Miyakogusa Predicted Gene
- Lj3g3v2576540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2576540.1 Non Chatacterized Hit- tr|A2Z1N7|A2Z1N7_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,43.55,3e-16,Lung_7-TM_R,Transmembrane receptor, eukaryota;
PTM1,NULL; LUNG SEVEN TRANSMEMBRANE RECEPTOR,Transmem,CUFF.44259.1
(1530 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61112 similar to UniRef100_A7P6G1 Cluster: Chromosome... 1608 0.0
gnl|LJGI|TC63274 homologue to UniRef100_A7P6G1 Cluster: Chromoso... 946 0.0
gnl|LJGI|TC58721 similar to UniRef100_Q2HTD6 Cluster: RNA-bindin... 168 6e-41
>gnl|LJGI|TC61112 similar to UniRef100_A7P6G1 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 944
Score = 1608 bits (811), Expect = 0.0
Identities = 811/811 (100%)
Strand = Plus / Plus
Query: 1 atgtctcgtttctcaattctcacgtttctcctgctactctttctgagcacagaagcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atgtctcgtttctcaattctcacgtttctcctgctactctttctgagcacagaagcttcc 193
Query: 61 gttcacgactacagaggcgaacatttcgccgccaagggcaacgcgtttgtcatacatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gttcacgactacagaggcgaacatttcgccgccaagggcaacgcgtttgtcatacatgga 253
Query: 121 ggcagcgaaggaatctactcaactactcccaattccaacgaaacttcaccttctgcttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggcagcgaaggaatctactcaactactcccaattccaacgaaacttcaccttctgcttca 313
Query: 181 aatggcgactcttacattcggtttgatagagtcacattccgtagaacgaaggaattctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aatggcgactcttacattcggtttgatagagtcacattccgtagaacgaaggaattctca 373
Query: 241 aactttagctcgtggcctattcaagctgttgtttttgaggttgaagatagagagacaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aactttagctcgtggcctattcaagctgttgtttttgaggttgaagatagagagacaatt 433
Query: 301 ggtggttcagcgtatgggggtcaaagggctgtctgttgcaccggtgatctagcaaaactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggtggttcagcgtatgggggtcaaagggctgtctgttgcaccggtgatctagcaaaactc 493
Query: 361 ggtgtgtgtgctgaggggcaggtaatttaccgcccttctcaggtgaattctgattggcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggtgtgtgtgctgaggggcaggtaatttaccgcccttctcaggtgaattctgattggcct 553
Query: 421 aaagtttttggtgtcccttttgaaacggatgatgaagtagcagtgctgccgacgaaatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aaagtttttggtgtcccttttgaaacggatgatgaagtagcagtgctgccgacgaaatca 613
Query: 481 atacaaatcacgaaaactgggatgtataatttgtatttcatccattgtgacacaaggctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 atacaaatcacgaaaactgggatgtataatttgtatttcatccattgtgacacaaggctt 673
Query: 541 aaagatttggctgtagaagggaaaactgtatggaaaaatccctctggctatcttcctggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aaagatttggctgtagaagggaaaactgtatggaaaaatccctctggctatcttcctggt 733
Query: 601 agaatggcacctatgaaaattttctaccagttcatgtcttttgcatttgtgttgcttggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 agaatggcacctatgaaaattttctaccagttcatgtcttttgcatttgtgttgcttggg 793
Query: 661 ctcttttggttctatcaatatgttagattttggaaggaagtatttccactgcagaactgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ctcttttggttctatcaatatgttagattttggaaggaagtatttccactgcagaactgc 853
Query: 721 attaccctagtgataacccttggcatgtttgagatgactctgtggtactttgactatgct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 attaccctagtgataacccttggcatgtttgagatgactctgtggtactttgactatgct 913
Query: 781 gaattcagtgagactggaatcaggccaactg 811
|||||||||||||||||||||||||||||||
Sbjct: 914 gaattcagtgagactggaatcaggccaactg 944
>gnl|LJGI|TC63274 homologue to UniRef100_A7P6G1 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (20%)
Length = 856
Score = 946 bits (477), Expect = 0.0
Identities = 477/477 (100%)
Strand = Plus / Plus
Query: 1054 gtattggatgtgttcttcattctttggattttcacctcactctctgcaactttaactaag 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtattggatgtgttcttcattctttggattttcacctcactctctgcaactttaactaag 61
Query: 1114 cttcaggcaagaaggatgatgataaaattggacatgtataggaagttcactaatgctttg 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cttcaggcaagaaggatgatgataaaattggacatgtataggaagttcactaatgctttg 121
Query: 1174 gcagttgctgtgatcgtatctgtcggctggatatgttatgagcttcatttcaaatcaaat 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcagttgctgtgatcgtatctgtcggctggatatgttatgagcttcatttcaaatcaaat 181
Query: 1234 gatgtatacaatgagagatggcagaatgcatggatcatcccagccttttggcaagttctg 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gatgtatacaatgagagatggcagaatgcatggatcatcccagccttttggcaagttctg 241
Query: 1294 tcttactctctcctgtgtgttatctgtgctctttgggcaccatctcaaaattcaacaaga 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcttactctctcctgtgtgttatctgtgctctttgggcaccatctcaaaattcaacaaga 301
Query: 1354 tatgcgtaccgtggtgatgatggaagcgatgaatttgatagggatgaaactactttgacg 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tatgcgtaccgtggtgatgatggaagcgatgaatttgatagggatgaaactactttgacg 361
Query: 1414 ctcattaaaccggcatctatttctgcaaaggatgttcgaattgtgccagatgctagacca 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctcattaaaccggcatctatttctgcaaaggatgttcgaattgtgccagatgctagacca 421
Query: 1474 gtgcaaggtggcaatggagtttcaaatgatgatttagaagaagacaagagagaataa 1530
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtgcaaggtggcaatggagtttcaaatgatgatttagaagaagacaagagagaataa 478
>gnl|LJGI|TC58721 similar to UniRef100_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA
recognition motif); Calcium-binding EF- hand; n=1;
Medicago truncatula|Rep: RNA-binding region RNP-1 (RNA
recognition motif); Calcium-binding EF- hand - Medicago
truncatula (Barrel medic), partial (13%)
Length = 797
Score = 168 bits (85), Expect = 6e-41
Identities = 145/165 (87%)
Strand = Plus / Plus
Query: 17 ttctcacgtttctcctgctactctttctgagcacagaagcttccgttcacgactacagag 76
||||| ||||||| ||||||||||||||| | | ||||||||||||| || |||||||
Sbjct: 404 ttctcgcgtttctactgctactctttctgcgggccaaagcttccgttcatgattacagag 463
Query: 77 gcgaacatttcgccgccaagggcaacgcgtttgtcatacatggaggcagcgaaggaatct 136
| ||||||||| | |||||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 464 gggaacatttcacggccaagggcaacgcctttgtcatacatggaggcagcgatggaattt 523
Query: 137 actcaactactcccaattccaacgaaacttcaccttctgcttcaa 181
|||||||| ||||||||| |||||||||||| ||||| ||||||
Sbjct: 524 actcaactgctcccaatttcaacgaaacttccgcttctccttcaa 568