Miyakogusa Predicted Gene
- Lj3g3v3026750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3026750.1 Non Chatacterized Hit- tr|I1LRB0|I1LRB0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,91.38,0,Clathrin,Clathrin, heavy chain/VPS, 7-fold repeat;
Putative isomerase YbhE,NULL; SUBFAMILY NOT NAMED,CUFF.45151.1
(2847 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67130 similar to UniRef100_A7PQN0 Cluster: Chromosome... 884 0.0
gnl|LJGI|TC69957 similar to UniRef100_A7PQN0 Cluster: Chromosome... 841 0.0
gnl|LJGI|GO025144 similar to UniRef100_A7PQN0 Cluster: Chromosom... 537 e-151
gnl|LJGI|DC599876 homologue to UniRef100_A7PQN0 Cluster: Chromos... 168 1e-40
>gnl|LJGI|TC67130 similar to UniRef100_A7PQN0 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 736
Score = 884 bits (446), Expect = 0.0
Identities = 456/458 (99%), Gaps = 1/458 (0%)
Strand = Plus / Plus
Query: 91 ccgaggctcaagtaccagagaatgggaggcagcgtgccttcactcttagccgccgatgcc 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ccgaggctcaagtaccagagaatgggaggcagcgtgccttcactcttagccgccgatgcc 338
Query: 151 gcctcgtgtatcgccgtcgcggagcggatgatcgcactcggaactcacgccggcaccgtt 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gcctcgtgtatcgccgtcgcggagcggatgatcgcactcggaactcacgccggcaccgtt 398
Query: 211 cacatcctcgattttcttggaaatcaggtgaaagaattctctgcacatgcttctgttgtc 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cacatcctcgattttcttggaaatcaggtgaaagaattctctgcacatgcttctgttgtc 458
Query: 271 aacgacctgaactttgacatagaaggtgaatatattggaagctgttctgatgatggttca 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aacgacctgaactttgacatagaaggtgaatatattggaagctgttctgatgatggttca 518
Query: 331 gttgttataaacagccttttcactgatgagaaaatgaaattcgagtaccatcgccctatg 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gttgttataaacagccttttcactgatgagaaaatgaaattcgagtaccatcgccctatg 578
Query: 391 aaggcaattgcgttggaccccgaatatgcgaggaaaatgtctaggaggtttgttgctggt 450
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aaggcaattgcgttggaccccgaatatgcgaggaaaatgtctaggaggtttgttgctgga 638
Query: 451 ggtttagctggtcatttatatttaaattcc-aagaaatggttgggctatcgtgaccaggt 509
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 639 ggtttagctggtcatttatatttaaattccaaagaaatggttgggctatcgtgaccaggt 698
Query: 510 tttgcactctggtgaaggttcaatacatgcggttaagt 547
||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tttgcactctggtgaaggttcaatacatgcggttaagt 736
Score = 58.0 bits (29), Expect = 3e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 atggctccgatttcgtcggagaacggcgt 29
|||||||||||||||||||||||||||||
Sbjct: 189 atggctccgatttcgtcggagaacggcgt 217
>gnl|LJGI|TC69957 similar to UniRef100_A7PQN0 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 528
Score = 841 bits (424), Expect = 0.0
Identities = 424/424 (100%)
Strand = Plus / Plus
Query: 2424 tctaattaagtatcacaaagaggcaaggcatggaatttccttaggtaatgaagaagatga 2483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctaattaagtatcacaaagaggcaaggcatggaatttccttaggtaatgaagaagatga 60
Query: 2484 gccacgaatcaaaatgagcagtacccatgcttttcaggtatctgacaaatccccaagcct 2543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccacgaatcaaaatgagcagtacccatgcttttcaggtatctgacaaatccccaagcct 120
Query: 2544 gagaatcatggaggtgaagtcaaagactaggggaggtggaagatgttgcatatgttttga 2603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagaatcatggaggtgaagtcaaagactaggggaggtggaagatgttgcatatgttttga 180
Query: 2604 cccatttcaaatacagagtgtatcagtcattgttttcttttgctgtcatggttatcacac 2663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccatttcaaatacagagtgtatcagtcattgttttcttttgctgtcatggttatcacac 240
Query: 2664 aacttgtctcacggattcgtcctacacaattagtaccaagaaagcgattgaagtcacttc 2723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacttgtctcacggattcgtcctacacaattagtaccaagaaagcgattgaagtcacttc 300
Query: 2724 ccaagaggcagaaacgtatgacagctacaatggttatgtggatgatgctagtgatgatga 2783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccaagaggcagaaacgtatgacagctacaatggttatgtggatgatgctagtgatgatga 360
Query: 2784 taatgaagccaattcaggttgtcctcgcttgcgttgtatattgtgtactactgctactgg 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taatgaagccaattcaggttgtcctcgcttgcgttgtatattgtgtactactgctactgg 420
Query: 2844 ttga 2847
||||
Sbjct: 421 ttga 424
>gnl|LJGI|GO025144 similar to UniRef100_A7PQN0 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 557
Score = 537 bits (271), Expect = e-151
Identities = 274/275 (99%)
Strand = Plus / Plus
Query: 236 aggtgaaagaattctctgcacatgcttctgttgtcaacgacctgaactttgacatagaag 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 aggtgaaagaattctctgcacatgcttctgttgtcaacgacctgaactttgacatagaag 101
Query: 296 gtgaatatattggaagctgttctgatgatggttcagttgttataaacagccttttcactg 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gtgaatatattggaagctgttctgatgatggttcagttgttataaacagccttttcactg 161
Query: 356 atgagaaaatgaaattcgagtaccatcgccctatgaaggcaattgcgttggaccccgaat 415
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atgagaaaatgaaattcgagcaccatcgccctatgaaggcaattgcgttggaccccgaat 221
Query: 416 atgcgaggaaaatgtctaggaggtttgttgctggtggtttagctggtcatttatatttaa 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 atgcgaggaaaatgtctaggaggtttgttgctggtggtttagctggtcatttatatttaa 281
Query: 476 attccaagaaatggttgggctatcgtgaccaggtt 510
|||||||||||||||||||||||||||||||||||
Sbjct: 282 attccaagaaatggttgggctatcgtgaccaggtt 316
>gnl|LJGI|DC599876 homologue to UniRef100_A7PQN0 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 577
Score = 168 bits (85), Expect = 1e-40
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 2156 aggctgtagagtttgttaccatgcagcatgatgatgaactctgggaagaactaatcaagc 2215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aggctgtagagtttgttaccatgcagcatgatgatgaactctgggaagaactaatcaagc 246
Query: 2216 aatgccttcacaagcctgagatggt 2240
|||||||||||||||||||||||||
Sbjct: 247 aatgccttcacaagcctgagatggt 271
Score = 157 bits (79), Expect = 5e-37
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 2080 gtcttcatcttaggaaggatggggaactcaaaacaagccctcgccattattataaataaa 2139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcttcatcttaggaaggatggggaactcaaaacaagccctcgccattattataaataaa 60
Query: 2140 ttgggggatatagaggagg 2158
|||||||||||||||||||
Sbjct: 61 ttgggggatatagaggagg 79