Miyakogusa Predicted Gene
- Lj3g3v2579350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v2579350.1 Non Chatacterized Hit- tr|H2XR40|H2XR40_CIOIN
Uncharacterized protein (Fragment) OS=Ciona
intestinal,32.54,0.00000002,RING/U-box,NULL; ZF_RING_2,Zinc finger,
RING-type; no description,Zinc finger, RING/FYVE/PHD-type;
s,NODE_23673_length_1883_cov_44.977695.path2.1
(127 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g13060.1 182 6e-47
Glyma18g27930.1 181 2e-46
Glyma16g01030.1 175 9e-45
Glyma10g02920.1 52 1e-07
Glyma02g16860.1 52 2e-07
Glyma04g04650.1 51 2e-07
Glyma06g04710.1 50 7e-07
Glyma05g23770.1 50 7e-07
Glyma17g16560.1 49 9e-07
Glyma15g16660.1 49 1e-06
Glyma15g11100.1 48 3e-06
Glyma18g43100.1 48 3e-06
Glyma07g18240.1 47 3e-06
>Glyma03g13060.1
Length = 388
Score = 182 bits (463), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/127 (73%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Query: 1 MIVDLSFKTKILFWSGIVLGSMSVGVLSYAVVXXXXXXXXXXXXXXXXXXXXTVSVNVDP 60
MIVDLS KTKILFW GI LGSMSVGVL YAVV VS +V+P
Sbjct: 263 MIVDLSSKTKILFWGGIALGSMSVGVLGYAVVRNWNKWKQWKQQRQLQQQRQAVS-DVEP 321
Query: 61 HLDDETEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRD 120
+DDE EDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVE EV+PKCPVCRQEIRD
Sbjct: 322 QMDDEIEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEREVAPKCPVCRQEIRD 381
Query: 121 SVRIFES 127
SVRI+ES
Sbjct: 382 SVRIYES 388
>Glyma18g27930.1
Length = 387
Score = 181 bits (459), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/127 (71%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
Query: 1 MIVDLSFKTKILFWSGIVLGSMSVGVLSYAVVXXXXXXXXXXXXXXXXXXXXTVSVNVDP 60
MI+DLS KTKILFW GI LGSMSVGVL YAVV VS +V+P
Sbjct: 262 MIMDLSIKTKILFWGGIALGSMSVGVLGYAVVRNWNKWKQWKQQRQLQQQRQAVS-DVEP 320
Query: 61 HLDDETEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRD 120
+DDE ED PDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVE EV+PKCPVCRQEIRD
Sbjct: 321 QMDDEIEDAPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEREVAPKCPVCRQEIRD 380
Query: 121 SVRIFES 127
SVRI+ES
Sbjct: 381 SVRIYES 387
>Glyma16g01030.1
Length = 383
Score = 175 bits (444), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/127 (70%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
Query: 1 MIVDLSFKTKILFWSGIVLGSMSVGVLSYAVVXXXXXXXXXXXXXXXXXXXXTVSVNVDP 60
MIVDLS K KILFW GI LGSMSVGVL YAV+ VS + +P
Sbjct: 258 MIVDLSIKAKILFWGGISLGSMSVGVLGYAVLRNWIKWKRWKVQRQLQQQRQAVS-DAEP 316
Query: 61 HLDDETEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRD 120
+DDE EDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVE EV+PKCPVCRQEIRD
Sbjct: 317 QVDDEIEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEREVAPKCPVCRQEIRD 376
Query: 121 SVRIFES 127
SVR +ES
Sbjct: 377 SVRTYES 383
>Glyma10g02920.1
Length = 339
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
Query: 69 VPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRDSVRIF 125
+PD LCVICL + +VF+PCGH+ CC C+ + CP+CR++I V+ F
Sbjct: 288 MPD--LCVICLEQEYNAVFVPCGHMCCCTACSSHL-----TNCPLCRRQIEKVVKTF 337
>Glyma02g16860.1
Length = 339
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
Query: 69 VPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRDSVRIF 125
+PD LCVICL + +VF+PCGH+ CC C+ + CP+CR++I V+ F
Sbjct: 288 MPD--LCVICLEQEYNAVFVPCGHMCCCTTCSSHL-----TNCPLCRRQIEKVVKTF 337
>Glyma04g04650.1
Length = 196
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 71 DGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRDSVRIFES 127
D +LC IC +R S F+PCGH C CA + E S CP+CR+ I R++ +
Sbjct: 140 DEKLCCICYDEQRSSFFVPCGHCATCYDCAQRILDEESIVCPICRRLIHKVRRLYHN 196
>Glyma06g04710.1
Length = 206
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 71 DGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRDSVRIFES 127
D +LC IC +R S F+PCGH C CA + S CP+CR+ I R++ +
Sbjct: 150 DEKLCCICYDEQRNSFFVPCGHCATCYDCAERIVDGESKVCPICRRLIHKVRRLYHN 206
>Glyma05g23770.1
Length = 600
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 61 HLDDETE-DVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIR 119
+L+D +E +V + C++C+ VF+PC H V C C+ + CP CR +I+
Sbjct: 531 NLEDLSEKEVNSNRECIVCMKDEVSIVFLPCAHQVMCASCSDEYGRKGKAICPCCRVQIQ 590
Query: 120 DSVRIF 125
+R+F
Sbjct: 591 QRIRVF 596
>Glyma17g16560.1
Length = 721
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 61 HLDDETE-DVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIR 119
+L+D +E ++ + C++C+ VF+PC H V C C+ + CP CR +I+
Sbjct: 652 NLEDFSEKEINSNRECIVCMKDEVSIVFLPCAHQVMCASCSDEYGRKGKATCPCCRVQIQ 711
Query: 120 DSVRIF 125
+R+F
Sbjct: 712 QRIRVF 717
>Glyma15g16660.1
Length = 735
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 75 CVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRDSVRIF 125
C IC + SV CGH+ C CA ++ S KCP+CR +I D VR++
Sbjct: 683 CCICYEMKVDSVLYRCGHMCTCLKCANELQWN-SGKCPICRAKIEDVVRVY 732
>Glyma15g11100.1
Length = 373
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 64 DETEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRDSVR 123
D+ +D G+ CVIC+ + + +PC H+ C CA ++ + S KCP+CRQ I + +
Sbjct: 307 DDFDDNDPGKECVICMTEPKDTAVLPCRHMCMCSECANALR-QQSNKCPICRQPIEELIE 365
Query: 124 I 124
I
Sbjct: 366 I 366
>Glyma18g43100.1
Length = 360
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 73 QLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRDSVRIF 125
+LC IC R F+PCGH V C C + E + CPVCR+ ++ +IF
Sbjct: 307 RLCAICFDAPRDCFFLPCGHCVACFACGTRI-AEAAGTCPVCRRNMKKVRKIF 358
>Glyma07g18240.1
Length = 455
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 62 LDDETEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQGCAISVEGEVSPKCPVCRQEIRDS 121
+D ET + LC IC R F+PCGH V C C + E + CPVCR+ ++
Sbjct: 392 VDGETSNNTR-HLCAICFDAPRDCFFLPCGHCVACFACGTRI-AEAAGTCPVCRRNMKKV 449
Query: 122 VRIF 125
+IF
Sbjct: 450 RKIF 453