Miyakogusa Predicted Gene

Lj3g3v2851180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2851180.1 Non Characterized Hit- tr|H9VE67|H9VE67_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,57.69,2e-17,RNI-like,NULL; no
description,NULL,NODE_35593_length_1006_cov_204.871765.path2.1
         (292 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g080020.1 | F-box protein MAX2 | HC | chr4:30974880-309776...   451   e-127

>Medtr4g080020.1 | F-box protein MAX2 | HC | chr4:30974880-30977678
           | 20130731
          Length = 711

 Score =  451 bits (1161), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/299 (78%), Positives = 259/299 (86%), Gaps = 11/299 (3%)

Query: 1   MEVLSKKCPNLRVLRLGQFQGICLAIGSKLDGIALCQGLRSLSIHGCADLDDMGLIEIAR 60
           +E+LS KCPNL+V++LGQFQGICLAIGS+LDGIALC GL+SLS++ C DLDDMGLIEI R
Sbjct: 312 LEMLSSKCPNLKVVKLGQFQGICLAIGSRLDGIALCHGLQSLSVNTCGDLDDMGLIEIGR 371

Query: 61  GCSRLVQFELQGCKLVTEKGLGTMACLLRKTLVDVKVSCCVNLDTAAALRALDPIRDRIE 120
           GCSRLV+FE+QGCKLVTEKGL TMACLLR+TL+DVKV+ CVNLD AA LRAL+PIRDRIE
Sbjct: 372 GCSRLVRFEIQGCKLVTEKGLRTMACLLRRTLIDVKVASCVNLDAAATLRALEPIRDRIE 431

Query: 121 RLHVDCVWNGLKDSDDNMGGGLLNFDLN--DPNGGAEIMDCFGDEEC-EDPSKRKRQRCE 177
           RLH+DC+W   K+S DN G GL NFDLN  D   G+E+MDCFG EEC ED S RKRQRCE
Sbjct: 432 RLHLDCIW---KES-DNFGQGLFNFDLNTLDELNGSELMDCFGGEECGEDTSMRKRQRCE 487

Query: 178 YGLEGDDSLVQS----NGNGYYGKNWDRLRYLSLWIKVGDLLNLLPVAGLEDCPNLEEIR 233
           YGLE DD  VQS    NGNGYYG +WDRL YLSLWIKVG+LL  LPVAGLEDCPNLEEIR
Sbjct: 488 YGLEADDLFVQSNGNGNGNGYYGYSWDRLEYLSLWIKVGELLTQLPVAGLEDCPNLEEIR 547

Query: 234 VKVEGDCRGQPKPAESEFGLSILACYPQLSKMQLDCGDTRGYVLTAPSGQMDLSLWERF 292
           +KVEGDCRGQPKPA  EFGLSILACYPQLSKMQLDCGDT+GYV TAPSGQ+DLS WERF
Sbjct: 548 IKVEGDCRGQPKPAVREFGLSILACYPQLSKMQLDCGDTKGYVYTAPSGQLDLSWWERF 606