Miyakogusa Predicted Gene
- Lj3g3v2888620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2888620.1 Non Chatacterized Hit- tr|B9FYZ5|B9FYZ5_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,75.86,5e-18,seg,NULL; DUF604,Protein of unknown function DUF604;
FRINGE-RELATED,NULL,CUFF.44906.1
(1485 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS328127 similar to UniRef100_A7PXJ8 Cluster: Chromosom... 817 0.0
gnl|LJGI|DC594683 similar to UniRef100_A7PXJ8 Cluster: Chromosom... 757 0.0
gnl|LJGI|TC67760 weakly similar to UniRef100_UPI0000162C67 Clust... 62 1e-08
>gnl|LJGI|FS328127 similar to UniRef100_A7PXJ8 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 610
Score = 817 bits (412), Expect = 0.0
Identities = 415/416 (99%)
Strand = Plus / Plus
Query: 222 atccccgtccaccgtcatcacgcgcttctccctcaccacgcgccgccacatcctcttcgc 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atccccgtccaccgtcatcacgcgcttctccctcaccacgcgccgccacatcctcttcgc 254
Query: 282 cgtcgcctcctcctccctctcctggccccgccgccagtcttatctcaacctctggtactc 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cgtcgcctcctcctccctctcctggccccgccgccagtcttatctcaacctctggtactc 314
Query: 342 cccaaacaccacccgcgcactcgccttcctcgactcaccccctcccaacaccaccaccac 401
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cccgaacaccacccgcgcactcgccttcctcgactcaccccctcccaacaccaccaccac 374
Query: 402 ctcgccgccagttatcatctccggtgaggcgtcccgcttcccctacacgttcccgggagg 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ctcgccgccagttatcatctccggtgaggcgtcccgcttcccctacacgttcccgggagg 434
Query: 462 actgcgctcggcgatccgcgtggcgcgtgtagtgaaggaggcggtcgatcggaacgagac 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 actgcgctcggcgatccgcgtggcgcgtgtagtgaaggaggcggtcgatcggaacgagac 494
Query: 522 ggatgtgcggtggttcgtgttcggcgacgacgacacggttttcttcgtggagaatgtggt 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggatgtgcggtggttcgtgttcggcgacgacgacacggttttcttcgtggagaatgtggt 554
Query: 582 gagggttttggcgaagtacgatcacaatcggtggtactaccttgggagcaactctg 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gagggttttggcgaagtacgatcacaatcggtggtactaccttgggagcaactctg 610
Score = 167 bits (84), Expect = 2e-40
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 29 aacaacaatccacttcaaccttgcctctatcacagtcgtcaccaatgcctcctcctccgc 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aacaacaatccacttcaaccttgcctctatcacagtcgtcaccaatgcctcctcctccgc 61
Query: 89 caccttcctccgccgccaccacca 112
||||||||||||||||||||||||
Sbjct: 62 caccttcctccgccgccaccacca 85
>gnl|LJGI|DC594683 similar to UniRef100_A7PXJ8 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 511
Score = 757 bits (382), Expect = 0.0
Identities = 385/386 (99%)
Strand = Plus / Plus
Query: 242 cgcgcttctccctcaccacgcgccgccacatcctcttcgccgtcgcctcctcctccctct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 cgcgcttctccctcaccacgcgccgccacatcctcttcgccgtcgcctcctcctccctct 185
Query: 302 cctggccccgccgccagtcttatctcaacctctggtactccccaaacaccacccgcgcac 361
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 186 cctggccccgccgccagtcttatctcaacctctggtactccccgaacaccacccgcgcac 245
Query: 362 tcgccttcctcgactcaccccctcccaacaccaccaccacctcgccgccagttatcatct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tcgccttcctcgactcaccccctcccaacaccaccaccacctcgccgccagttatcatct 305
Query: 422 ccggtgaggcgtcccgcttcccctacacgttcccgggaggactgcgctcggcgatccgcg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ccggtgaggcgtcccgcttcccctacacgttcccgggaggactgcgctcggcgatccgcg 365
Query: 482 tggcgcgtgtagtgaaggaggcggtcgatcggaacgagacggatgtgcggtggttcgtgt 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tggcgcgtgtagtgaaggaggcggtcgatcggaacgagacggatgtgcggtggttcgtgt 425
Query: 542 tcggcgacgacgacacggttttcttcgtggagaatgtggtgagggttttggcgaagtacg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcggcgacgacgacacggttttcttcgtggagaatgtggtgagggttttggcgaagtacg 485
Query: 602 atcacaatcggtggtactaccttggg 627
||||||||||||||||||||||||||
Sbjct: 486 atcacaatcggtggtactaccttggg 511
>gnl|LJGI|TC67760 weakly similar to UniRef100_UPI0000162C67 Cluster: fringe-related
protein; n=1; Arabidopsis thaliana|Rep: fringe-related
protein - Arabidopsis thaliana, partial (38%)
Length = 1305
Score = 61.9 bits (31), Expect = 1e-08
Identities = 94/115 (81%)
Strand = Plus / Plus
Query: 732 ggttttggattcctgtttgaagaggtatggtcatttgtatggcagtgattccaggattta 791
|||||| ||||| |||||| | ||||| |||| | ||||| |||||| |||| | ||
Sbjct: 971 ggtttttgattcgtgtttggaaaggtaccctcatctctatggaagtgatggcagggtgta 1030
Query: 792 ctcttgcattgctgagcttggtgttgggttgacccatgaacctggttttcatcag 846
||||||| | || ||||||||||| || || || |||||||||||||||||||||
Sbjct: 1031 ctcttgcttagcagagcttggtgtgggattaacacatgaacctggttttcatcag 1085