Miyakogusa Predicted Gene

Lj3g3v2888300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2888300.1 Non Chatacterized Hit- tr|I3SNX6|I3SNX6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,EF_HAND_2,EF-HAND 2; EF-hand, calcium binding
motif,Calcium-binding EF-hand; EF-hand,NULL; EF_hand_6,CUFF.44880.1
         (124 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54490.1 | Symbols: PBP1 | pinoid-binding protein 1 | chr5:22...   138   1e-33
AT4G27280.1 | Symbols:  | Calcium-binding EF-hand family protein...   135   8e-33
AT2G46600.1 | Symbols:  | Calcium-binding EF-hand family protein...   129   4e-31

>AT5G54490.1 | Symbols: PBP1 | pinoid-binding protein 1 |
           chr5:22121458-22121841 FORWARD LENGTH=127
          Length = 127

 Score =  138 bits (347), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/107 (62%), Positives = 83/107 (77%), Gaps = 1/107 (0%)

Query: 13  EFEDLLPVMANKLGGEGLIKELCNGFDMLMDKDRGVITLESLKTNAA-VLGLQDMKEDEL 71
           +F+D  P MA KLGGEGLI+E+C GF++LMDKD+GVIT ESL+ NA+ VLGL D+ +D++
Sbjct: 18  QFQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDV 77

Query: 72  VSMIREGDLDGDGALTQMEFCVLMFRLSPELMEESWIWLEEALQHEL 118
             MI EGD D DGAL QMEFCVLMFRLSPELME S   + E ++ E 
Sbjct: 78  RYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124


>AT4G27280.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr4:13663770-13664162 REVERSE LENGTH=130
          Length = 130

 Score =  135 bits (339), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 66/106 (62%), Positives = 82/106 (77%), Gaps = 1/106 (0%)

Query: 14  FEDLLPVMANKLGGEGLIKELCNGFDMLMDKDRGVITLESLKTNAA-VLGLQDMKEDELV 72
           F D LP MA  LGGEGLI ELCNGF++LMD+++GVIT ESL+ NAA VLGL D+ ++++ 
Sbjct: 19  FHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVR 78

Query: 73  SMIREGDLDGDGALTQMEFCVLMFRLSPELMEESWIWLEEALQHEL 118
            MI+EGD D DGAL QMEFCVLMFRLSP+LME S   + E ++ E 
Sbjct: 79  CMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124


>AT2G46600.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr2:19136070-19136477 FORWARD LENGTH=135
          Length = 135

 Score =  129 bits (324), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/118 (51%), Positives = 84/118 (71%)

Query: 4   TGTVNGKGLEFEDLLPVMANKLGGEGLIKELCNGFDMLMDKDRGVITLESLKTNAAVLGL 63
           T +      ++ED+LPVMA K+  E  + ELC GF +L D +R +IT ESL+ N+ +LG+
Sbjct: 12  TTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGI 71

Query: 64  QDMKEDELVSMIREGDLDGDGALTQMEFCVLMFRLSPELMEESWIWLEEALQHELDNN 121
           + M +++   M+REGDLDGDGAL Q EFCVLM RLSPE+ME++  WLE+AL  EL N+
Sbjct: 72  EGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCNH 129