Miyakogusa Predicted Gene

Lj3g3v3259390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3259390.1 Non Characterized Hit- tr|A5AXB0|A5AXB0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.01,0.0000000000004,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.45531.1
         (334 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g065980.1 | hypothetical protein | HC | chr4:24849232-2484...   478   e-135
Medtr2g098340.1 | hypothetical protein | HC | chr2:42041150-4204...   459   e-129
Medtr3g104820.1 | hypothetical protein | HC | chr3:48317619-4831...   101   1e-21

>Medtr4g065980.1 | hypothetical protein | HC |
           chr4:24849232-24844548 | 20130731
          Length = 489

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 246/340 (72%), Positives = 264/340 (77%), Gaps = 7/340 (2%)

Query: 1   MVNALTKTRLQDGFVSYPWERRMHELLSVPNSSNFLSILLLPRASDMNASHYNDLEDTXX 60
           MVN LTKTR+QDGFVSYPWERRM ELLSVPNSSNFLSILLLP+ASD  AS YND+EDT  
Sbjct: 151 MVNELTKTRIQDGFVSYPWERRMQELLSVPNSSNFLSILLLPKASDRVASRYNDVEDTLA 210

Query: 61  XXXXXXXXXXXSGVPIVFMNIQTESLLTKISGDTASSTVNAGSLSDLANLANVSLYGFED 120
                      SGVPIVFMNIQTESLLTKISG+TASSTVNAGSLSDL N+AN SLYGFED
Sbjct: 211 RANAWLNAAQASGVPIVFMNIQTESLLTKISGETASSTVNAGSLSDLCNIANASLYGFED 270

Query: 121 YHGVDIGVVRAVRLWYAPIGGEFSVEIKLKEGDAKLGFAISRTEEGFIFI-SSVTDDGQE 179
           YHGVDIGVVRA+RLWYAP+GGEFS+EIKL+E D KLGFAISRTEEGFIFI SSV D+G+E
Sbjct: 271 YHGVDIGVVRAIRLWYAPMGGEFSIEIKLREEDTKLGFAISRTEEGFIFISSSVIDEGKE 330

Query: 180 NAPATRSGLSNLYRKARNTSKLLVVSRLSNQRVLPWMVSSTGAIRCYDTVSLSQKLSLHR 239
           + PATRSGLSNLY+ A  TS+LLVVSRLSNQRVLPWMVSSTGAIRCYDTVSLSQKLSLHR
Sbjct: 331 SLPATRSGLSNLYKLATETSRLLVVSRLSNQRVLPWMVSSTGAIRCYDTVSLSQKLSLHR 390

Query: 240 HTNVPILLHVFLWDRASLTSSNAESTKLRAXXXXXXXXXXXXXXASHPNENQIQPFPQE- 298
           HT VPILLHVFLWDR   TSS AESTK +               A  PNENQIQP   E 
Sbjct: 391 HTKVPILLHVFLWDRTMATSS-AESTKSKPLSSSVLPSPPQIQLAHRPNENQIQPLSCEG 449

Query: 299 ---XXXXXXXXXXXXQLERGTAGDLSFRFHDLSLSSS-WV 334
                           LERG  GD+SFRF D SLSS+ W+
Sbjct: 450 SDPSDINISDSSQPTHLERGAVGDVSFRFQDFSLSSTNWI 489


>Medtr2g098340.1 | hypothetical protein | HC |
           chr2:42041150-42045089 | 20130731
          Length = 482

 Score =  459 bits (1181), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 235/337 (69%), Positives = 261/337 (77%), Gaps = 6/337 (1%)

Query: 1   MVNALTKTRLQDGFVSYPWERRMHELLSVPNSSNFLSILLLPRASDMNASHYNDLEDTXX 60
           MVNALT+T+LQDG+VSYPWERRM E+L+VPNSSNFLSILLLP+ASD  AS YNDLEDT  
Sbjct: 149 MVNALTRTKLQDGYVSYPWERRMQEMLTVPNSSNFLSILLLPKASDRVASRYNDLEDTLA 208

Query: 61  XXXXXXXXXXXSGVPIVFMNIQTESLLTKISGDTASSTVNAGSLSDLANLANVSLYGFED 120
                      SGVPIVFMNIQTESLLTKISG+TAS+TVNAGSLSDL+NLANVSLYGFED
Sbjct: 209 RANAWINAGQASGVPIVFMNIQTESLLTKISGETASATVNAGSLSDLSNLANVSLYGFED 268

Query: 121 YHGVDIGVVRAVRLWYAPIGGEFSVEIKLKEGDAKLGFAISRTEEGFIFISSVTDDGQEN 180
           YHG+DIGVVRAVRLWYAP+GGE S+EIKLKE D+KLGFAISRTEEGFIFISSV +  QEN
Sbjct: 269 YHGIDIGVVRAVRLWYAPVGGELSIEIKLKEEDSKLGFAISRTEEGFIFISSVIN--QEN 326

Query: 181 APATRSGLSNLYRKARNTSKLLVVSRLSNQRVLPWMVSSTGAIRCYDTVSLSQKLSLHRH 240
            PATRSGLS+LY+ A +T +LLVVSR+SNQ+VLPWMVSSTGAIRCYDTVSLSQKLSLHRH
Sbjct: 327 VPATRSGLSSLYKLATDTCRLLVVSRVSNQKVLPWMVSSTGAIRCYDTVSLSQKLSLHRH 386

Query: 241 TNVPILLHVFLWDRASLTSSNAESTKLRAXX-XXXXXXXXXXXXASHPNENQIQPFPQEX 299
           T VPILLHVFLWDR S+ +S+  S + RA                   NE    P P E 
Sbjct: 387 TRVPILLHVFLWDR-SMVNSSGGSNRFRALSPSALQPLPSEVQIGRFSNETHTLPLPPEA 445

Query: 300 XXXXXXXXXXXQ--LERGTAGDLSFRFHDLSLSSSWV 334
                      Q   ER TAG+ SFRFHD SLSS+WV
Sbjct: 446 SDPTDITSEVSQSRFERDTAGESSFRFHDFSLSSNWV 482


>Medtr3g104820.1 | hypothetical protein | HC |
           chr3:48317619-48315579 | 20130731
          Length = 393

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 107/244 (43%), Gaps = 19/244 (7%)

Query: 9   RLQDGFVSYPWERRMHELLSVPNSSNFLSILLLPRASDMNASHYNDLEDTXXXXXXXXXX 68
           R  +  + Y W+ ++   L   +SS   SIL +P  S+      N +  T          
Sbjct: 139 RFHEDAIKYDWKMKVGSYLPHQSSSVVSSILFMPLVSE------NCINTTTARCMTWFSA 192

Query: 69  XXXSGVPIVFMNIQTESLLTKISGDTASSTVNAGSLSDLANLANVSLYGFEDYHGVDIGV 128
              SGVP+VF+N+QTE + T +  +   +T      S L++   +              +
Sbjct: 193 AISSGVPLVFVNVQTELIPTTLVYNLNLTTTQTQEKSSLSSNQQIHFTN---------QI 243

Query: 129 VRAVRLWYAPIGGEFSVEIKLKEGDAKLGFAISRTEEGFIFISSVTDDGQENAPATRSGL 188
           +  +RLW+ P   E  +E+  +  +A+ G  I RTEEGF+ I SV  D      A R GL
Sbjct: 244 IHGIRLWFLPGLEEIPIELIPQPDEARFGMEIKRTEEGFVCIYSVMKD----TSADRGGL 299

Query: 189 SNLYRKARNTSKLLVVSRLSNQRVLPWMVSSTGAIRCYDTVSLSQKLSLHRHTNVPILLH 248
             L+ +A     LLV+SRL ++  +P  V S G + C D   +   L         I LH
Sbjct: 300 RELHEEATANGFLLVISRLDDKNTIPTSVCSDGLVHCCDHAEIKDLLISAIDQYETIQLH 359

Query: 249 VFLW 252
           V  W
Sbjct: 360 VMAW 363