Miyakogusa Predicted Gene

Lj3g3v3336270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3336270.1 Non Chatacterized Hit- tr|I1LJM3|I1LJM3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54168
PE,43.6,8e-25,coiled-coil,NULL; seg,NULL; DNA-binding pseudobarrel
domain,DNA-binding pseudobarrel domain; no desc,CUFF.45595.1
         (379 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06160.1 | Symbols:  | AP2/B3-like transcriptional factor fam...    55   7e-08
AT3G06160.2 | Symbols:  | AP2/B3-like transcriptional factor fam...    55   8e-08
AT4G34400.1 | Symbols:  | AP2/B3-like transcriptional factor fam...    50   4e-06
AT5G60130.1 | Symbols:  | AP2/B3-like transcriptional factor fam...    49   7e-06
AT5G25470.2 | Symbols:  | AP2/B3-like transcriptional factor fam...    49   7e-06
AT5G25470.1 | Symbols:  | AP2/B3-like transcriptional factor fam...    49   7e-06
AT3G53310.1 | Symbols:  | AP2/B3-like transcriptional factor fam...    49   8e-06
AT5G60130.2 | Symbols:  | AP2/B3-like transcriptional factor fam...    48   1e-05

>AT3G06160.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr3:1864326-1867192 FORWARD LENGTH=330
          Length = 330

 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 25/111 (22%)

Query: 265 LKGRRNELHIPHLIIKDFSLCFKNKITLVCCQCQNIPRTQLRNYHGTLPQLTPANKKHTE 324
           LK R+ EL +   ++KD+ L F + +                +Y     +LT    K   
Sbjct: 237 LKLRKFELLVHAQLVKDYGLIFSDNV----------------DYIDGYGKLTAKTTK--- 277

Query: 325 EGELSVWRDGRVCIKGWLHFCRKNKIKENDSCICEIVLREDQPIEMFRVHV 375
                 W D RVCI  W   C +N+  ENDS +CEI+  ED+ +   ++H+
Sbjct: 278 ------WADQRVCINKWQKICERNQFTENDSILCEILRNEDKVVYAIKIHI 322


>AT3G06160.2 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr3:1864326-1867192 FORWARD LENGTH=374
          Length = 374

 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 25/111 (22%)

Query: 265 LKGRRNELHIPHLIIKDFSLCFKNKITLVCCQCQNIPRTQLRNYHGTLPQLTPANKKHTE 324
           LK R+ EL +   ++KD+ L F + +                +Y     +LT    K   
Sbjct: 281 LKLRKFELLVHAQLVKDYGLIFSDNV----------------DYIDGYGKLTAKTTK--- 321

Query: 325 EGELSVWRDGRVCIKGWLHFCRKNKIKENDSCICEIVLREDQPIEMFRVHV 375
                 W D RVCI  W   C +N+  ENDS +CEI+  ED+ +   ++H+
Sbjct: 322 ------WADQRVCINKWQKICERNQFTENDSILCEILRNEDKVVYAIKIHI 366


>AT4G34400.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr4:16445323-16447596 FORWARD LENGTH=397
          Length = 397

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 26/115 (22%)

Query: 265 LKGRRNELHIPHLIIKDFSLCFKNKITLVCCQCQNIPRTQLRNYHGTLPQLTPANKKHTE 324
           +K R  EL +   ++KD+ L F + +                NY     +L+    K   
Sbjct: 307 VKNRLYELLVHAQLVKDYCLRFGDYV----------------NYIDRFGKLSAKTAK--- 347

Query: 325 EGELSVWRDGRVCIKGWLHFCRKNKIKENDSCICEIVLREDQPIEMFRVHVANKK 379
                 W+D RVCIK W+  C++NK+K+ D  +CE+ LR+   +   ++HV   K
Sbjct: 348 ------WKDQRVCIKRWMRICKRNKLKKEDRILCEL-LRKGTFVYAIKLHVIRGK 395


>AT5G60130.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr5:24211871-24212958 REVERSE LENGTH=300
          Length = 300

 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 22/122 (18%)

Query: 255 RDHPYFIVKLLKGRRNELHIPHLIIKDFSLCFKNKITLVCCQCQNIPRTQLRNYHGTLPQ 314
           R++P F + L   ++++L IP  +IKD+ L F   ITLV           L    GTL  
Sbjct: 197 RENPSFTLILNPKKKSQLLIPARVIKDYDLHFPESITLV---------DPLVKKFGTL-- 245

Query: 315 LTPANKKHTEEGELSVWRDGRVCIKGWLHFCRKNKIKENDSCICEIVLREDQP-IEMFRV 373
                     E ++ +  +G V +KG+    R+NK+K  D  I EI    D   ++  ++
Sbjct: 246 ----------EKQIKIQTNGSVFVKGFGSIIRRNKVKTTDKMIFEIKKTGDNNLVQTIKI 295

Query: 374 HV 375
           H+
Sbjct: 296 HI 297


>AT5G25470.2 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr5:8865854-8867234 REVERSE LENGTH=280
          Length = 280

 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 25/123 (20%)

Query: 257 HPYFIVKLLKGRRNELHIPHLIIKDFSLCFKNKITLVCCQCQNIPRTQLRNYHGTLPQLT 316
           +PYF+  L KG  + L++P  +IK + L F              P     +Y      L 
Sbjct: 181 NPYFVKTLTKGN-DVLYVPKTVIKKYGLKFG-------------PHLSPMHY------LL 220

Query: 317 PANKKHTEEGELSVWRDGRV-CIKGWLHFCRKNKIKENDSCICEIVLREDQPIEMFRVHV 375
           P +K +   G   ++  G   C  GW+  CRK  +K  DS +CE+  R  + +   RVH 
Sbjct: 221 PGDKIN---GSTKIYGGGSAPCFNGWVDLCRKYNLKTGDSMVCELE-RSGELVTAVRVHF 276

Query: 376 ANK 378
            NK
Sbjct: 277 INK 279


>AT5G25470.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr5:8865854-8867234 REVERSE LENGTH=280
          Length = 280

 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 25/123 (20%)

Query: 257 HPYFIVKLLKGRRNELHIPHLIIKDFSLCFKNKITLVCCQCQNIPRTQLRNYHGTLPQLT 316
           +PYF+  L KG  + L++P  +IK + L F              P     +Y      L 
Sbjct: 181 NPYFVKTLTKGN-DVLYVPKTVIKKYGLKFG-------------PHLSPMHY------LL 220

Query: 317 PANKKHTEEGELSVWRDGRV-CIKGWLHFCRKNKIKENDSCICEIVLREDQPIEMFRVHV 375
           P +K +   G   ++  G   C  GW+  CRK  +K  DS +CE+  R  + +   RVH 
Sbjct: 221 PGDKIN---GSTKIYGGGSAPCFNGWVDLCRKYNLKTGDSMVCELE-RSGELVTAVRVHF 276

Query: 376 ANK 378
            NK
Sbjct: 277 INK 279


>AT3G53310.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr3:19766927-19768368 REVERSE LENGTH=286
          Length = 286

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 27/123 (21%)

Query: 257 HPYFIVKLLKGRRNELHIPHLIIKDFSLCFKNKITLVCCQCQNIPRTQLRNYHGTLPQLT 316
           +P+F   L K R  EL IP  ++KD +L F + I  +             +  GTL  L 
Sbjct: 188 NPHFPTTL-KNRIYELLIPANVVKDNNLEFGSSIKYI-------------DGEGTLVGLR 233

Query: 317 PANKKHTEEGELSVWRDGRVCIKGWLHFCRKNKIKEN-DSCICEIVLREDQPIEMFRVHV 375
                         W D RVC KGW   CR+N++K++ D+  CE++  + + +   RVHV
Sbjct: 234 ------------GKWADKRVCFKGWDRICRRNRLKKHQDTVECELLHDDQKMVHSIRVHV 281

Query: 376 ANK 378
             +
Sbjct: 282 LRR 284


>AT5G60130.2 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr5:24211871-24213112 REVERSE LENGTH=300
          Length = 300

 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 22/124 (17%)

Query: 255 RDHPYFIVKLLKGRRNELHIPHLIIKDFSLCFKNKITLVCCQCQNIPRTQLRNYHGTLPQ 314
           R++P F + L   ++++L IP  +IKD+ L F   ITLV           L    GTL  
Sbjct: 197 RENPSFTLILNPKKKSQLLIPARVIKDYDLHFPESITLV---------DPLVKKFGTL-- 245

Query: 315 LTPANKKHTEEGELSVWRDGRVCIKGWLHFCRKNKIKENDSCICEIVLREDQP-IEMFRV 373
                     E ++ +  +G V +KG+    R+NK+K  D  I EI    D   ++  ++
Sbjct: 246 ----------EKQIKIQTNGSVFVKGFGSIIRRNKVKTTDKMIFEIKKTGDNNLVQTIKI 295

Query: 374 HVAN 377
           H+ +
Sbjct: 296 HIIS 299