Miyakogusa Predicted Gene
- Lj3g3v2923200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2923200.1 Non Characterized Hit- tr|K4C0N4|K4C0N4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,57.33,5e-19,P-loop containing nucleoside triphosphate
hydrolases,NULL; DNA REPAIR HELICASE RAD5,16,NULL;
SWI/SNF,CUFF.44996.1
(77 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g049500.1 | RING/U-box helicase | HC | chr4:17406992-17415... 117 2e-27
Medtr7g089190.1 | DNA/RNA helicase | HC | chr7:34885684-34881166... 75 2e-14
Medtr2g012830.1 | SNF2, helicase and zinc finger protein | HC | ... 71 2e-13
Medtr1g044120.1 | DNA repair helicase rad5,16, putative | HC | c... 65 1e-11
Medtr1g053955.1 | helicase | HC | chr1:22924323-22942659 | 20130731 64 3e-11
Medtr1g115215.2 | chromatin remodeling protein | HC | chr1:51892... 64 4e-11
Medtr1g115215.1 | chromatin remodeling protein | HC | chr1:51892... 64 4e-11
Medtr2g084630.1 | DNA/RNA helicase | HC | chr2:35865804-35875314... 62 1e-10
Medtr2g084630.2 | DNA/RNA helicase | HC | chr2:35865773-35875405... 62 1e-10
Medtr4g035100.3 | TATA-binding protein associated factor-like pr... 60 6e-10
Medtr4g035100.1 | TATA-binding protein associated factor-like pr... 60 6e-10
Medtr4g035100.2 | TATA-binding protein associated factor-like pr... 60 6e-10
Medtr2g020000.1 | chromatin remodeling factor, putative | HC | c... 57 4e-09
Medtr1g105050.1 | chromatin remodeling factor, putative | HC | c... 56 8e-09
Medtr4g118845.2 | chromatin remodeling factor, putative | HC | c... 55 1e-08
Medtr4g118845.1 | chromatin remodeling factor, putative | HC | c... 55 1e-08
Medtr5g005840.1 | chromatin remodeling factor, putative | HC | c... 55 1e-08
Medtr7g090960.2 | DNA helicase INO80-like protein | HC | chr7:35... 54 4e-08
Medtr7g090960.1 | DNA helicase INO80-like protein | HC | chr7:35... 54 4e-08
Medtr1g035330.1 | ATP-dependent helicase family protein | HC | c... 53 7e-08
Medtr5g020000.1 | chromatin-remodeling complex ATPase chain, put... 51 3e-07
Medtr4g118720.1 | SNF2 family amine-terminal protein | HC | chr4... 50 4e-07
Medtr5g004720.1 | DNA repair and recombination RAD54-like protei... 49 1e-06
Medtr5g067980.1 | SNF2 domain protein/helicase domain protein | ... 49 1e-06
Medtr5g067980.2 | SNF2 domain protein/helicase domain protein | ... 49 1e-06
Medtr3g106210.5 | CHD3-type chromatin-remodeling factor pickle p... 48 2e-06
Medtr3g106210.6 | CHD3-type chromatin-remodeling factor pickle p... 48 2e-06
Medtr3g106210.8 | CHD3-type chromatin-remodeling factor pickle p... 48 2e-06
Medtr3g106210.7 | CHD3-type chromatin-remodeling factor pickle p... 48 2e-06
Medtr3g106210.1 | CHD3-type chromatin-remodeling factor pickle p... 48 2e-06
Medtr3g106210.2 | CHD3-type chromatin-remodeling factor pickle p... 48 2e-06
Medtr3g106210.3 | CHD3-type chromatin-remodeling factor pickle p... 48 2e-06
Medtr3g106210.4 | CHD3-type chromatin-remodeling factor pickle p... 48 2e-06
Medtr8g094070.2 | chromatin-remodeling complex ATPase chain | HC... 48 2e-06
Medtr7g045505.1 | Nodule-specific Glycine Rich Peptide | HC | ch... 48 2e-06
Medtr8g094070.1 | chromatin-remodeling complex ATPase chain | HC... 48 2e-06
Medtr7g045505.2 | Nodule-specific Glycine Rich Peptide | HC | ch... 48 2e-06
Medtr7g039320.1 | chromodomain helicase-DNA-binding-like protein... 48 3e-06
Medtr7g039320.2 | chromodomain helicase-DNA-binding-like protein... 47 3e-06
Medtr1g013190.1 | chromatin remodeling factor CHD3 (pickle) | HC... 47 3e-06
Medtr1g080420.2 | chromatin remodeling complex subunit | HC | ch... 46 7e-06
Medtr1g080420.3 | chromatin remodeling complex subunit | HC | ch... 46 7e-06
Medtr1g080420.1 | chromatin remodeling complex subunit | HC | ch... 46 7e-06
Medtr5g090090.2 | chromodomain helicase-DNA-binding protein | HC... 46 8e-06
Medtr5g090090.1 | chromodomain helicase-DNA-binding protein | HC... 46 8e-06
Medtr1g069755.1 | DNA repair and recombination protein RAD26 | H... 46 1e-05
>Medtr4g049500.1 | RING/U-box helicase | HC | chr4:17406992-17415500
| 20130731
Length = 935
Score = 117 bits (293), Expect = 2e-27, Method: Composition-based stats.
Identities = 52/75 (69%), Positives = 65/75 (86%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSS 60
M+PWWNP VE+QAQDRIHRIGQ KPIR+V+F+ ENTIEERILKLQ++KE V EG + GSS
Sbjct: 859 MDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSS 918
Query: 61 EALGRLKLSEMINLF 75
EALG+L ++++ LF
Sbjct: 919 EALGKLTVADLKFLF 933
>Medtr7g089190.1 | DNA/RNA helicase | HC | chr7:34885684-34881166 |
20130731
Length = 822
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 42/49 (85%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKE 49
MEPWWNP VE+QA DR+HRIGQ + +++V+ I +N+IEE+IL LQ++K+
Sbjct: 745 MEPWWNPAVEEQAMDRVHRIGQKEEVKIVRLIAKNSIEEKILMLQEKKK 793
>Medtr2g012830.1 | SNF2, helicase and zinc finger protein | HC |
chr2:3311076-3321817 | 20130731
Length = 1303
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLI--DG 58
++ WWNP E QA DR HRIGQ +P+ V++ ++T+E+RIL LQQ+K + DG
Sbjct: 1225 LDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDRILALQQKKRTMVASAFGEDG 1284
Query: 59 SSEALGRLKLSEMINLF 75
+S RL + ++ LF
Sbjct: 1285 TSGRQTRLTVDDLKYLF 1301
>Medtr1g044120.1 | DNA repair helicase rad5,16, putative | HC |
chr1:16509136-16515621 | 20130731
Length = 1153
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 47/72 (65%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSS 60
M+PWWNP VE+QA RIHRIGQ + + V +FI + T+E+R+ ++Q +K+ + G +
Sbjct: 1080 MDPWWNPAVEEQAIMRIHRIGQKRRVTVRRFIVKGTVEDRLQQVQAKKQKMISGALTDDE 1139
Query: 61 EALGRLKLSEMI 72
R++ +M+
Sbjct: 1140 VRTSRIQDLKML 1151
>Medtr1g053955.1 | helicase | HC | chr1:22924323-22942659 | 20130731
Length = 2044
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLI 56
WNP ++QQAQDR HRIGQ + + + + I+E+TIEE ILK +QK A+ + +I
Sbjct: 1159 WNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKAKQKRALDDLVI 1210
>Medtr1g115215.2 | chromatin remodeling protein | HC |
chr1:51892999-51882725 | 20130731
Length = 1040
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQK 48
++ WWNP E QA DR HRIGQ +P+ V + ++T+E+RIL LQ++K
Sbjct: 962 LDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILALQEEK 1009
>Medtr1g115215.1 | chromatin remodeling protein | HC |
chr1:51892999-51882725 | 20130731
Length = 1040
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQK 48
++ WWNP E QA DR HRIGQ +P+ V + ++T+E+RIL LQ++K
Sbjct: 962 LDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILALQEEK 1009
>Medtr2g084630.1 | DNA/RNA helicase | HC | chr2:35865804-35875314 |
20130731
Length = 1022
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLI 56
M+PWWNP VE+QA RIHRIGQ K + + +FI + ++E+R+ +Q +K+ + G +
Sbjct: 949 MDPWWNPAVEEQAVMRIHRIGQTKKVAIKRFIVKGSVEQRMEAVQARKQRMISGAL 1004
>Medtr2g084630.2 | DNA/RNA helicase | HC | chr2:35865773-35875405 |
20130731
Length = 1025
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 40/56 (71%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLI 56
M+PWWNP VE+QA RIHRIGQ K + + +FI + ++E+R+ +Q +K+ + G +
Sbjct: 952 MDPWWNPAVEEQAVMRIHRIGQTKKVAIKRFIVKGSVEQRMEAVQARKQRMISGAL 1007
>Medtr4g035100.3 | TATA-binding protein associated factor-like protein
| HC | chr4:12002197-12022325 | 20130731
Length = 2046
Score = 59.7 bits (143), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA DR HR+GQ K + V + I T+EE+++ LQ+ K +V+ +I+ + +L
Sbjct: 1912 WNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASLK 1971
Query: 65 RLKLSEMINLFG 76
+ ++++LF
Sbjct: 1972 TMNTDQLLDLFA 1983
>Medtr4g035100.1 | TATA-binding protein associated factor-like protein
| HC | chr4:12002197-12022121 | 20130731
Length = 2045
Score = 59.7 bits (143), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA DR HR+GQ K + V + I T+EE+++ LQ+ K +V+ +I+ + +L
Sbjct: 1912 WNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASLK 1971
Query: 65 RLKLSEMINLFG 76
+ ++++LF
Sbjct: 1972 TMNTDQLLDLFA 1983
>Medtr4g035100.2 | TATA-binding protein associated factor-like protein
| HC | chr4:12002197-12022121 | 20130731
Length = 2045
Score = 59.7 bits (143), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 45/72 (62%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA DR HR+GQ K + V + I T+EE+++ LQ+ K +V+ +I+ + +L
Sbjct: 1912 WNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASLK 1971
Query: 65 RLKLSEMINLFG 76
+ ++++LF
Sbjct: 1972 TMNTDQLLDLFA 1983
>Medtr2g020000.1 | chromatin remodeling factor, putative | HC |
chr2:6619806-6610735 | 20130731
Length = 1066
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP V+ QAQDR HRIGQ K ++V +F TE TIEE++++ +K A+ +I G
Sbjct: 590 WNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQ-----G 644
Query: 65 RLKLSEMIN 73
RL + +N
Sbjct: 645 RLAEQKTVN 653
>Medtr1g105050.1 | chromatin remodeling factor, putative | HC |
chr1:47349899-47341180 | 20130731
Length = 1083
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQK-----EAVSEGLIDGS 59
WNP ++QQA+DR HRIGQ K +RV ++ ++EE IL+ +QK + + GL + +
Sbjct: 784 WNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQAGLFNTT 843
Query: 60 SEALGRLKLSEMI 72
S A R ++ E+I
Sbjct: 844 STAQDRREMLEVI 856
>Medtr4g118845.2 | chromatin remodeling factor, putative | HC |
chr4:49253207-49260120 | 20130731
Length = 876
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QAQDR HRIGQ K ++V +F TE TIEE++++ +K A+ +I G
Sbjct: 400 WNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQ-----G 454
Query: 65 RLKLSEMIN 73
RL + +N
Sbjct: 455 RLAEQKTVN 463
>Medtr4g118845.1 | chromatin remodeling factor, putative | HC |
chr4:49251792-49260219 | 20130731
Length = 1063
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QAQDR HRIGQ K ++V +F TE TIEE++++ +K A+ +I G
Sbjct: 587 WNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQ-----G 641
Query: 65 RLKLSEMIN 73
RL + +N
Sbjct: 642 RLAEQKTVN 650
>Medtr5g005840.1 | chromatin remodeling factor, putative | HC |
chr5:644652-653059 | 20130731
Length = 1063
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQK-----EAVSEGLIDGS 59
WNP ++QQA+DR HRIGQ K +RV ++ +IEE IL+ +QK + + GL + +
Sbjct: 770 WNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTT 829
Query: 60 SEALGRLKLSEMI 72
S A R ++ E I
Sbjct: 830 STAQDRREMLEEI 842
>Medtr7g090960.2 | DNA helicase INO80-like protein | HC |
chr7:35860856-35873661 | 20130731
Length = 1433
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 2 EPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSE 61
E WNP ++ QA DR HR+GQ K + V + I + T+EE+IL QK V ++ G S
Sbjct: 1205 ESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILLRASQKSTVQNLVMTGGSV 1264
Query: 62 ALGRLKLSEMINLF 75
L ++++L
Sbjct: 1265 GGDLLAPEDVVSLL 1278
>Medtr7g090960.1 | DNA helicase INO80-like protein | HC |
chr7:35860856-35873661 | 20130731
Length = 1514
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 2 EPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSE 61
E WNP ++ QA DR HR+GQ K + V + I + T+EE+IL QK V ++ G S
Sbjct: 1286 ESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILLRASQKSTVQNLVMTGGSV 1345
Query: 62 ALGRLKLSEMINLF 75
L ++++L
Sbjct: 1346 GGDLLAPEDVVSLL 1359
>Medtr1g035330.1 | ATP-dependent helicase family protein | HC |
chr1:12827792-12817494 | 20130731
Length = 745
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 39/57 (68%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSE 61
+NP +++QA+DR HRIGQ KP+ V + +T+ T++E + ++ ++K + +++ E
Sbjct: 667 FNPQIDRQAEDRCHRIGQTKPVTVYRLVTKGTVDENVYEIAKRKLGLDAAVLESMEE 723
>Medtr5g020000.1 | chromatin-remodeling complex ATPase chain,
putative | HC | chr5:7592986-7599103 | 20130731
Length = 750
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILK 43
WNP ++ QA DR HRIGQ KP+ V + T ++E R+LK
Sbjct: 604 WNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRMLK 642
>Medtr4g118720.1 | SNF2 family amine-terminal protein | HC |
chr4:49190490-49169826 | 20130731
Length = 3282
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERIL-----KLQQQKEAVSEGLIDGS 59
WNP V+ QAQ R HRIGQ K + V++F T T+EE++ KL ++++ G D +
Sbjct: 1422 WNPQVDLQAQARAHRIGQKKDVLVLRFETVQTVEEQVRASAEHKLGVANQSITAGFFDNN 1481
Query: 60 SEALGRLKLSEMI 72
+ A R + E +
Sbjct: 1482 TSAEDRREYLESL 1494
>Medtr5g004720.1 | DNA repair and recombination RAD54-like protein |
HC | chr5:103589-93910 | 20130731
Length = 945
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 2 EPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSE 61
+P WNP ++QA R+ R GQ K + + +F++ TIEE++ + Q KE + + + ++
Sbjct: 634 DPDWNPANDKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMAKEGLQKVIQREQND 693
Query: 62 ALGR----LKLSEMINLFGF 77
++ L ++ NLF F
Sbjct: 694 SVAAQSNFLSTEDLRNLFTF 713
>Medtr5g067980.1 | SNF2 domain protein/helicase domain protein | HC |
chr5:28736334-28720226 | 20130731
Length = 1666
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQK 48
+EP NP E QA R+HRIGQ + + +F+ ++T+EE I KL + +
Sbjct: 1549 VEPLLNPAAEAQAISRVHRIGQKQKTLIHRFLVKDTVEESIYKLNRSR 1596
>Medtr5g067980.2 | SNF2 domain protein/helicase domain protein | HC |
chr5:28736194-28720226 | 20130731
Length = 1666
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQK 48
+EP NP E QA R+HRIGQ + + +F+ ++T+EE I KL + +
Sbjct: 1549 VEPLLNPAAEAQAISRVHRIGQKQKTLIHRFLVKDTVEESIYKLNRSR 1596
>Medtr3g106210.5 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1239
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HR+GQ + + + IT TIEER++++ ++K V E L+ +G
Sbjct: 708 WNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKK-MVLEHLV------VG 760
Query: 65 RLK 67
RLK
Sbjct: 761 RLK 763
>Medtr3g106210.6 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1239
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HR+GQ + + + IT TIEER++++ ++K V E L+ +G
Sbjct: 708 WNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKK-MVLEHLV------VG 760
Query: 65 RLK 67
RLK
Sbjct: 761 RLK 763
>Medtr3g106210.8 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1238
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HR+GQ + + + IT TIEER++++ ++K V E L+ +G
Sbjct: 708 WNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKK-MVLEHLV------VG 760
Query: 65 RLK 67
RLK
Sbjct: 761 RLK 763
>Medtr3g106210.7 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1238
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HR+GQ + + + IT TIEER++++ ++K V E L+ +G
Sbjct: 708 WNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKK-MVLEHLV------VG 760
Query: 65 RLK 67
RLK
Sbjct: 761 RLK 763
>Medtr3g106210.1 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1412
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HR+GQ + + + IT TIEER++++ ++K V E L+ +G
Sbjct: 708 WNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKK-MVLEHLV------VG 760
Query: 65 RLK 67
RLK
Sbjct: 761 RLK 763
>Medtr3g106210.2 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1412
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HR+GQ + + + IT TIEER++++ ++K V E L+ +G
Sbjct: 708 WNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKK-MVLEHLV------VG 760
Query: 65 RLK 67
RLK
Sbjct: 761 RLK 763
>Medtr3g106210.3 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1411
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HR+GQ + + + IT TIEER++++ ++K V E L+ +G
Sbjct: 708 WNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKK-MVLEHLV------VG 760
Query: 65 RLK 67
RLK
Sbjct: 761 RLK 763
>Medtr3g106210.4 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1411
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HR+GQ + + + IT TIEER++++ ++K V E L+ +G
Sbjct: 708 WNPHADLQAMARAHRLGQTNKVLIYRLITRGTIEERMMQMTKKK-MVLEHLV------VG 760
Query: 65 RLK 67
RLK
Sbjct: 761 RLK 763
>Medtr8g094070.2 | chromatin-remodeling complex ATPase chain | HC |
chr8:39349649-39359572 | 20130731
Length = 1050
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQK 48
++P WNP + Q+ DR +RIGQ K + V + +T T+EE+I + Q K
Sbjct: 834 VDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTSGTVEEKIYRKQVYK 881
>Medtr7g045505.1 | Nodule-specific Glycine Rich Peptide | HC |
chr7:16014208-16021633 | 20130731
Length = 985
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVS 52
WNP V++QA R HRIGQ + + +TE+T+EE I++ ++K +S
Sbjct: 425 WNPQVDRQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLS 472
>Medtr8g094070.1 | chromatin-remodeling complex ATPase chain | HC |
chr8:39349649-39359572 | 20130731
Length = 1095
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQK 48
++P WNP + Q+ DR +RIGQ K + V + +T T+EE+I + Q K
Sbjct: 834 VDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTSGTVEEKIYRKQVYK 881
>Medtr7g045505.2 | Nodule-specific Glycine Rich Peptide | HC |
chr7:16014208-16020315 | 20130731
Length = 827
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVS 52
WNP V++QA R HRIGQ + + +TE+T+EE I++ ++K +S
Sbjct: 425 WNPQVDRQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLS 472
>Medtr7g039320.1 | chromodomain helicase-DNA-binding-like protein |
HC | chr7:14592916-14600556 | 20130731
Length = 891
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVS 52
WNP V++QA R HRIGQ + + +TE+T+EE I++ ++K +S
Sbjct: 427 WNPQVDRQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLS 474
>Medtr7g039320.2 | chromodomain helicase-DNA-binding-like protein |
HC | chr7:14592916-14600556 | 20130731
Length = 887
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVS 52
WNP V++QA R HRIGQ + + +TE+T+EE I++ ++K +S
Sbjct: 427 WNPQVDRQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLS 474
>Medtr1g013190.1 | chromatin remodeling factor CHD3 (pickle) | HC |
chr1:2920951-2909567 | 20130731
Length = 1302
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HR+GQ + + + IT TIEER++++ ++K + ++ ++ +
Sbjct: 706 WNPHADLQAMARAHRVGQTNKVLIFRLITRGTIEERMMEITKKKMVLEHVVVGRKAQNIK 765
Query: 65 RLKLSEMI 72
+ +L ++I
Sbjct: 766 QEELDDII 773
>Medtr1g080420.2 | chromatin remodeling complex subunit | HC |
chr1:35753109-35726804 | 20130731
Length = 1338
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R R GQ KP+ + + T+EE+I K Q KE ++ ++D +
Sbjct: 1094 WNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHR 1152
Query: 65 RLKLSEMINLFGF 77
+ EM++LF F
Sbjct: 1153 TISKEEMLHLFEF 1165
>Medtr1g080420.3 | chromatin remodeling complex subunit | HC |
chr1:35753109-35726804 | 20130731
Length = 1338
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R R GQ KP+ + + T+EE+I K Q KE ++ ++D +
Sbjct: 1094 WNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHR 1152
Query: 65 RLKLSEMINLFGF 77
+ EM++LF F
Sbjct: 1153 TISKEEMLHLFEF 1165
>Medtr1g080420.1 | chromatin remodeling complex subunit | HC |
chr1:35761109-35726804 | 20130731
Length = 1469
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R R GQ KP+ + + T+EE+I K Q KE ++ ++D +
Sbjct: 1225 WNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVD-RQQVHR 1283
Query: 65 RLKLSEMINLFGF 77
+ EM++LF F
Sbjct: 1284 TISKEEMLHLFEF 1296
>Medtr5g090090.2 | chromodomain helicase-DNA-binding protein | HC |
chr5:39219576-39198108 | 20130731
Length = 1563
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HRIGQ + + +F+T ++EE IL+ + +K+ V + L+ A G
Sbjct: 1031 WNPQNDLQAMSRAHRIGQQDVVNIYRFVTSKSVEEDILE-RAKKKMVLDHLVIQKLNAEG 1089
Query: 65 RLKLSEM 71
RL+ E+
Sbjct: 1090 RLEKKEV 1096
>Medtr5g090090.1 | chromodomain helicase-DNA-binding protein | HC |
chr5:39219576-39200089 | 20130731
Length = 1383
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 5 WNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLIDGSSEALG 64
WNP + QA R HRIGQ + + +F+T ++EE IL+ + +K+ V + L+ A G
Sbjct: 1031 WNPQNDLQAMSRAHRIGQQDVVNIYRFVTSKSVEEDILE-RAKKKMVLDHLVIQKLNAEG 1089
Query: 65 RLKLSEM 71
RL+ E+
Sbjct: 1090 RLEKKEV 1096
>Medtr1g069755.1 | DNA repair and recombination protein RAD26 | HC |
chr1:30420894-30427365 | 20130731
Length = 1215
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 1 MEPWWNPGVEQQAQDRIHRIGQNKPIRVVKFITENTIEERILKLQQQKEAVSEGLI 56
+P WNP + QA++R RIGQ + + + + IT TIEE++ Q K ++ ++
Sbjct: 828 FDPDWNPSTDMQARERAWRIGQKRDVTIYRLITRGTIEEKVYHRQIYKHFLTNKIL 883