Miyakogusa Predicted Gene
- Lj3g3v2722590.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2722590.1 tr|G7L1D4|G7L1D4_MEDTR Neurobeachin-like protein
OS=Medicago truncatula GN=MTR_7g075660 PE=4 SV=1,76.45,0,SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; Concanavalin A-like
lectins/glucanases,Concanavalin ,CUFF.44496.1
(738 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45540.2 | Symbols: | WD-40 repeat family protein / beige-re... 877 0.0
AT2G45540.1 | Symbols: | WD-40 repeat family protein / beige-re... 877 0.0
AT3G60920.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Beige/BEAC... 474 e-134
AT1G58230.1 | Symbols: | binding | chr1:21566331-21578865 FORWA... 70 5e-12
>AT2G45540.2 | Symbols: | WD-40 repeat family protein /
beige-related | chr2:18757881-18772229 REVERSE
LENGTH=3001
Length = 3001
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/718 (60%), Positives = 512/718 (71%), Gaps = 42/718 (5%)
Query: 59 HGVDSVTTGMVGNQFEHVSLKGQET---------------NNEYVGSNPSEGLDNLQHAL 103
G+ S + FE VSL QE +N G + G + + + L
Sbjct: 30 QGISSADRAFKDDDFEQVSLGDQEKAANESQGDLQEPGSFSNSDHGRSSFGGTEVVTYQL 89
Query: 104 SENEEHFQC-------SSGMYSPECDSSPVAVMQH---------------GHSPVSSPQK 141
S +E + S + SP + MQ G+SPV SPQK
Sbjct: 90 SGTQEMYDLMPMDDVQSDRLSSPGPEREAAYSMQQSLSETSLDSVHHPESGYSPVHSPQK 149
Query: 142 PRQKSSMLNVSAELLHLVDSAIMGKPEGMEKLKNIASGVANFGSGEEMESASFLIVDSLL 201
P+ K+++ NVS ELLHLVDSAIMGKPE ++KLKN+ G+ NFG GEE E+ +FL+VDSL+
Sbjct: 150 PKPKATVPNVSPELLHLVDSAIMGKPESLDKLKNVVCGIENFGCGEESEATAFLVVDSLI 209
Query: 202 ATMGGVESFDEDGDNNPPSVMLNSRAAIVAGELIPWLPYTGDSDVVMSPRTRMVRGLLAI 261
ATMGGVESF+ED D+NPPSVMLNSRAAIV+GELIPWLP GD+ MSPRTRMVRGLL I
Sbjct: 210 ATMGGVESFEEDEDSNPPSVMLNSRAAIVSGELIPWLPGLGDNVNFMSPRTRMVRGLLVI 269
Query: 262 LRACTRNRAMCSMAGLLGVLLRTAEKIFTVDVGLNGQIRWDGTP-LCRCIQHLAGHSLSV 320
LR+CTRNRAMCS AGLLGVLLR+ E I + DV + +W+ L CIQHLAGHSLSV
Sbjct: 270 LRSCTRNRAMCSTAGLLGVLLRSVEAIISKDVDM----KWNAAAILLLCIQHLAGHSLSV 325
Query: 321 SDLHRWFQVITKTLTTIWAPRLLVAMEKAMSEKESMGPACTFEFDXXXXXXXXXXXXRWP 380
DLHRW QVI +TT W+ L++A+EKAMS KES GPACTFEFD RWP
Sbjct: 326 DDLHRWLQVIKAAITTAWSSPLMLALEKAMSGKESRGPACTFEFDGESSGLLGPGESRWP 385
Query: 381 FINGYAFATWIYIESFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGTAHM 440
F NGYAFATWIYIESF GEGTAHM
Sbjct: 386 FTNGYAFATWIYIESFADTLNAATAAAAIAAAAAAKSGKTSAMSAAAAASALAGEGTAHM 445
Query: 441 PRLFSFLSADNLGIEAYFHAQFLVVEIGTGKGKRSALHFTYPFKPQCWYFIGLEHIGQHG 500
PRLFSFLSADN GIEAYFHAQFLVVE G+GKG++S+LHFT+ FKPQCWYFIGLEH + G
Sbjct: 446 PRLFSFLSADNQGIEAYFHAQFLVVESGSGKGRKSSLHFTHAFKPQCWYFIGLEHSCKQG 505
Query: 501 IIGKAESEVRLYVDGSLYESHPFEFPKISKPIAFCCIGTNPPPTMAGLQRRRRQCPLFAE 560
++GKAESE+RLY+DGSLYES PF+FP+ISKP++FCCIGTNPPPTMAGLQRRRRQCPLFAE
Sbjct: 506 LLGKAESELRLYIDGSLYESRPFDFPRISKPLSFCCIGTNPPPTMAGLQRRRRQCPLFAE 565
Query: 561 MGPVYIFKEPIGLERMTRLASRGGDIVPSFGNAAGLPWLATNADVQRKAEESVLLDAEIG 620
MGPVYIFKEPIG ERM RLASRGGD++P FGN AGLPWLATN V+ KAEES +LDA+IG
Sbjct: 566 MGPVYIFKEPIGPERMARLASRGGDVLPCFGNGAGLPWLATNDYVRNKAEESSILDADIG 625
Query: 621 GFIHLLYHPSLLSGRFCPDASPTGAAGILRRPAEVLGQVHVATRMRPVDALWALAYGSPL 680
G+ HLLYHP LLSGRFCPDAS +GAAG LRRPAEVLGQVHVATRM+PV++ WALAYG P+
Sbjct: 626 GYTHLLYHPCLLSGRFCPDASLSGAAGTLRRPAEVLGQVHVATRMKPVESFWALAYGGPM 685
Query: 681 SMLPLAISNVHEKTLEPQQGNFSVSVATTSLASPIFRIISTAIQHPKNNEEFARGKGP 738
S+LPL +S+VH+ +LEP GN +S++T +LA+P+FRI+S AIQHP NNEE R +GP
Sbjct: 686 SLLPLTVSSVHKDSLEPCLGNLPLSLSTVTLAAPVFRIMSVAIQHPGNNEELCRTQGP 743
>AT2G45540.1 | Symbols: | WD-40 repeat family protein /
beige-related | chr2:18757881-18772229 REVERSE
LENGTH=2946
Length = 2946
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/718 (60%), Positives = 512/718 (71%), Gaps = 42/718 (5%)
Query: 59 HGVDSVTTGMVGNQFEHVSLKGQET---------------NNEYVGSNPSEGLDNLQHAL 103
G+ S + FE VSL QE +N G + G + + + L
Sbjct: 30 QGISSADRAFKDDDFEQVSLGDQEKAANESQGDLQEPGSFSNSDHGRSSFGGTEVVTYQL 89
Query: 104 SENEEHFQC-------SSGMYSPECDSSPVAVMQH---------------GHSPVSSPQK 141
S +E + S + SP + MQ G+SPV SPQK
Sbjct: 90 SGTQEMYDLMPMDDVQSDRLSSPGPEREAAYSMQQSLSETSLDSVHHPESGYSPVHSPQK 149
Query: 142 PRQKSSMLNVSAELLHLVDSAIMGKPEGMEKLKNIASGVANFGSGEEMESASFLIVDSLL 201
P+ K+++ NVS ELLHLVDSAIMGKPE ++KLKN+ G+ NFG GEE E+ +FL+VDSL+
Sbjct: 150 PKPKATVPNVSPELLHLVDSAIMGKPESLDKLKNVVCGIENFGCGEESEATAFLVVDSLI 209
Query: 202 ATMGGVESFDEDGDNNPPSVMLNSRAAIVAGELIPWLPYTGDSDVVMSPRTRMVRGLLAI 261
ATMGGVESF+ED D+NPPSVMLNSRAAIV+GELIPWLP GD+ MSPRTRMVRGLL I
Sbjct: 210 ATMGGVESFEEDEDSNPPSVMLNSRAAIVSGELIPWLPGLGDNVNFMSPRTRMVRGLLVI 269
Query: 262 LRACTRNRAMCSMAGLLGVLLRTAEKIFTVDVGLNGQIRWDGTP-LCRCIQHLAGHSLSV 320
LR+CTRNRAMCS AGLLGVLLR+ E I + DV + +W+ L CIQHLAGHSLSV
Sbjct: 270 LRSCTRNRAMCSTAGLLGVLLRSVEAIISKDVDM----KWNAAAILLLCIQHLAGHSLSV 325
Query: 321 SDLHRWFQVITKTLTTIWAPRLLVAMEKAMSEKESMGPACTFEFDXXXXXXXXXXXXRWP 380
DLHRW QVI +TT W+ L++A+EKAMS KES GPACTFEFD RWP
Sbjct: 326 DDLHRWLQVIKAAITTAWSSPLMLALEKAMSGKESRGPACTFEFDGESSGLLGPGESRWP 385
Query: 381 FINGYAFATWIYIESFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGTAHM 440
F NGYAFATWIYIESF GEGTAHM
Sbjct: 386 FTNGYAFATWIYIESFADTLNAATAAAAIAAAAAAKSGKTSAMSAAAAASALAGEGTAHM 445
Query: 441 PRLFSFLSADNLGIEAYFHAQFLVVEIGTGKGKRSALHFTYPFKPQCWYFIGLEHIGQHG 500
PRLFSFLSADN GIEAYFHAQFLVVE G+GKG++S+LHFT+ FKPQCWYFIGLEH + G
Sbjct: 446 PRLFSFLSADNQGIEAYFHAQFLVVESGSGKGRKSSLHFTHAFKPQCWYFIGLEHSCKQG 505
Query: 501 IIGKAESEVRLYVDGSLYESHPFEFPKISKPIAFCCIGTNPPPTMAGLQRRRRQCPLFAE 560
++GKAESE+RLY+DGSLYES PF+FP+ISKP++FCCIGTNPPPTMAGLQRRRRQCPLFAE
Sbjct: 506 LLGKAESELRLYIDGSLYESRPFDFPRISKPLSFCCIGTNPPPTMAGLQRRRRQCPLFAE 565
Query: 561 MGPVYIFKEPIGLERMTRLASRGGDIVPSFGNAAGLPWLATNADVQRKAEESVLLDAEIG 620
MGPVYIFKEPIG ERM RLASRGGD++P FGN AGLPWLATN V+ KAEES +LDA+IG
Sbjct: 566 MGPVYIFKEPIGPERMARLASRGGDVLPCFGNGAGLPWLATNDYVRNKAEESSILDADIG 625
Query: 621 GFIHLLYHPSLLSGRFCPDASPTGAAGILRRPAEVLGQVHVATRMRPVDALWALAYGSPL 680
G+ HLLYHP LLSGRFCPDAS +GAAG LRRPAEVLGQVHVATRM+PV++ WALAYG P+
Sbjct: 626 GYTHLLYHPCLLSGRFCPDASLSGAAGTLRRPAEVLGQVHVATRMKPVESFWALAYGGPM 685
Query: 681 SMLPLAISNVHEKTLEPQQGNFSVSVATTSLASPIFRIISTAIQHPKNNEEFARGKGP 738
S+LPL +S+VH+ +LEP GN +S++T +LA+P+FRI+S AIQHP NNEE R +GP
Sbjct: 686 SLLPLTVSSVHKDSLEPCLGNLPLSLSTVTLAAPVFRIMSVAIQHPGNNEELCRTQGP 743
>AT3G60920.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Beige/BEACH
(InterPro:IPR000409); BEST Arabidopsis thaliana protein
match is: WD-40 repeat family protein / beige-related
(TAIR:AT2G45540.1); Has 1795 Blast hits to 1563 proteins
in 214 species: Archae - 2; Bacteria - 29; Metazoa -
830; Fungi - 160; Plants - 230; Viruses - 0; Other
Eukaryotes - 544 (source: NCBI BLink). |
chr3:22503328-22513031 REVERSE LENGTH=1941
Length = 1941
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/392 (58%), Positives = 273/392 (69%), Gaps = 15/392 (3%)
Query: 350 MSEKESMGPACTFEFDXXXXXXXXXXXXRWPFINGYAFATWIYIESFXXXXXXXXXXXXX 409
M+ KES GPAC+FEF RWPF NGYAFATWIYIESF
Sbjct: 1 MNGKESRGPACSFEFVGESSGLLGPGESRWPFTNGYAFATWIYIESFADTLDASTAAAAI 60
Query: 410 XXXXXXXXXXXXXXXXXXXXXXXXGEGTAHMPRLFSFLSADNLGIEAYFHAQFLVVEIGT 469
GEGTAHMPRLFSFL+ DN GIEAYF+AQFLVVE G+
Sbjct: 61 AAASAAKSGKISNAAPANVHT---GEGTAHMPRLFSFLTPDNQGIEAYFYAQFLVVESGS 117
Query: 470 GKGKRSALHFTYPFKPQCWYFIGLEHIGQHGIIGKAESEVRLYVDGSLYESHPFEFPKIS 529
GKG +++LHFT+ FKPQCWYFIGLEH G++G ++SE+RLY+DGSLYE+ PF++P+IS
Sbjct: 118 GKGSKTSLHFTHAFKPQCWYFIGLEHTCNQGLLGNSDSELRLYIDGSLYETRPFDYPRIS 177
Query: 530 KPIAFCCIGTNPPPTMAGLQRRRRQCPLFAEMGPVYIFKEPIGLERMTRLASRGGDIVPS 589
KP++FCCIG+NPP T AGLQRRRRQC LFAEMGPVYIFKEPIG ERMTRLA+RGGD++P
Sbjct: 178 KPLSFCCIGSNPPSTTAGLQRRRRQCALFAEMGPVYIFKEPIGPERMTRLATRGGDVLPC 237
Query: 590 FGNAAGLPWLATNADVQRKAEESVLLDAEIGGFIHLLYHPSLLSGRFCPDASPTGAAGIL 649
FGN AGLPWLATN V+ AEES L DAE+GG+IHLLYHP LLSGRFCPDAS +GAAG
Sbjct: 238 FGNGAGLPWLATNDHVRNVAEESSLSDAELGGYIHLLYHPCLLSGRFCPDASLSGAAGDE 297
Query: 650 RRPAEVLGQVHVATRMRPVDALWALA---YGSPLSMLPLAISNVHEKTLEPQQGNFSVSV 706
+ P V AL L +G P+S+LPL +S+VH+ LEP N S+
Sbjct: 298 KTPYSFSAVVF---------ALCYLVFPYFGRPMSLLPLTVSSVHKDNLEPCSRNVPSSL 348
Query: 707 ATTSLASPIFRIISTAIQHPKNNEEFARGKGP 738
T SLA+PIFR+IS AI+HP NNEE +R +GP
Sbjct: 349 TTYSLAAPIFRMISFAIKHPGNNEELSRTRGP 380
>AT1G58230.1 | Symbols: | binding | chr1:21566331-21578865 FORWARD
LENGTH=2604
Length = 2604
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 133/348 (38%), Gaps = 84/348 (24%)
Query: 261 ILRACTRNRAMCSMAGLLGVLLRTAEKIFTVDVGLNGQIRWDGTPLCRCIQHLAGHSLSV 320
+LR NRA C AG+L +LL F+++ + ++ + + Q + GHS+S
Sbjct: 358 LLRDSISNRASCVRAGMLHLLL----DWFSLENDDSVILK-----ITQLTQTIGGHSISG 408
Query: 321 SDLHRWFQVITKTLTTIWAPRLLVAMEKAMSEKESMGPACTFEFDXXXXXXXXXXXXRWP 380
D+ + F ++ + + +S GP F+ + +WP
Sbjct: 409 KDIRKIFALLRSERVGNQQRYRSLLLACLLSMLNEKGPTGFFDMNGVESGIVIRTPVQWP 468
Query: 381 FINGYAFATWIYIESFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGTAHM 440
G++F W+ +ESF G+G
Sbjct: 469 ANKGFSFCCWLRVESFP------------------------------------GDGKMG- 491
Query: 441 PRLFSFLSADNLGIEAYFHAQFLVVEIGTGKGKRSALHFTYPFKPQC-----------WY 489
+FSF+S + G A GK + + K QC W+
Sbjct: 492 --IFSFMSKNGKGCFAAL-------------GKDGLSYVSLNLKRQCVNVHTNLVCKKWH 536
Query: 490 FIGLEHIGQHGIIGKA---ESEVRLYVDGSLYESHPFEFPKISKPIAFCCIGTNPP-PTM 545
FI + H IG+A S +R YV+G L S +PK++ + C IGT P +
Sbjct: 537 FICVSHS-----IGRAFWGGSLLRCYVNGDLVSSERCSYPKVTDVLTSCLIGTRITLPHI 591
Query: 546 A---GLQRRRRQCPLFAEMGPVYIFKEPIGLERMTRLASRGGDIVPSF 590
GL+ R P F ++GPVY+F + + E++ + S G + +F
Sbjct: 592 QDNDGLESIRDVFPFFGQIGPVYLFNDSLSSEQVQAIYSLGPSYMYAF 639