Miyakogusa Predicted Gene

Lj3g3v3336270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3336270.1 Non Chatacterized Hit- tr|I1LJM3|I1LJM3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54168
PE,43.6,8e-25,coiled-coil,NULL; seg,NULL; DNA-binding pseudobarrel
domain,DNA-binding pseudobarrel domain; no desc,CUFF.45595.1
         (379 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g13350.1                                                       127   2e-29
Glyma12g05370.1                                                       111   1e-24
Glyma11g13200.2                                                        78   1e-14
Glyma11g13200.1                                                        78   1e-14
Glyma12g05240.2                                                        58   2e-08
Glyma12g05240.1                                                        58   2e-08

>Glyma11g13350.1 
          Length = 336

 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 105/172 (61%), Gaps = 11/172 (6%)

Query: 214 KKRKSHPKVCKVSSKREIGSSSVTKAEDAGHENI-DAAMYIRRDHPYFIVKLLKGRRNEL 272
           K +  H + CK    RE  SSS   AED   E + D  M I+R++ +F  KL + R NEL
Sbjct: 170 KSQSHHRRACK----RETASSSNPDAEDPLPEYVFDPEMCIQRENHFFKAKLYRTRPNEL 225

Query: 273 HIPHLIIKDFSLCF-KNKITLVCCQ-CQ--NIPRTQLRNYHGTLPQLTPANKKHTE-EGE 327
           HIP   I++FSL F +N +TL+CCQ CQ  +IP  +L +YH  L Q T   KK+ E  G 
Sbjct: 226 HIPGNSIQEFSLTFPENYVTLICCQPCQRKDIPMNELGDYHHNLTQQTHIRKKYQEVTGR 285

Query: 328 LSVWRDGRVCIKGWLHFCRKNKIKENDSCICEIVLREDQPIEMFRVHVANKK 379
           +  W+D R+CIKGW  F ++NKI+ ND+C CE++  EDQ +    VHVA ++
Sbjct: 286 VCRWQD-RICIKGWASFSKRNKIERNDTCFCEVISGEDQVVRTLEVHVARRR 336


>Glyma12g05370.1 
          Length = 130

 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 83/130 (63%), Gaps = 10/130 (7%)

Query: 257 HP---YFIVKLLKGRRNELHIPHLIIKDFSLCFKNKITLVCCQ-CQ--NIPRTQLRNYHG 310
           HP   +F  KL + R NELHIP   I++FSL    KITL+CCQ CQ  +IP  +L +YH 
Sbjct: 4   HPENHFFKAKLYRTRPNELHIPGNAIQEFSLTLPEKITLICCQPCQRKDIPMNELGDYHH 63

Query: 311 TLPQLTPANKKHTE-EGELSVWRDGRVCIKGWLHFCRKNKIKENDSCICEIVLREDQPIE 369
            L   TP   K+ E  G +  W+D R+ IKGW  FCR+NKI+ ND+C CE++  EDQ ++
Sbjct: 64  NL---TPIRIKYQEVTGIVCRWQDHRIYIKGWASFCRRNKIERNDTCFCEVISGEDQVVK 120

Query: 370 MFRVHVANKK 379
             RVHVA ++
Sbjct: 121 TLRVHVARRR 130


>Glyma11g13200.2 
          Length = 190

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 32/168 (19%)

Query: 214 KKRKSHPKVCKVSSKREIGSSSVTKAEDAGHENI-DAAMYIRRDHPYFIVKLLKGRRNEL 272
           K++  H + CK    RE  S+S   AED   E + D  M I+ ++ +F  KL K R NEL
Sbjct: 53  KRQSHHRRACK----RESASNSNPNAEDLLPEYVFDPEMCIQPENHFFKAKLYKTRPNEL 108

Query: 273 HIPHLIIKDFSLCFKNKITLVCCQCQNIPRTQLRNYHGTLPQLTPANKKHTE-EGELSVW 331
            I   ++ D               C           H  L Q T    K+ +  G +  W
Sbjct: 109 DISINLLGD---------------C-----------HHNLAQQTFIKTKYQQVSGRVCRW 142

Query: 332 RDGRVCIKGWLHFCRKNKIKENDSCICEIVLREDQPIEMFRVHVANKK 379
           +D R+ IKGW  FCR+N+I+ +D+C CE++  E+Q +   RVHVA ++
Sbjct: 143 KDYRIYIKGWDSFCRRNEIERDDTCFCEVISGEEQGVRTLRVHVARRR 190


>Glyma11g13200.1 
          Length = 190

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 32/168 (19%)

Query: 214 KKRKSHPKVCKVSSKREIGSSSVTKAEDAGHENI-DAAMYIRRDHPYFIVKLLKGRRNEL 272
           K++  H + CK    RE  S+S   AED   E + D  M I+ ++ +F  KL K R NEL
Sbjct: 53  KRQSHHRRACK----RESASNSNPNAEDLLPEYVFDPEMCIQPENHFFKAKLYKTRPNEL 108

Query: 273 HIPHLIIKDFSLCFKNKITLVCCQCQNIPRTQLRNYHGTLPQLTPANKKHTE-EGELSVW 331
            I   ++ D               C           H  L Q T    K+ +  G +  W
Sbjct: 109 DISINLLGD---------------C-----------HHNLAQQTFIKTKYQQVSGRVCRW 142

Query: 332 RDGRVCIKGWLHFCRKNKIKENDSCICEIVLREDQPIEMFRVHVANKK 379
           +D R+ IKGW  FCR+N+I+ +D+C CE++  E+Q +   RVHVA ++
Sbjct: 143 KDYRIYIKGWDSFCRRNEIERDDTCFCEVISGEEQGVRTLRVHVARRR 190


>Glyma12g05240.2 
          Length = 246

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 218 SHPKVCKVSSKREIGSSSVTKAEDAGHENI-DAAMYIRRDHPYFIVKLLKGRRNELHIPH 276
           S P  C      E  SSS   AED   E + D  M I  ++ +F  KL + R NELHIP 
Sbjct: 163 SSPTACPCLG--ETASSSNPNAEDPLPEYVFDPQMCIHPENHFFKAKLYRTRPNELHIPG 220

Query: 277 LIIKDFSLCFKNKITLVCCQ-CQ 298
             I++FSL    KITL+CCQ CQ
Sbjct: 221 NAIQEFSLTLPEKITLICCQPCQ 243


>Glyma12g05240.1 
          Length = 246

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 218 SHPKVCKVSSKREIGSSSVTKAEDAGHENI-DAAMYIRRDHPYFIVKLLKGRRNELHIPH 276
           S P  C      E  SSS   AED   E + D  M I  ++ +F  KL + R NELHIP 
Sbjct: 163 SSPTACPCLG--ETASSSNPNAEDPLPEYVFDPQMCIHPENHFFKAKLYRTRPNELHIPG 220

Query: 277 LIIKDFSLCFKNKITLVCCQ-CQ 298
             I++FSL    KITL+CCQ CQ
Sbjct: 221 NAIQEFSLTLPEKITLICCQPCQ 243