Miyakogusa Predicted Gene

Lj3g3v3026750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3026750.1 Non Chatacterized Hit- tr|I1LRB0|I1LRB0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,91.38,0,Clathrin,Clathrin, heavy chain/VPS, 7-fold repeat;
Putative isomerase YbhE,NULL; SUBFAMILY NOT NAMED,CUFF.45151.1
         (948 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08190.1 | Symbols: ATVPS41, ZIP2, VPS41, ATVAM2, VAM2 | vacu...  1451   0.0  

>AT1G08190.1 | Symbols: ATVPS41, ZIP2, VPS41, ATVAM2, VAM2 |
           vacuolar protein sorting 41 | chr1:2567652-2573142
           FORWARD LENGTH=980
          Length = 980

 Score = 1451 bits (3755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/939 (74%), Positives = 798/939 (84%), Gaps = 25/939 (2%)

Query: 31  PRLKYQRMGGSVPSLLAADAASCIAVAERMIALGTHAGTVHILDFLGNQVKEFSAHASVV 90
           PRLKYQRMGG+VP+LL+ DAASCIAVA RMIALGTH GTV ILD LGNQVKEF AH + V
Sbjct: 42  PRLKYQRMGGNVPALLSNDAASCIAVAARMIALGTHDGTVRILDLLGNQVKEFRAHTAPV 101

Query: 91  NDLNFDIEGEYIGSCSDDGSVVINSLFTD-EKMKFEYHRPMKAIALDPEYARKMSRRFVA 149
           ND+NFD EGEYIGSCSDDGSVVINSLFTD EKMKF+YHRPMKAI+LDP+Y +K S+RFVA
Sbjct: 102 NDINFDTEGEYIGSCSDDGSVVINSLFTDDEKMKFDYHRPMKAISLDPDYTKKQSKRFVA 161

Query: 150 GGLAGHLYLNSKKWLGYRDQVLHSGEGSIHAVKWRASLVAWANDAGVKVYDTANEQRVTF 209
           GGLAGHLY+NSKKW G +DQVLHSGEG IH+VKWR SL+AWAND GVKVYDTA +QRVTF
Sbjct: 162 GGLAGHLYMNSKKWFGNKDQVLHSGEGPIHSVKWRGSLIAWANDVGVKVYDTAKDQRVTF 221

Query: 210 IERPRASPRPELLLPHLVWQDDTLLVIGWGTSIKIASIKTNSYKAVNGTFRQVPLSSMTQ 269
           IE+PR SPRPE LLPHLVWQDDTLLVIGWGTS+KIASIK++  +   GTFRQ+ +SS+TQ
Sbjct: 222 IEKPRGSPRPEALLPHLVWQDDTLLVIGWGTSVKIASIKSDQQQ--TGTFRQIQMSSLTQ 279

Query: 270 VDIVASFQTSYFISGIAPFGDALVVLAYIPGEEDGDKDFSSTAP-SRQGNGQRPEVRIVT 328
           VDIVASFQTSY+ISGIAPFGD+LV+LAYIP E DG+K+FSST   SRQGN QRPE+RIV+
Sbjct: 280 VDIVASFQTSYYISGIAPFGDSLVILAYIPIEGDGEKEFSSTTTLSRQGNAQRPEIRIVS 339

Query: 329 WNNDELSTDALPVHGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIA 388
           WNNDEL+ DALPVHGFEHYKAKDYSLAHAPF GSSYAGGQWAAGDEPLYYIVSPKDVVIA
Sbjct: 340 WNNDELTMDALPVHGFEHYKAKDYSLAHAPFPGSSYAGGQWAAGDEPLYYIVSPKDVVIA 399

Query: 389 KPRDTEDHIAWLLQHGWHEKALAVVESGQGRSELLDEVGSRYLDHLIVERKYGEAASLCP 448
           KPRD EDHI WLLQHG+HEKALA VE+ +GR+EL+D+VG+ YLDHLIVERKY EAASLCP
Sbjct: 400 KPRDAEDHINWLLQHGFHEKALAAVEASEGRTELIDKVGAGYLDHLIVERKYAEAASLCP 459

Query: 449 KLLQGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVSLVALATNPSFHKDLL 508
           KLL+GSASAWERWVFHFA LRQLPVLVPYMPT+NPRL+DT YEV+LVALATNPS+HK+LL
Sbjct: 460 KLLRGSASAWERWVFHFAQLRQLPVLVPYMPTDNPRLKDTVYEVALVALATNPSYHKELL 519

Query: 509 STVKSWPSVIYSALPVISAIEPQLSTSSMTDSLKEALAELYVIDGQYEKAFSLYADLMKP 568
           S VKSWP  +YSAL VISAIEPQL+TSSMTD+LKEALAELYVIDGQY+KAFSLYADL+KP
Sbjct: 520 SAVKSWPRSVYSALTVISAIEPQLNTSSMTDALKEALAELYVIDGQYQKAFSLYADLLKP 579

Query: 569 EVFDFIDKHNLHDAIREKVVQLMMLDCKRAVPLLIQNRDITSPPEVVKQLIRADNN---- 624
           EVFDFI+K++LH+AIR KVVQLM+LDCKRA  L IQNRD+  P EVV QL++A  N    
Sbjct: 580 EVFDFIEKYSLHEAIRGKVVQLMLLDCKRATVLFIQNRDLIPPSEVVPQLLKAGKNPQVL 639

Query: 625 -----CDCRYFLHLYLHSLFEVNPHAGKDFHDMQVELYADYDPKMLLPFLRSSQHYTLEK 679
                CD RY+L+LYLH+LFEV+   GKDFHDMQVELYA+YD KMLLPFLRSSQHY LEK
Sbjct: 640 KAGKKCDSRYYLYLYLHALFEVSHDTGKDFHDMQVELYAEYDTKMLLPFLRSSQHYKLEK 699

Query: 680 AHEICIKRDLMREQVFILGRMGNSKQALAIIINKLGDIEEAVEFVTMQHDDELWEELIKQ 739
           A+E+C+K+D +REQVF+LGRMGN+KQALA+IINKLGDIEEAVEFV+MQHDD+LWEELIKQ
Sbjct: 700 AYELCVKKDFLREQVFVLGRMGNAKQALAVIINKLGDIEEAVEFVSMQHDDDLWEELIKQ 759

Query: 740 CLHKPEMVGILLEHTVGNLDPLYIVNKVPNGLEIPRLRDRLVKIITDYRTETSLRHGCND 799
           CL+KPEMVG+LLEHTVGNLDPLYIVN VPNGLEIPRLRDRLVKI+TDYRTETSLRHGCND
Sbjct: 760 CLNKPEMVGLLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIVTDYRTETSLRHGCND 819

Query: 800 ILKADCVNLLIKYHKEARHGISLGNEEDEPRIK-----MSSTHAFQVSDKSPSLRIMEVK 854
           ILK D VNLL+K   EAR G+ L +E+D+ R K      SS     V DKS S+++ EVK
Sbjct: 820 ILKTDIVNLLVKCFNEARRGVCLSHEDDDSRAKREDNNRSSFSQRMVVDKSLSIKMTEVK 879

Query: 855 SKTRGGGRCCICFDPFQIQSVSVIVFFCCHGYHTTCLTDSSYTISTKKAIEVTSQEAETY 914
           SKTRG  RCC+CFDP  I+  +V+VFFCCH YH TCL D++++ +  K  + +S    +Y
Sbjct: 880 SKTRGDTRCCMCFDPVSIRGDTVVVFFCCHAYHETCLMDAAFSNNNHKTTKGSSGYEYSY 939

Query: 915 DSYNGYVXXXXXXXXXXXX-----GCPRLRCILCTTATG 948
           D  NG                   G  RLRCILCTTA  
Sbjct: 940 D--NGVDEEEEDEEEDEDGDGDRPGRSRLRCILCTTAAA 976