Miyakogusa Predicted Gene

Lj3g3v3026750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3026750.1 Non Characterized Hit- tr|I1LRB0|I1LRB0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,91.38,0,Clathrin,Clathrin, heavy chain/VPS, 7-fold repeat;
Putative isomerase YbhE,NULL; SUBFAMILY NOT NAMED,CUFF.45151.1
         (948 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g056480.1 | vacuolar protein sorting protein | HC | chr4:2...  1689   0.0  
Medtr4g056480.2 | vacuolar protein sorting protein | HC | chr4:2...  1259   0.0  

>Medtr4g056480.1 | vacuolar protein sorting protein | HC |
           chr4:20713510-20696458 | 20130731
          Length = 958

 Score = 1689 bits (4373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 803/919 (87%), Positives = 853/919 (92%), Gaps = 2/919 (0%)

Query: 31  PRLKYQRMGGSVPSLLAADAASCIAVAERMIALGTHAGTVHILDFLGNQVKEFSAHASVV 90
           PRLKYQRMGGSVPSLLA DAASC++VAERMIALGT AGT+HILDFLGNQVKEFSAHASVV
Sbjct: 41  PRLKYQRMGGSVPSLLATDAASCVSVAERMIALGTQAGTIHILDFLGNQVKEFSAHASVV 100

Query: 91  NDLNFDIEGEYIGSCSDDGSVVINSLFTDEKMKFEYHRPMKAIALDPEYARKMSRRFVAG 150
           NDL+FD+EGEYIGSCSDDG+VVINSLFTDE MKFEYHRPMKAIALDP+YARK SR F+AG
Sbjct: 101 NDLSFDLEGEYIGSCSDDGTVVINSLFTDEVMKFEYHRPMKAIALDPDYARKTSRSFIAG 160

Query: 151 GLAGHLYLNSKKWLGYRDQVLHSGEGSIHAVKWRASLVAWANDAGVKVYDTANEQRVTFI 210
           GLAG+LYLNSKKWLGYRDQVLHSGEGSIHAVKWRASLVAWAND GVKVYDTAN++R+TFI
Sbjct: 161 GLAGNLYLNSKKWLGYRDQVLHSGEGSIHAVKWRASLVAWANDVGVKVYDTANDRRITFI 220

Query: 211 ERPRASPRPELLLPHLVWQDDTLLVIGWGTSIKIASIKTNSYKAVNGTFRQVPLSSMTQV 270
           ERPR  P PELL+PHLVWQDDT+LVIGWGTS+KIASIKTN +K+ NG + QVP+  MTQV
Sbjct: 221 ERPRGCPHPELLIPHLVWQDDTVLVIGWGTSVKIASIKTNHHKSTNGAYLQVPVLGMTQV 280

Query: 271 DIVASFQTSYFISGIAPFGDALVVLAYIPGEEDGDKDFSSTAPSRQGNGQRPEVRIVTWN 330
           DIVASFQTSYFISG+APFGD+LVVLAYIPGEEDG+KDFSSTAPSRQGN QRPEVR+V+WN
Sbjct: 281 DIVASFQTSYFISGLAPFGDSLVVLAYIPGEEDGEKDFSSTAPSRQGNAQRPEVRVVSWN 340

Query: 331 NDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKP 390
           NDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKP
Sbjct: 341 NDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKP 400

Query: 391 RDTEDHIAWLLQHGWHEKALAVVESGQGRSELLDEVGSRYLDHLIVERKYGEAASLCPKL 450
           RDTEDHIAWLLQHGWHEKALAVVES  GRSELLDEVGSRYLDHLIVERKYGEAASLCPKL
Sbjct: 401 RDTEDHIAWLLQHGWHEKALAVVESSHGRSELLDEVGSRYLDHLIVERKYGEAASLCPKL 460

Query: 451 LQGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVSLVALATNPSFHKDLLST 510
           L+GS SAWERWVFHFAHLRQLPVLVPYMPTENPRL DTAYEV+LVALATN SFH DLLST
Sbjct: 461 LRGSGSAWERWVFHFAHLRQLPVLVPYMPTENPRLSDTAYEVALVALATNQSFHNDLLST 520

Query: 511 VKSWPSVIYSALPVISAIEPQLSTSSMTDSLKEALAELYVIDGQYEKAFSLYADLMKPEV 570
           VKSWPSVIYSALPVISAIEPQL+TSSMTDSLKEALAELYVIDGQYEKA+SLYADL+KPEV
Sbjct: 521 VKSWPSVIYSALPVISAIEPQLNTSSMTDSLKEALAELYVIDGQYEKAYSLYADLLKPEV 580

Query: 571 FDFIDKHNLHDAIREKVVQLMMLDCKRAVPLLIQNRDITSPPEVVKQLIRADNNCDCRYF 630
           FDFIDKHNLHD I+EKVVQLMMLDCKRAVPL IQNR++ SPPEVVKQL+ ADN  D R+F
Sbjct: 581 FDFIDKHNLHDVIQEKVVQLMMLDCKRAVPLYIQNRELISPPEVVKQLLNADNKSDSRHF 640

Query: 631 LHLYLHSLFEVNPHAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAHEICIKRDLM 690
           LHLYLHSLFEVNPHAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKA+EICIKRDLM
Sbjct: 641 LHLYLHSLFEVNPHAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYEICIKRDLM 700

Query: 691 REQVFILGRMGNSKQALAIIINKLGDIEEAVEFVTMQHDDELWEELIKQCLHKPEMVGIL 750
           +EQVFILGRMGN+K+ALA+IINKLGDIEEAVEFVTMQHDDELWEELIKQC+HKPEMVGIL
Sbjct: 701 KEQVFILGRMGNAKKALAVIINKLGDIEEAVEFVTMQHDDELWEELIKQCIHKPEMVGIL 760

Query: 751 LEHTVGNLDPLYIVNKVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLI 810
           LEHTVGNLDPLYIVNKVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLI
Sbjct: 761 LEHTVGNLDPLYIVNKVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLI 820

Query: 811 KYHKEARHGISLGNEEDEPRIKMSSTHAFQVSDKSPSLRIMEVKSKTRGGGRCCICFDPF 870
           KY+ EARHGISLGNE DEPR+ MS   A Q  +KS SL+ ME+KSKT GGGRCCICFDPF
Sbjct: 821 KYYNEARHGISLGNEGDEPRVNMSDHRASQAFEKSLSLKTMEMKSKTGGGGRCCICFDPF 880

Query: 871 QIQSVSVIVFFCCHGYHTTCLTDSSYTISTKKAIEVTSQEAETYDSYNGYVXXXXXXXXX 930
            IQ+VSVIVFFCCHGYHTTCLTDS YT STK++ E T +EAE YD YNGY          
Sbjct: 881 SIQNVSVIVFFCCHGYHTTCLTDSYYTSSTKES-EATPKEAEAYDDYNGYADDASDENEE 939

Query: 931 XXXG-CPRLRCILCTTATG 948
                 PR+RCILCTTA G
Sbjct: 940 ETKSDGPRMRCILCTTAAG 958


>Medtr4g056480.2 | vacuolar protein sorting protein | HC |
           chr4:20713510-20696605 | 20130731
          Length = 682

 Score = 1259 bits (3257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/683 (87%), Positives = 632/683 (92%), Gaps = 2/683 (0%)

Query: 267 MTQVDIVASFQTSYFISGIAPFGDALVVLAYIPGEEDGDKDFSSTAPSRQGNGQRPEVRI 326
           MTQVDIVASFQTSYFISG+APFGD+LVVLAYIPGEEDG+KDFSSTAPSRQGN QRPEVR+
Sbjct: 1   MTQVDIVASFQTSYFISGLAPFGDSLVVLAYIPGEEDGEKDFSSTAPSRQGNAQRPEVRV 60

Query: 327 VTWNNDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVV 386
           V+WNNDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVV
Sbjct: 61  VSWNNDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVV 120

Query: 387 IAKPRDTEDHIAWLLQHGWHEKALAVVESGQGRSELLDEVGSRYLDHLIVERKYGEAASL 446
           IAKPRDTEDHIAWLLQHGWHEKALAVVES  GRSELLDEVGSRYLDHLIVERKYGEAASL
Sbjct: 121 IAKPRDTEDHIAWLLQHGWHEKALAVVESSHGRSELLDEVGSRYLDHLIVERKYGEAASL 180

Query: 447 CPKLLQGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVSLVALATNPSFHKD 506
           CPKLL+GS SAWERWVFHFAHLRQLPVLVPYMPTENPRL DTAYEV+LVALATN SFH D
Sbjct: 181 CPKLLRGSGSAWERWVFHFAHLRQLPVLVPYMPTENPRLSDTAYEVALVALATNQSFHND 240

Query: 507 LLSTVKSWPSVIYSALPVISAIEPQLSTSSMTDSLKEALAELYVIDGQYEKAFSLYADLM 566
           LLSTVKSWPSVIYSALPVISAIEPQL+TSSMTDSLKEALAELYVIDGQYEKA+SLYADL+
Sbjct: 241 LLSTVKSWPSVIYSALPVISAIEPQLNTSSMTDSLKEALAELYVIDGQYEKAYSLYADLL 300

Query: 567 KPEVFDFIDKHNLHDAIREKVVQLMMLDCKRAVPLLIQNRDITSPPEVVKQLIRADNNCD 626
           KPEVFDFIDKHNLHD I+EKVVQLMMLDCKRAVPL IQNR++ SPPEVVKQL+ ADN  D
Sbjct: 301 KPEVFDFIDKHNLHDVIQEKVVQLMMLDCKRAVPLYIQNRELISPPEVVKQLLNADNKSD 360

Query: 627 CRYFLHLYLHSLFEVNPHAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAHEICIK 686
            R+FLHLYLHSLFEVNPHAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKA+EICIK
Sbjct: 361 SRHFLHLYLHSLFEVNPHAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEKAYEICIK 420

Query: 687 RDLMREQVFILGRMGNSKQALAIIINKLGDIEEAVEFVTMQHDDELWEELIKQCLHKPEM 746
           RDLM+EQVFILGRMGN+K+ALA+IINKLGDIEEAVEFVTMQHDDELWEELIKQC+HKPEM
Sbjct: 421 RDLMKEQVFILGRMGNAKKALAVIINKLGDIEEAVEFVTMQHDDELWEELIKQCIHKPEM 480

Query: 747 VGILLEHTVGNLDPLYIVNKVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCV 806
           VGILLEHTVGNLDPLYIVNKVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCV
Sbjct: 481 VGILLEHTVGNLDPLYIVNKVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCV 540

Query: 807 NLLIKYHKEARHGISLGNEEDEPRIKMSSTHAFQVSDKSPSLRIMEVKSKTRGGGRCCIC 866
           NLLIKY+ EARHGISLGNE DEPR+ MS   A Q  +KS SL+ ME+KSKT GGGRCCIC
Sbjct: 541 NLLIKYYNEARHGISLGNEGDEPRVNMSDHRASQAFEKSLSLKTMEMKSKTGGGGRCCIC 600

Query: 867 FDPFQIQSVSVIVFFCCHGYHTTCLTDSSYTISTKKAIEVTSQEAETYDSYNGYVXXXXX 926
           FDPF IQ+VSVIVFFCCHGYHTTCLTDS YT STK++ E T +EAE YD YNGY      
Sbjct: 601 FDPFSIQNVSVIVFFCCHGYHTTCLTDSYYTSSTKES-EATPKEAEAYDDYNGYADDASD 659

Query: 927 XXXXXXXG-CPRLRCILCTTATG 948
                     PR+RCILCTTA G
Sbjct: 660 ENEEETKSDGPRMRCILCTTAAG 682