Miyakogusa Predicted Gene
- Lj3g3v2438640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2438640.1 tr|B9IDX7|B9IDX7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_824545 PE=4
SV=1,41.91,0.000000000007,SUBFAMILY NOT NAMED,NULL;
TOPOISOMERASE-RELATED PROTEIN,NULL; seg,NULL,CUFF.44001.1
(1335 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318086 similar to UniRef100_A7PZU6 Cluster: Chromosom... 1324 0.0
>gnl|LJGI|FS318086 similar to UniRef100_A7PZU6 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 758
Score = 1324 bits (668), Expect = 0.0
Identities = 734/755 (97%), Gaps = 12/755 (1%)
Strand = Plus / Plus
Query: 229 acgatggttcctttttataatttttcaactgagtcttctgacacatcaactaacaacttc 288
|||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||
Sbjct: 7 acgatggttcctttttataactttccaactgagtcttctgacacatcaactagcaacttc 66
Query: 289 agtgtggaagaaggggcagataatagtggttcaggtccgaattttgattcatctgaggga 348
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 67 agtctggaagaaggggcagataatagtggttcaggtccgaattttgattcatccgaggga 126
Query: 349 tacaaccggtctgag---tcagtc------aattctatgacacgagcagctattgagtca 399
|| ||||||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct: 127 tatgaccggtctgaggtgtcaagcccttccaattctatgacacgagcagctattgagtca 186
Query: 400 tcagagcacaaggctgacattcttaatagtgactttgttagccactggcaaaatttgcaa 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tcagagcacaaggctgacattcttaatagtgactttgttagccactggcaaaatttgcaa 246
Query: 460 tttgggcgattctgtcaaacctcacgtcatccaccttcaatgatgtatccttcacctgtt 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tttgggcgattctgtcaaacctcacgtcatccaccttcaatgatgtatccttcacctgtt 306
Query: 520 atggtacctcctgcttatttgcagggtcgttatcctttggatggtccgggaagacctgac 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atggtacctcctgcttatttgcagggtcgttatcctttggatggtccgggaagacctgac 366
Query: 580 atgaatctttttgcccagcttatgagctatgggccacgagtagttcctgcggctcctctc 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 atgaatctttttgcccagcttatgagctatgggccacgagtagttcctgcggctcctctc 426
Query: 640 cagtcagtttcgactagacctacaaatatgtaccaacggtttgctgatgatatgcctcgg 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cagtcagtttcgactagacctacaaatatgtaccaacggtttgctgatgatatgcctcgg 486
Query: 700 tatcgaagtgggactggaacctacctgccaaatcctaaggcttctgctcgggatcgacat 759
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 487 tatcgaagtgggactggaacctacctgccaaatcct---gcttctgctcgggatcgacat 543
Query: 760 cccacaaataacagaagggcaaattacaactatgacagaaatgaccatcacagtgataga 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cccacaaataacagaagggcaaattacaactatgacagaaatgaccatcacagtgataga 603
Query: 820 gaaggaaattggaacatgaacccaaagttgcgagcaactgggcgtggccataatcgaaac 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gaaggaaattggaacatgaacccaaagttgcgagcaactgggcgtggccataatcgaaac 663
Query: 880 caagctgagaagctcaactcaaagccagagaggttgactagtgagagccgtggtgagaga 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 caagctgagaagctcaactcaaagccagagaggttgactagtgagagccgtggtgagaga 723
Query: 940 ccatggaatgcacatagacatgactccttcatttc 974
|||||||||||||||||||||||||||||||||||
Sbjct: 724 ccatggaatgcacatagacatgactccttcatttc 758