Miyakogusa Predicted Gene

Lj3g3v2851180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2851180.1 Non Chatacterized Hit- tr|H9VE67|H9VE67_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,57.69,2e-17,RNI-like,NULL; no
description,NULL,NODE_35593_length_1006_cov_204.871765.path2.1
         (292 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42620.1 | Symbols: MAX2, ORE9, PPS | RNI-like superfamily pr...   316   9e-87

>AT2G42620.1 | Symbols: MAX2, ORE9, PPS | RNI-like superfamily
           protein | chr2:17756170-17758251 FORWARD LENGTH=693
          Length = 693

 Score =  316 bits (810), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 163/295 (55%), Positives = 209/295 (70%), Gaps = 19/295 (6%)

Query: 1   MEVLSKKCPNLRVLRLGQFQGICLAIG-SKLDGIALCQGLRSLSIHGCADLDDMGLIEIA 59
           +E L+ KC  LRVL+LGQFQG+C A    +LDG+ALC GL+SLSI    DL DMGL+ I 
Sbjct: 310 LEALNSKCKKLRVLKLGQFQGVCSATEWRRLDGVALCGGLQSLSIKNSGDLTDMGLVAIG 369

Query: 60  RGCSRLVQFELQGCKLVTEKGLGTMACLLRKTLVDVKVSCCVNLDTAAALRALDPIRDRI 119
           RGC +L  FE+QGC+ VT  GL TM  L  KTL DV++SCC NLDTAA+L+A++PI DRI
Sbjct: 370 RGCCKLTTFEIQGCENVTVDGLRTMVSLRSKTLTDVRISCCKNLDTAASLKAIEPICDRI 429

Query: 120 ERLHVDCVWNGLKDSDDNMGGGLLNFDLNDPNGGAEIMDCFGDEECEDPSKRKRQRCEYG 179
           +RLH+DCVW+G +D               +  G  E  +   +EE +D  +R ++RC+Y 
Sbjct: 430 KRLHIDCVWSGSED--------------EEVEGRVETSEADHEEE-DDGYERSQKRCKYS 474

Query: 180 LEGDDSLVQSNGNGYYGKN--WDRLRYLSLWIKVGDLLNLLPVAGLEDCPNLEEIRVKVE 237
            E ++    S+ NG+  ++  W++L YLSLWI VG+ L  LP+ GL+DCPNLEEIR+K+E
Sbjct: 475 FE-EEHCSTSDVNGFCSEDRVWEKLEYLSLWINVGEFLTPLPMTGLDDCPNLEEIRIKIE 533

Query: 238 GDCRGQPKPAESEFGLSILACYPQLSKMQLDCGDTRGYVLTAPSGQMDLSLWERF 292
           GDCRG+ +PAE EFGLS LA YP+LSKMQLDCGDT G+ LTAP  QMDLSLWERF
Sbjct: 534 GDCRGKRRPAEPEFGLSCLALYPKLSKMQLDCGDTIGFALTAPPMQMDLSLWERF 588