Miyakogusa Predicted Gene

Lj3g3v2438640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2438640.1 tr|B9IDX7|B9IDX7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_824545 PE=4
SV=1,41.91,0.000000000007,SUBFAMILY NOT NAMED,NULL;
TOPOISOMERASE-RELATED PROTEIN,NULL; seg,NULL,CUFF.44001.1
         (443 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g06250.2                                                       609   e-174
Glyma07g06250.1                                                       605   e-173
Glyma16g02900.1                                                       600   e-171

>Glyma07g06250.2 
          Length = 1317

 Score =  609 bits (1571), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 316/450 (70%), Positives = 346/450 (76%), Gaps = 9/450 (2%)

Query: 1    MASDMSERGTGPSPGTSMHVPRHQTSGFEATQTSGPDSPLTIAPVLLGPGSRHRAIGNSG 60
            MAS++ ER   P+ GTSMHVPR+Q SGFE  QTSG DSPL IAPVLLGPGSR R   NSG
Sbjct: 870  MASNIPERSNWPTSGTSMHVPRNQISGFETAQTSGSDSPLPIAPVLLGPGSRQRE--NSG 927

Query: 61   VVPYAFYPTGPPVPFVTMVPFYNFSTESSDTSTNNFSVEEGADNSGSGPNFDSSEGYNRS 120
            VVP+ FYPTGPPVPFVTM+P YNF TESSDTST+NF++EEGADNS S  NFDSSEGY   
Sbjct: 928  VVPFTFYPTGPPVPFVTMLPLYNFPTESSDTSTSNFNLEEGADNSDSSQNFDSSEGYEHP 987

Query: 121  ESV---NSMTRAAIESSEHKADILNSDFVSHWQNLQFGRFCQTSRHXXXXXXXXXXXXXX 177
            E     NSMTR AIESSEH+ DILNSDFVSHWQNLQ+GRFCQ SRH              
Sbjct: 988  EVSSPSNSMTRVAIESSEHRPDILNSDFVSHWQNLQYGRFCQNSRHPPSMTYPSPVMVPP 1047

Query: 178  AYLQGRYPLDGPGRP---DMNLFAQLMSYGPRVVPAAPLQSVSTRPTNMYQRFADDMPRY 234
             YLQGRYP DGPGRP   +MN+F+QLMSYGPR+VP APLQSVS RP ++YQR+ DDMPRY
Sbjct: 1048 VYLQGRYPWDGPGRPISGNMNIFSQLMSYGPRLVPVAPLQSVSNRPASIYQRYVDDMPRY 1107

Query: 235  RSGTGTYLPNPKASARDRHPTXXXXXXXXXXXXXHHSDREGNWNMNPKLRATGRGHNRNQ 294
            RSGTGTYLPNPK SARDRH T             HH DREGNWN N KLR TGRGHNRNQ
Sbjct: 1108 RSGTGTYLPNPKVSARDRHSTNTRRGNYPYDRSDHHGDREGNWNTNSKLRGTGRGHNRNQ 1167

Query: 295  AEKLNSKPERL-TSESRGERPWNAHRHDSFISHQNGPVRAGSSQNNPANAAYGMYSIPGM 353
             EK NSK ERL TSESR ERPW +HRHD+FI HQNGPVR+ SSQ+NP+N AYGMY +P M
Sbjct: 1168 TEKPNSKMERLATSESRAERPWGSHRHDTFIPHQNGPVRSNSSQSNPSNVAYGMYPMPAM 1227

Query: 354  NPGGVSSSGQPMPSVVMLYPYDHSGGYSPSAEQLEFGSLGPMGFPGVNELAHPNEGSHSG 413
            NP GVSS+G  MPSVVM YPYDH+ GY   AEQLEFG+LG MGF GVNEL+  NEGS S 
Sbjct: 1228 NPSGVSSNGPTMPSVVMFYPYDHNTGYGSPAEQLEFGTLGSMGFSGVNELSQANEGSQSS 1287

Query: 414  EALEDQRFHGASAQRASPDQPSSPHISRGP 443
             A EDQRF G   QR+SPDQPSSPH+SRGP
Sbjct: 1288 GAHEDQRFRGGHGQRSSPDQPSSPHVSRGP 1317


>Glyma07g06250.1 
          Length = 1322

 Score =  605 bits (1561), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 314/448 (70%), Positives = 344/448 (76%), Gaps = 9/448 (2%)

Query: 1    MASDMSERGTGPSPGTSMHVPRHQTSGFEATQTSGPDSPLTIAPVLLGPGSRHRAIGNSG 60
            MAS++ ER   P+ GTSMHVPR+Q SGFE  QTSG DSPL IAPVLLGPGSR R   NSG
Sbjct: 870  MASNIPERSNWPTSGTSMHVPRNQISGFETAQTSGSDSPLPIAPVLLGPGSRQRE--NSG 927

Query: 61   VVPYAFYPTGPPVPFVTMVPFYNFSTESSDTSTNNFSVEEGADNSGSGPNFDSSEGYNRS 120
            VVP+ FYPTGPPVPFVTM+P YNF TESSDTST+NF++EEGADNS S  NFDSSEGY   
Sbjct: 928  VVPFTFYPTGPPVPFVTMLPLYNFPTESSDTSTSNFNLEEGADNSDSSQNFDSSEGYEHP 987

Query: 121  ESV---NSMTRAAIESSEHKADILNSDFVSHWQNLQFGRFCQTSRHXXXXXXXXXXXXXX 177
            E     NSMTR AIESSEH+ DILNSDFVSHWQNLQ+GRFCQ SRH              
Sbjct: 988  EVSSPSNSMTRVAIESSEHRPDILNSDFVSHWQNLQYGRFCQNSRHPPSMTYPSPVMVPP 1047

Query: 178  AYLQGRYPLDGPGRP---DMNLFAQLMSYGPRVVPAAPLQSVSTRPTNMYQRFADDMPRY 234
             YLQGRYP DGPGRP   +MN+F+QLMSYGPR+VP APLQSVS RP ++YQR+ DDMPRY
Sbjct: 1048 VYLQGRYPWDGPGRPISGNMNIFSQLMSYGPRLVPVAPLQSVSNRPASIYQRYVDDMPRY 1107

Query: 235  RSGTGTYLPNPKASARDRHPTXXXXXXXXXXXXXHHSDREGNWNMNPKLRATGRGHNRNQ 294
            RSGTGTYLPNPK SARDRH T             HH DREGNWN N KLR TGRGHNRNQ
Sbjct: 1108 RSGTGTYLPNPKVSARDRHSTNTRRGNYPYDRSDHHGDREGNWNTNSKLRGTGRGHNRNQ 1167

Query: 295  AEKLNSKPERL-TSESRGERPWNAHRHDSFISHQNGPVRAGSSQNNPANAAYGMYSIPGM 353
             EK NSK ERL TSESR ERPW +HRHD+FI HQNGPVR+ SSQ+NP+N AYGMY +P M
Sbjct: 1168 TEKPNSKMERLATSESRAERPWGSHRHDTFIPHQNGPVRSNSSQSNPSNVAYGMYPMPAM 1227

Query: 354  NPGGVSSSGQPMPSVVMLYPYDHSGGYSPSAEQLEFGSLGPMGFPGVNELAHPNEGSHSG 413
            NP GVSS+G  MPSVVM YPYDH+ GY   AEQLEFG+LG MGF GVNEL+  NEGS S 
Sbjct: 1228 NPSGVSSNGPTMPSVVMFYPYDHNTGYGSPAEQLEFGTLGSMGFSGVNELSQANEGSQSS 1287

Query: 414  EALEDQRFHGASAQRASPDQPSSPHISR 441
             A EDQRF G   QR+SPDQPSSPH+SR
Sbjct: 1288 GAHEDQRFRGGHGQRSSPDQPSSPHVSR 1315


>Glyma16g02900.1 
          Length = 1321

 Score =  600 bits (1546), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 306/450 (68%), Positives = 339/450 (75%), Gaps = 9/450 (2%)

Query: 1    MASDMSERGTGPSPGTSMHVPRHQTSGFEATQTSGPDSPLTIAPVLLGPGSRHRAIGNSG 60
            MAS++SER   P+  TSMHVPR+Q SGFE  QTSG DSPL I+PVLLGPGSR R   NSG
Sbjct: 874  MASNISERSIWPTSSTSMHVPRNQISGFETAQTSGSDSPLPISPVLLGPGSRQR--DNSG 931

Query: 61   VVPYAFYPTGPPVPFVTMVPFYNFSTESSDTSTNNFSVEEGADNSGSGPNFDSSEGYNR- 119
            VVP+ FYPTGPPVPFVTM+P YNF TESSDTST+NF++EEGADNS S  NFDSSEGY   
Sbjct: 932  VVPFTFYPTGPPVPFVTMLPLYNFPTESSDTSTSNFNLEEGADNSDSSQNFDSSEGYEHP 991

Query: 120  --SESVNSMTRAAIESSEHKADILNSDFVSHWQNLQFGRFCQTSRHXXXXXXXXXXXXXX 177
              S   NSMTR AIESSEHK+DILNSDFVSHWQNLQ+GRFCQ SR               
Sbjct: 992  GVSSPSNSMTRVAIESSEHKSDILNSDFVSHWQNLQYGRFCQNSRLPPSMTYPSPGMVPP 1051

Query: 178  AYLQGRYPLDGPGRP---DMNLFAQLMSYGPRVVPAAPLQSVSTRPTNMYQRFADDMPRY 234
             YLQGRYP DGPGRP   +MN+F+QLM+YGPR+VP APLQSVS RP N+YQR+ DDMPRY
Sbjct: 1052 VYLQGRYPWDGPGRPISGNMNIFSQLMNYGPRLVPVAPLQSVSNRPANIYQRYVDDMPRY 1111

Query: 235  RSGTGTYLPNPKASARDRHPTXXXXXXXXXXXXXHHSDREGNWNMNPKLRATGRGHNRNQ 294
            RSGTGTYLPNPK SARDRH T             HH DREGNWN N KLR TGRGHNRNQ
Sbjct: 1112 RSGTGTYLPNPKVSARDRHSTNTRRGNYNYDRSDHHGDREGNWNTNSKLRGTGRGHNRNQ 1171

Query: 295  AEKLNSKPERLTSESRGERP-WNAHRHDSFISHQNGPVRAGSSQNNPANAAYGMYSIPGM 353
             EK NSK ERL+S        W +HRHD+FI HQNGPV + S Q+NP+N AYGMY IP M
Sbjct: 1172 NEKPNSKTERLSSSESRAERSWGSHRHDNFIPHQNGPVGSNSLQSNPSNVAYGMYPIPAM 1231

Query: 354  NPGGVSSSGQPMPSVVMLYPYDHSGGYSPSAEQLEFGSLGPMGFPGVNELAHPNEGSHSG 413
            NP G SS+G  MPSVVM YPYDH+ GY   AEQLEFG+LGPMGF GVNEL+  NEG+ S 
Sbjct: 1232 NPSGFSSNGPTMPSVVMFYPYDHNTGYGSPAEQLEFGTLGPMGFSGVNELSQANEGTQSS 1291

Query: 414  EALEDQRFHGASAQRASPDQPSSPHISRGP 443
             A EDQRF G  +QR+SPDQPSSPH+SRGP
Sbjct: 1292 GAHEDQRFRGGHSQRSSPDQPSSPHVSRGP 1321