRNT 300

Query: 298 PSIGM 302
           P++G+
Sbjct: 301 PTLGL 305


>AT3G23690.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr3:8528933-8530655 REVERSE
           LENGTH=371
          Length = 371

 Score =  159 bits (401), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/109 (71%), Positives = 86/109 (78%), Gaps = 5/109 (4%)

Query: 187 NSKGSEVQNQKP-----EYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNK 241
           +SKG    + KP     +YIHVRARRGQATDSHSLAER RREKISERM  LQDLVPGCN+
Sbjct: 170 DSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNR 229

Query: 242 IAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVF 290
           I GKA MLDEIINYVQSLQRQVEFLSMKLA VNPR++FN +     E+ 
Sbjct: 230 ITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMI 278


>AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 |
           chr4:17243699-17244965 FORWARD LENGTH=302
          Length = 302

 Score =  158 bits (400), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 71/95 (74%), Positives = 85/95 (89%)

Query: 196 QKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINY 255
           QKP+YIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPGCNK+ GKAGMLDEIINY
Sbjct: 134 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193

Query: 256 VQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVF 290
           VQSLQ+QVEFLSMKL+ +NP L+ +ID+L  K+ +
Sbjct: 194 VQSLQQQVEFLSMKLSVINPELECHIDDLSAKQAY 228


>AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 |
           chr4:17243699-17244965 FORWARD LENGTH=304
          Length = 304

 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/93 (76%), Positives = 84/93 (90%)

Query: 196 QKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINY 255
           QKP+YIHVRARRG+ATD HSLAER RREKIS++MK LQD+VPGCNK+ GKAGMLDEIINY
Sbjct: 134 QKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINY 193

Query: 256 VQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 288
           VQSLQ+QVEFLSMKL+ +NP L+ +ID+L  K+
Sbjct: 194 VQSLQQQVEFLSMKLSVINPELECHIDDLSAKQ 226


>AT3G57800.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr3:21408034-21411321 REVERSE
           LENGTH=379
          Length = 379

 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 87/110 (79%)

Query: 194 QNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEII 253
           +N+K  Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+KI G A +LDEII
Sbjct: 195 ENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEII 254

Query: 254 NYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVFPACAQSFPSIGMQ 303
           N+VQSLQRQVE LSM+LAAVNPR+DFN+D +   E       SF +  MQ
Sbjct: 255 NHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPMQ 304


>AT2G42300.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:17621542-17624635 FORWARD
           LENGTH=327
          Length = 327

 Score =  149 bits (377), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 68/96 (70%), Positives = 82/96 (85%)

Query: 193 VQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEI 252
           V++ K  Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ+LVPGC+KI G A +LDEI
Sbjct: 175 VESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEI 234

Query: 253 INYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKE 288
           IN+VQ+LQRQVE LSM+LAAVNPR+DFN+D +   E
Sbjct: 235 INHVQTLQRQVEMLSMRLAAVNPRIDFNLDSILASE 270


>AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P |
           chr1:21909464-21911030 REVERSE LENGTH=264
          Length = 264

 Score =  149 bits (376), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 78/120 (65%), Positives = 90/120 (75%), Gaps = 12/120 (10%)

Query: 178 ETSEDTSKENSKGSEVQNQK------PEYIHVRARRGQATDSHSLAERIRREKISERMKY 231
           E  +  ++  S G+E + +K       +YIHVRARRGQATDSHSLAER RREKISERMK 
Sbjct: 105 EVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKI 164

Query: 232 LQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVFP 291
           LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++  I      EVFP
Sbjct: 165 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGI------EVFP 218


>AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P |
           chr1:21909635-21911030 REVERSE LENGTH=343
          Length = 343

 Score =  149 bits (376), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 78/120 (65%), Positives = 90/120 (75%), Gaps = 12/120 (10%)

Query: 178 ETSEDTSKENSKGSEVQNQK------PEYIHVRARRGQATDSHSLAERIRREKISERMKY 231
           E  +  ++  S G+E + +K       +YIHVRARRGQATDSHSLAER RREKISERMK 
Sbjct: 105 EVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKI 164

Query: 232 LQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVFP 291
           LQDLVPGCNK+ GKA +LDEIINY+QSLQRQVEFLSMKL AVN R++  I      EVFP
Sbjct: 165 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRMNPGI------EVFP 218


>AT5G50915.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr5:20710764-20712252 REVERSE
           LENGTH=286
          Length = 286

 Score =  142 bits (358), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 89/110 (80%), Gaps = 3/110 (2%)

Query: 175 NSRETSED-TSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQ 233
           NS+E  E   SK+  +GS+ +    +YIHVRARRGQATDSHSLAER+RREKISERM+ LQ
Sbjct: 108 NSKEGVEGRKSKKQKRGSK-EEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQ 166

Query: 234 DLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNID 282
           +LVPGC+K+ GKA MLDEIINYVQ+LQ QVEFLSMKL +++P + DF  D
Sbjct: 167 NLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSD 216


>AT5G50915.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr5:20710764-20712252 REVERSE
           LENGTH=286
          Length = 286

 Score =  142 bits (358), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 89/110 (80%), Gaps = 3/110 (2%)

Query: 175 NSRETSED-TSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQ 233
           NS+E  E   SK+  +GS+ +    +YIHVRARRGQATDSHSLAER+RREKISERM+ LQ
Sbjct: 108 NSKEGVEGRKSKKQKRGSK-EEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQ 166

Query: 234 DLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNID 282
           +LVPGC+K+ GKA MLDEIINYVQ+LQ QVEFLSMKL +++P + DF  D
Sbjct: 167 NLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISPVVYDFGSD 216


>AT5G62610.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr5:25133117-25134600 REVERSE
           LENGTH=281
          Length = 281

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 71/85 (83%), Gaps = 4/85 (4%)

Query: 194 QNQKPE----YIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGML 249
           Q  KPE    YIHVRARRGQATD HSLAER RREKISE+M  LQD++PGCNKI GKA +L
Sbjct: 140 QKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVL 199

Query: 250 DEIINYVQSLQRQVEFLSMKLAAVN 274
           DEIINY+QSLQRQVEFLSMKL  VN
Sbjct: 200 DEIINYIQSLQRQVEFLSMKLEVVN 224


>AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 |
           chr1:6331464-6333576 FORWARD LENGTH=260
          Length = 260

 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/104 (62%), Positives = 77/104 (74%)

Query: 201 IHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQ 260
           +HVRARRGQATDSHSLAER+RR KI+ER++ LQD+VPGC K  G A MLDEIINYVQSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202

Query: 261 RQVEFLSMKLAAVNPRLDFNIDELFVKEVFPACAQSFPSIGMQS 304
            QVEFLSMKL A +   DFN +   V  +  A A+    +G Q+
Sbjct: 203 NQVEFLSMKLTAASSFYDFNSETDAVDSMQRAKARETVEMGRQT 246


>AT3G57800.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr3:21408034-21411321 REVERSE
           LENGTH=426
          Length = 426

 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/157 (47%), Positives = 87/157 (55%), Gaps = 47/157 (29%)

Query: 194 QNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNK------------ 241
           +N+K  Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K            
Sbjct: 195 ENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKV 254

Query: 242 -----------------------------------IAGKAGMLDEIINYVQSLQRQVEFL 266
                                              I G A +LDEIIN+VQSLQRQVE L
Sbjct: 255 CFGVHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEML 314

Query: 267 SMKLAAVNPRLDFNIDELFVKEVFPACAQSFPSIGMQ 303
           SM+LAAVNPR+DFN+D +   E       SF +  MQ
Sbjct: 315 SMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPMQ 351


>AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 |
           chr1:27760027-27761346 FORWARD LENGTH=261
          Length = 261

 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 65/104 (62%), Positives = 76/104 (73%)

Query: 202 HVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQR 261
           HVRARRGQATDSHS+AER+RR KI+ER+K LQD+VPGC K  G A MLDEIINYVQSLQ 
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205

Query: 262 QVEFLSMKLAAVNPRLDFNIDELFVKEVFPACAQSFPSIGMQSD 305
           QVEFLSMKL A +   DFN +   V+ +  A A+    +G   D
Sbjct: 206 QVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREAVEMGQGRD 249


>AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 |
           chr1:27760027-27761346 FORWARD LENGTH=260
          Length = 260

 Score =  129 bits (323), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 60/79 (75%), Positives = 66/79 (83%)

Query: 202 HVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQR 261
           HVRARRGQATDSHS+AER+RR KI+ER+K LQD+VPGC K  G A MLDEIINYVQSLQ 
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205

Query: 262 QVEFLSMKLAAVNPRLDFN 280
           QVEFLSMKL A +   DFN
Sbjct: 206 QVEFLSMKLTAASSYYDFN 224


>AT1G25330.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:8880515-8882018 REVERSE
           LENGTH=223
          Length = 223

 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 77/101 (76%), Gaps = 1/101 (0%)

Query: 190 GSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGML 249
           G E Q  K + +HVRA+RGQATDSHSLAER+RREKI+ER+K LQDLVPGC K  G A ML
Sbjct: 92  GDETQKPK-DVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVML 150

Query: 250 DEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFVKEVF 290
           D II+YV+SLQ Q+EFLSMKL+A +   D N  ++   ++F
Sbjct: 151 DVIIDYVRSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIF 191


>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
           chr4:15079489-15081606 REVERSE LENGTH=310
          Length = 310

 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/90 (60%), Positives = 67/90 (74%), Gaps = 5/90 (5%)

Query: 180 SEDTSKENSKGSEVQNQ-KPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPG 238
           S+ T+   + G+  Q Q KP+   VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP 
Sbjct: 109 SQATASATTGGATAQPQTKPK---VRARRGQATDPHSIAERLRRERIAERMKSLQELVPN 165

Query: 239 CNKIAGKAGMLDEIINYVQSLQRQVEFLSM 268
            NK   KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 166 GNK-TDKASMLDEIIDYVKFLQLQVKVLSM 194


>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
           chr5:23483670-23484889 REVERSE LENGTH=297
          Length = 297

 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/90 (61%), Positives = 64/90 (71%), Gaps = 8/90 (8%)

Query: 193 VQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEI 252
           V  QKP    VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP  NK   KA MLDEI
Sbjct: 92  VVRQKP---RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEI 147

Query: 253 INYVQSLQRQVEFLSMK----LAAVNPRLD 278
           I YV+ LQ QV+ LSM       +V PRL+
Sbjct: 148 IEYVRFLQLQVKVLSMSRLGGAGSVGPRLN 177


>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
           chr2:10319646-10322177 REVERSE LENGTH=350
          Length = 350

 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 1/85 (1%)

Query: 184 SKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIA 243
           S   + G  V         +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP  NK  
Sbjct: 119 SASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-T 177

Query: 244 GKAGMLDEIINYVQSLQRQVEFLSM 268
            KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 178 DKASMLDEIIDYVKFLQLQVKVLSM 202


>AT2G42300.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:17621542-17623469 FORWARD
           LENGTH=233
          Length = 233

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 36/50 (72%), Positives = 44/50 (88%)

Query: 193 VQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKI 242
           V++ K  Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ+LVPGC+K+
Sbjct: 175 VESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224


>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
           factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
          Length = 524

 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 61/89 (68%), Gaps = 3/89 (3%)

Query: 180 SEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGC 239
           SED  +E+  G   +   P    + ++R ++ + H+L+ER RR++I+E+M+ LQ+L+P C
Sbjct: 316 SEDVEEESGDGR--KEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNC 373

Query: 240 NKIAGKAGMLDEIINYVQSLQRQVEFLSM 268
           NK+  KA MLDE I Y++SLQ QV+ +SM
Sbjct: 374 NKV-DKASMLDEAIEYLKSLQLQVQIMSM 401


>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
           factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
          Length = 524

 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 61/89 (68%), Gaps = 3/89 (3%)

Query: 180 SEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGC 239
           SED  +E+  G   +   P    + ++R ++ + H+L+ER RR++I+E+M+ LQ+L+P C
Sbjct: 316 SEDVEEESGDGR--KEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNC 373

Query: 240 NKIAGKAGMLDEIINYVQSLQRQVEFLSM 268
           NK+  KA MLDE I Y++SLQ QV+ +SM
Sbjct: 374 NKV-DKASMLDEAIEYLKSLQLQVQIMSM 401


>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
           3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
          Length = 407

 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 173 NRNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYL 232
           +R  +E    T+ E    SE   Q         +R +A + H+L+ER RR++I+ERMK L
Sbjct: 178 DRKRKEREATTTDETESRSEETKQA-RVSTTSTKRSRAAEVHNLSERKRRDRINERMKAL 236

Query: 233 QDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSM 268
           Q+L+P CNK + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 237 QELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 271


>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
           5 | chr2:8704276-8706538 REVERSE LENGTH=478
          Length = 478

 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 173 NRNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYL 232
           +R  +E    T+ E    SE   Q         +R +A + H+L+ER RR++I+ERMK L
Sbjct: 249 DRKRKEREATTTDETESRSEETKQA-RVSTTSTKRSRAAEVHNLSERKRRDRINERMKAL 307

Query: 233 QDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSM 268
           Q+L+P CNK + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 308 QELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 342


>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
           5 | chr2:8704525-8706538 REVERSE LENGTH=478
          Length = 478

 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 60/96 (62%), Gaps = 2/96 (2%)

Query: 173 NRNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYL 232
           +R  +E    T+ E    SE   Q         +R +A + H+L+ER RR++I+ERMK L
Sbjct: 249 DRKRKEREATTTDETESRSEETKQA-RVSTTSTKRSRAAEVHNLSERKRRDRINERMKAL 307

Query: 233 QDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSM 268
           Q+L+P CNK + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 308 QELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 342


>AT4G28790.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr4:14218329-14220173 FORWARD
           LENGTH=413
          Length = 413

 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 21/157 (13%)

Query: 171 CTNRNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMK 230
            T+   R+T E+T+ EN    E ++         ++R +A   H L+ER RR+KI+E MK
Sbjct: 245 ITDERKRKTREETNVENQGTEEARDS------TSSKRSRAAIMHKLSERRRRQKINEMMK 298

Query: 231 YLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNIDELFVKEV 289
            LQ+L+P C K   ++ MLD++I YV+SLQ Q++  SM    + P +   NI +      
Sbjct: 299 ALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMMYAGNIQQ------ 351

Query: 290 FPACAQSFPSIGMQSDMTNHPAYLQFNSAQQLVSYCG 326
                Q  P + M   M   PA++ F     +    G
Sbjct: 352 -----QYMPHMAM--GMNRPPAFIPFPRQAHMAEGVG 381


>AT1G51140.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:18943802-18945613 REVERSE
           LENGTH=379
          Length = 379

 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 44/64 (68%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
           +RA+RG AT   S+AER+RR KISERM+ LQDLVP  +     A MLD  + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363

Query: 263 VEFL 266
           V+ L
Sbjct: 364 VKAL 367


>AT2G42280.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:17611428-17613163 REVERSE
           LENGTH=359
          Length = 359

 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 47/65 (72%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
           +RA+RG AT   S+AER+RR +ISERM+ LQ+LVP  +K    + MLD  ++Y++ LQRQ
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338

Query: 263 VEFLS 267
            + L+
Sbjct: 339 YKILN 343


>AT4G09180.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr4:5847513-5849500 FORWARD
           LENGTH=262
          Length = 262

 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 48/67 (71%)

Query: 201 IHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQ 260
             VRA+RG AT   S+AER+RR +IS+R++ LQ+LVP  +K    A ML+E + YV+ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241

Query: 261 RQVEFLS 267
           RQ++ L+
Sbjct: 242 RQIQELT 248


>AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:1137968-1140306
           REVERSE LENGTH=310
          Length = 310

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 9/87 (10%)

Query: 190 GSEVQNQKPEYIH--------VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNK 241
           G  +Q   P   H        VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP  NK
Sbjct: 125 GQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK 184

Query: 242 IAGKAGMLDEIINYVQSLQRQVEFLSM 268
              +A M+DEI++YV+ L+ QV+ LSM
Sbjct: 185 -TDRAAMIDEIVDYVKFLRLQVKVLSM 210


>AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:1137968-1140306
           REVERSE LENGTH=310
          Length = 310

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 9/87 (10%)

Query: 190 GSEVQNQKPEYIH--------VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNK 241
           G  +Q   P   H        VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP  NK
Sbjct: 125 GQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK 184

Query: 242 IAGKAGMLDEIINYVQSLQRQVEFLSM 268
              +A M+DEI++YV+ L+ QV+ LSM
Sbjct: 185 -TDRAAMIDEIVDYVKFLRLQVKVLSM 210


>AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:1137968-1140117
           REVERSE LENGTH=247
          Length = 247

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 9/87 (10%)

Query: 190 GSEVQNQKPEYIH--------VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNK 241
           G  +Q   P   H        VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP  NK
Sbjct: 62  GQPMQQPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK 121

Query: 242 IAGKAGMLDEIINYVQSLQRQVEFLSM 268
              +A M+DEI++YV+ L+ QV+ LSM
Sbjct: 122 -TDRAAMIDEIVDYVKFLRLQVKVLSM 147


>AT1G03040.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:704279-706457 REVERSE
           LENGTH=297
          Length = 297

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 1/66 (1%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
           VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP  NK   +A M+DEI++YV+ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 197

Query: 263 VEFLSM 268
           V+ LSM
Sbjct: 198 VKVLSM 203


>AT1G03040.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:704279-706457 REVERSE
           LENGTH=302
          Length = 302

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 55/66 (83%), Gaps = 1/66 (1%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
           VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP  NK   +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202

Query: 263 VEFLSM 268
           V+ LSM
Sbjct: 203 VKVLSM 208


>AT1G35460.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:13040092-13041907 FORWARD
           LENGTH=259
          Length = 259

 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 48/65 (73%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
           VRA+RG AT   S+AER+RR +IS+R++ LQ+LVP  +K    A ML+E + YV++LQ Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240

Query: 263 VEFLS 267
           ++ L+
Sbjct: 241 IQELT 245


>AT4G28815.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr4:14228719-14230288 FORWARD
           LENGTH=307
          Length = 307

 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 2/70 (2%)

Query: 206 RRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQV-E 264
           +R +A + H+LAER RREKI+ERMK LQ L+P CNK + K  ML+++I YV+SL+ Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNK-STKVSMLEDVIEYVKSLEMQINQ 205

Query: 265 FLSMKLAAVN 274
           F+      +N
Sbjct: 206 FMPHMAMGMN 215


>AT4G28790.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr4:14218329-14219887 FORWARD
           LENGTH=340
          Length = 340

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 7/100 (7%)

Query: 171 CTNRNSRETSEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMK 230
            T+   R+T E+T+ EN    E ++         ++R +A   H L+ER RR+KI+E MK
Sbjct: 245 ITDERKRKTREETNVENQGTEEARDS------TSSKRSRAAIMHKLSERRRRQKINEMMK 298

Query: 231 YLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKL 270
            LQ+L+P C K   ++ MLD++I YV+SLQ Q++   +++
Sbjct: 299 ALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQGKHLRI 337


>AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-like
           1 | chr2:19295617-19297678 REVERSE LENGTH=416
          Length = 416

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 7/103 (6%)

Query: 178 ETSEDTSKENSKGSEVQNQKPEYIHVRAR-----RGQATDSHSLAERIRREKISERMKYL 232
           E  E T   N+   E  + K + +H R R     R ++T+ H L ER RR++ +++M+ L
Sbjct: 194 EEEESTYLSNNSDDESDDAKTQ-VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRAL 252

Query: 233 QDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP 275
           QDL+P C K   KA +LDE I Y+++LQ QV+ +SM    + P
Sbjct: 253 QDLLPNCYK-DDKASLLDEAIKYMRTLQLQVQMMSMGNGLIRP 294


>AT4G28800.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr4:14221970-14224075 FORWARD
           LENGTH=445
          Length = 445

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 13/101 (12%)

Query: 206 RRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVE- 264
           +R +  + H+LAER RREKI+E+MK LQ L+P CNK + K   LD+ I YV+SLQ Q++ 
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNK-STKVSTLDDAIEYVKSLQSQIQG 310

Query: 265 FLSMKLAAVNPR-------LDFNIDELFVKEVFPACAQSFP 298
            +S  + A N +       +D N    F+   FP    SFP
Sbjct: 311 MMSPMMNAGNTQQFMPHMAMDMNRPPPFIP--FPGT--SFP 347


>AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 |
           chr4:16239566-16241052 REVERSE LENGTH=352
          Length = 352

 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 3/99 (3%)

Query: 171 CTNRNSRETSEDTSKENSKGSEVQNQKPEYIH--VRARRGQATDSHSLAERIRREKISER 228
           CT   S    +D   E+S   E    K   ++   RA RG ATD  SL  R RRE+I+ER
Sbjct: 232 CTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINER 291

Query: 229 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLS 267
           ++ LQ+LVP   K+   + ML+E ++YV+ LQ Q++ LS
Sbjct: 292 LRILQNLVPNGTKV-DISTMLEEAVHYVKFLQLQIKLLS 329


>AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 |
           chr1:9654753-9655806 FORWARD LENGTH=258
          Length = 258

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
            RA +G ATD  SL  R RREKI+ER+K LQ+LVP   K+   + ML+E ++YV+ LQ Q
Sbjct: 167 TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKV-DISTMLEEAVHYVKFLQLQ 225

Query: 263 VEFLS 267
           ++ LS
Sbjct: 226 IKLLS 230


>AT2G43010.1 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting
           factor 4 | chr2:17887003-17888823 FORWARD LENGTH=430
          Length = 430

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 32/157 (20%)

Query: 206 RRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEF 265
           RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K   KA +LDE I+Y++SLQ Q++ 
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312

Query: 266 L-------------SMKLAAVNPRLDFNIDELFVKEV-FPACAQSFPSIGMQSDMTNHPA 311
           +              M    V P       + F++++  P     FP +  QS + N+P 
Sbjct: 313 MWMGSGMAAAAASAPMMFPGVQP-------QQFIRQIQSPVQLPRFPVMD-QSAIQNNPG 364

Query: 312 YLQFNSAQ-QLVS-----YCGGLVN---NTEIIPTDM 339
            +  N  Q Q++S     Y GG  +    T++ P +M
Sbjct: 365 LVCQNPVQNQIISDRFARYIGGFPHMQAATQMQPMEM 401


>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:17863-19848
           FORWARD LENGTH=399
          Length = 399

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 1/65 (1%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
           V  +R +A   H+ +ER RR+KI++RMK LQ LVP  +K   KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKT-DKASMLDEVIEYLKQLQAQ 265

Query: 263 VEFLS 267
           V  +S
Sbjct: 266 VSMMS 270


>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:17414167-17415945
           FORWARD LENGTH=373
          Length = 373

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)

Query: 209 QATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSM 268
           +A + H+L+E+ RR +I+E+MK LQ L+P  NK   KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255

Query: 269 K 269
           +
Sbjct: 256 R 256


>AT2G43010.2 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting
           factor 4 | chr2:17887003-17888823 FORWARD LENGTH=428
          Length = 428

 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 29/143 (20%)

Query: 206 RRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEF 265
           RR +A + H+L+ER RR++I+ERMK LQ+L+P C+K   KA +LDE I+Y++SLQ Q++ 
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312

Query: 266 L-------------SMKLAAVNPRLDFNIDELFVKEV-FPACAQSFPSIGMQSDMTNHPA 311
           +              M    V P       + F++++  P     FP +  QS + N+P 
Sbjct: 313 MWMGSGMAAAAASAPMMFPGVQP-------QQFIRQIQSPVQLPRFPVMD-QSAIQNNPG 364

Query: 312 YLQFNSAQ-QLVS-----YCGGL 328
            +  N  Q Q++S     Y GG 
Sbjct: 365 LVCQNPVQNQIISDRFARYIGGF 387


>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr5:26785332-26786338
           REVERSE LENGTH=210
          Length = 210

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 10/85 (11%)

Query: 214 HSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLS------ 267
           H+L+E+ RR KI+E+MK LQ L+P  NK   KA MLDE I Y++ LQ QV+ L+      
Sbjct: 98  HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156

Query: 268 ---MKLAAVNPRLDFNIDELFVKEV 289
              M+L  V P     I+E   +++
Sbjct: 157 LNPMRLPQVPPPTHTRINETLEQDL 181


>AT2G43140.2 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:17931680-17935639 REVERSE
           LENGTH=309
          Length = 309

 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 42/64 (65%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
            RA+RG AT   S+AER RR +IS ++K LQ+LVP  +K    A MLD  + +++ LQ Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290

Query: 263 VEFL 266
           VE L
Sbjct: 291 VESL 294


>AT2G14760.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:6321840-6323312 REVERSE
           LENGTH=328
          Length = 328

 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 4/84 (4%)

Query: 184 SKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIA 243
           SKE+ + S+  N   +    RA RG ATD  SL  R RRE+I+ER++ LQ LVP   K+ 
Sbjct: 221 SKEDGEDSKALNLNGK---TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKV- 276

Query: 244 GKAGMLDEIINYVQSLQRQVEFLS 267
             + ML+E + YV+ LQ Q++ LS
Sbjct: 277 DISTMLEEAVQYVKFLQLQIKLLS 300


>AT2G43140.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:17932376-17935639 REVERSE
           LENGTH=297
          Length = 297

 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 41/62 (66%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
            RA+RG AT   S+AER RR +IS ++K LQ+LVP  +K    A MLD  + +++ LQ Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292

Query: 263 VE 264
           VE
Sbjct: 293 VE 294


>AT1G05805.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr1:1744843-1747427 FORWARD
           LENGTH=362
          Length = 362

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 43/64 (67%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
           +RA+RG AT   S+AER RR +IS ++K LQDLVP  +K    + MLD  + +++ LQ Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342

Query: 263 VEFL 266
           ++ L
Sbjct: 343 LQNL 346


>AT3G59060.4 | Symbols: PIL6, PIF5 | phytochrome interacting factor
           3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
          Length = 444

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 35/152 (23%)

Query: 205 ARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVE 264
            RR +A + H+L+ER RR++I+ERMK LQ+L+P C++   KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310

Query: 265 FLSMKLAAVNPRLDFNIDELFVKEVFPACAQSFPSI---GMQSDM-------------TN 308
            + M        +           +FP   QS P I    MQS M              N
Sbjct: 311 VMWMGSG-----MAAAAAAAASPMMFPGV-QSSPYINQMAMQSQMQLSQFPVMNRSAPQN 364

Query: 309 HPAYLQFNSAQ------------QLVSYCGGL 328
           HP  +  N  Q            QL  Y GG+
Sbjct: 365 HPGLVCQNPVQLQLQAQNQILSEQLARYMGGI 396


>AT3G59060.3 | Symbols: PIL6, PIF5 | phytochrome interacting factor
           3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
          Length = 444

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 35/152 (23%)

Query: 205 ARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVE 264
            RR +A + H+L+ER RR++I+ERMK LQ+L+P C++   KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310

Query: 265 FLSMKLAAVNPRLDFNIDELFVKEVFPACAQSFPSI---GMQSDM-------------TN 308
            + M        +           +FP   QS P I    MQS M              N
Sbjct: 311 VMWMGSG-----MAAAAAAAASPMMFPGV-QSSPYINQMAMQSQMQLSQFPVMNRSAPQN 364

Query: 309 HPAYLQFNSAQ------------QLVSYCGGL 328
           HP  +  N  Q            QL  Y GG+
Sbjct: 365 HPGLVCQNPVQLQLQAQNQILSEQLARYMGGI 396


>AT3G59060.2 | Symbols: PIL6, PIF5 | phytochrome interacting factor
           3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
          Length = 444

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 35/152 (23%)

Query: 205 ARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVE 264
            RR +A + H+L+ER RR++I+ERMK LQ+L+P C++   KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310

Query: 265 FLSMKLAAVNPRLDFNIDELFVKEVFPACAQSFPSI---GMQSDM-------------TN 308
            + M        +           +FP   QS P I    MQS M              N
Sbjct: 311 VMWMGSG-----MAAAAAAAASPMMFPGV-QSSPYINQMAMQSQMQLSQFPVMNRSAPQN 364

Query: 309 HPAYLQFNSAQ------------QLVSYCGGL 328
           HP  +  N  Q            QL  Y GG+
Sbjct: 365 HPGLVCQNPVQLQLQAQNQILSEQLARYMGGI 396


>AT3G59060.1 | Symbols: PIL6, PIF5 | phytochrome interacting factor
           3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=442
          Length = 442

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 73/152 (48%), Gaps = 35/152 (23%)

Query: 205 ARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVE 264
            RR +A + H+L+ER RR++I+ERMK LQ+L+P C++   KA +LDE I+Y++SLQ Q++
Sbjct: 252 TRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQ 310

Query: 265 FLSMKLAAVNPRLDFNIDELFVKEVFPACAQSFPSI---GMQSDM-------------TN 308
            + M        +           +FP   QS P I    MQS M              N
Sbjct: 311 VMWMGSG-----MAAAAAAAASPMMFPGV-QSSPYINQMAMQSQMQLSQFPVMNRSAPQN 364

Query: 309 HPAYLQFNSAQ------------QLVSYCGGL 328
           HP  +  N  Q            QL  Y GG+
Sbjct: 365 HPGLVCQNPVQLQLQAQNQILSEQLARYMGGI 396


>AT3G21330.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr3:7507720-7508841 FORWARD
           LENGTH=373
          Length = 373

 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 25/127 (19%)

Query: 196 QKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINY 255
           +KP+  +V+     +TD  ++A R RRE+ISE+++ LQ LVPG  K+   A MLDE  NY
Sbjct: 266 EKPKRKNVKI----STDPQTVAARQRRERISEKIRVLQTLVPGGTKM-DTASMLDEAANY 320

Query: 256 VQSLQRQVEFLSMKLAAVNPRLD-FNIDELFVKEVFPACAQSFPSIGMQSDMTNHPAYLQ 314
           ++ L+ QV+     L  + P+LD  N+        F +   SFP          HP++L 
Sbjct: 321 LKFLRAQVK----ALENLRPKLDQTNLS-------FSSAPTSFPLF--------HPSFLP 361

Query: 315 FNSAQQL 321
             +  Q+
Sbjct: 362 LQNPNQI 368


>AT5G43175.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr5:17334261-17335234 FORWARD
           LENGTH=223
          Length = 223

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 1/65 (1%)

Query: 203 VRARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 262
            +A RG A+D  SL  R RRE+I++R+K LQ LVP   K+   + ML++ ++YV+ LQ Q
Sbjct: 132 AKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKV-DISTMLEDAVHYVKFLQLQ 190

Query: 263 VEFLS 267
           ++ LS
Sbjct: 191 IKLLS 195


>AT2G14760.3 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr2:6321840-6323312 REVERSE
           LENGTH=341
          Length = 341

 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 17/97 (17%)

Query: 184 SKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERI-------------RREKISERMK 230
           SKE+ + S+  N   +    RA RG ATD  SL  R+             RRE+I+ER++
Sbjct: 221 SKEDGEDSKALNLNGK---TRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLR 277

Query: 231 YLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLS 267
            LQ LVP   K+   + ML+E + YV+ LQ Q++ LS
Sbjct: 278 ILQHLVPNGTKV-DISTMLEEAVQYVKFLQLQIKLLS 313


>AT5G61270.2 | Symbols: PIF7 | phytochrome-interacting factor7 |
           chr5:24638873-24640031 REVERSE LENGTH=278
          Length = 278

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 8/87 (9%)

Query: 190 GSEVQNQKPEYIHVRA-------RRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKI 242
           GSE Q+ + +    R        RRG+A   H+ +ER RR++I++RM+ LQ L+P  +K 
Sbjct: 52  GSETQDTEGDEQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASK- 110

Query: 243 AGKAGMLDEIINYVQSLQRQVEFLSMK 269
           A K  +LD++I +++ LQ QV+F+S++
Sbjct: 111 ADKVSILDDVIEHLKQLQAQVQFMSLR 137


>AT5G61270.1 | Symbols: PIF7 | phytochrome-interacting factor7 |
           chr5:24638873-24640439 REVERSE LENGTH=366
          Length = 366

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 8/87 (9%)

Query: 190 GSEVQNQKPEYIHVRA-------RRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKI 242
           GSE Q+ + +    R        RRG+A   H+ +ER RR++I++RM+ LQ L+P  +K 
Sbjct: 140 GSETQDTEGDEQETRGEAGRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASK- 198

Query: 243 AGKAGMLDEIINYVQSLQRQVEFLSMK 269
           A K  +LD++I +++ LQ QV+F+S++
Sbjct: 199 ADKVSILDDVIEHLKQLQAQVQFMSLR 225


>AT5G01310.1 | Symbols: APTX | APRATAXIN-like | chr5:125304-128960
           FORWARD LENGTH=912
          Length = 912

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 31/159 (19%)

Query: 204 RARRGQATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQV 263
           R+    +TD  S+A R RR +IS+R K LQ +VPG  K+     MLDE I+YV+ L+ Q+
Sbjct: 38  RSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGGAKM-DTVSMLDEAISYVKFLKAQI 96

Query: 264 EFLSMKLAAVN------------------PRLDFNIDELF--VKEVFP-------ACAQS 296
            +    L  +N                  P+L F  D+ +  + + +        A ++ 
Sbjct: 97  WYHQNMLLFINDHETTSSCTYSPGAGEFGPKL-FGYDDDYAPIMDTYSQGVPLTVADSKY 155

Query: 297 FPSIGMQSDMTNHPAYLQFNSAQQ--LVSYCGGLVNNTE 333
            P  G   D   H  Y ++  A +  L  +C  ++  TE
Sbjct: 156 TPWFGSVDDEQEHVTYFKYRRATRHALRGHCNCIIGETE 194


>AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 |
           chr1:24795326-24796598 FORWARD LENGTH=298
          Length = 298

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 212 DSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLS 267
           D  SLA + RRE+ISER+K LQ+LVP   K+     ML++ I+YV+ LQ QV+ L+
Sbjct: 204 DPQSLAAKNRRERISERLKILQELVPNGTKV-DLVTMLEKAISYVKFLQVQVKVLA 258


>AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 |
           chr5:15036197-15037574 FORWARD LENGTH=307
          Length = 307

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)

Query: 212 DSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLS 267
           D  SLA + RRE+ISER+K LQ+LVP   K+     ML++ I YV+ LQ QV+ L+
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKV-DLVTMLEKAIGYVKFLQVQVKVLA 264


>AT4G28811.1 | Symbols:  | basic helix-loop-helix (bHLH) DNA-binding
           superfamily protein | chr4:14225335-14227840 FORWARD
           LENGTH=544
          Length = 544

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 62/93 (66%), Gaps = 4/93 (4%)

Query: 177 RET--SEDTSKENSKGSEVQNQKPEYIHVRARRGQATDSHSLAERIRREKISERMKYLQD 234
           RET  +ED  +E +  +E+Q  +  +     +R +A D H+L+ER RRE+I+ERMK LQ+
Sbjct: 324 RETKITEDKKREETI-AEIQGTEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQE 382

Query: 235 LVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLS 267
           L+P C K   K  ML+++I YV+SLQ Q++ +S
Sbjct: 383 LLPRCRK-TDKVSMLEDVIEYVKSLQLQIQMMS 414


>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr5:16529457-16532866
           FORWARD LENGTH=637
          Length = 637

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 211 TDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFL 266
           T +H++ E+ RREK++ER   L+ ++P  NKI  K  +LD+ I Y+Q L+R+V+ L
Sbjct: 439 TGNHAVLEKKRREKLNERFMTLRKIIPSINKI-DKVSILDDTIEYLQELERRVQEL 493


>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr1:23599809-23602734
           FORWARD LENGTH=596
          Length = 596

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 41/58 (70%), Gaps = 1/58 (1%)

Query: 209 QATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFL 266
           + T +H+L+E+ RREK++ER   L+ ++P  +KI  K  +LD+ I Y+Q LQ++V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKI-DKVSILDDTIEYLQDLQKRVQEL 457


>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr1:23599809-23602734 FORWARD LENGTH=596
          Length = 596

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 41/58 (70%), Gaps = 1/58 (1%)

Query: 209 QATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFL 266
           + T +H+L+E+ RREK++ER   L+ ++P  +KI  K  +LD+ I Y+Q LQ++V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKI-DKVSILDDTIEYLQDLQKRVQEL 457


>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
           (bHLH) DNA-binding superfamily protein |
           chr1:23599809-23602734 FORWARD LENGTH=596
          Length = 596

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 41/58 (70%), Gaps = 1/58 (1%)

Query: 209 QATDSHSLAERIRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFL 266
           + T +H+L+E+ RREK++ER   L+ ++P  +KI  K  +LD+ I Y+Q LQ++V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKI-DKVSILDDTIEYLQDLQKRVQEL 457