Miyakogusa Predicted Gene
- Lj3g3v2923200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2923200.1 Non Chatacterized Hit- tr|K4C0N4|K4C0N4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,57.33,5e-19,P-loop containing nucleoside triphosphate
hydrolases,NULL; DNA REPAIR HELICASE RAD5,16,NULL;
SWI/SNF,CUFF.44996.1
(234 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79927 similar to UniRef100_A7PX42 Cluster: Chromosome... 464 e-130
gnl|LJGI|TC80050 similar to UniRef100_A7R047 Cluster: Chromosome... 367 e-101
>gnl|LJGI|TC79927 similar to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 638
Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 atggagccttggtggaacccaggcgtagagcaacaggctcaggatagaattcaccgaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atggagccttggtggaacccaggcgtagagcaacaggctcaggatagaattcaccgaata 165
Query: 61 gggcaaaataaacctataagagttgtgaagtttatcacagagaacaccatcgaggagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gggcaaaataaacctataagagttgtgaagtttatcacagagaacaccatcgaggagagg 225
Query: 121 attctgaagctgcagcagcagaaggaagcagtgtctgaagggctaatagacggctcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 attctgaagctgcagcagcagaaggaagcagtgtctgaagggctaatagacggctcttct 285
Query: 181 gaagctttggggagattgaaactgtccgagatgataaacctgtttggattttaa 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gaagctttggggagattgaaactgtccgagatgataaacctgtttggattttaa 339
>gnl|LJGI|TC80050 similar to UniRef100_A7R047 Cluster: Chromosome chr10 scaffold_297,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_297, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 666
Score = 367 bits (185), Expect = e-101
Identities = 227/237 (95%), Gaps = 3/237 (1%)
Strand = Plus / Plus
Query: 1 atggagccttggtggaacccaggcgtagagcaacaggctcaggatagaattcaccgaata 60
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 116 atggagccttggtggaacccagacgcagagcaacaggctcaggatagaattcaccgaata 175
Query: 61 gggcaaaataaacctataagagttgtgaagtttatcacagagaacaccatcgaggagagg 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 176 gggcaaaataaacctataagagttgtgaagtttatcacagagaacaccgtcgaggagagg 235
Query: 121 attctgaagctgcagca-gcagaaggaagca-gtgtctgaagggctaat-agacggctct 177
|||||| |||||||||| | ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 236 attctggagctgcagcacgaagaaggaagcacgtgtctgaagggctaataagacggctct 295
Query: 178 tctgaagctttggggagattgaaactgtccgagatgataaacctgtttggattttaa 234
||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 296 tctgaagctttggggagattgaaaccgtccgagatgatgaacctgtttggattttaa 352