Miyakogusa Predicted Gene

Lj3g3v2402900.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2402900.2 tr|B9IB00|B9IB00_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_573172 PE=4
SV=1,60,6e-16,seg,NULL,CUFF.43971.2
         (678 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82178 similar to UniRef100_Q0ILX9 Cluster: Os12g06140...   539   e-153

>gnl|LJGI|TC82178 similar to UniRef100_Q0ILX9 Cluster: Os12g0614000 protein; n=1;
           Oryza sativa Japonica Group|Rep: Os12g0614000 protein -
           Oryza sativa subsp. japonica (Rice), partial (32%)
          Length = 590

 Score =  539 bits (272), Expect = e-153
 Identities = 272/272 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatcctgaagtcaaaaagtttggaggaggaccaagggagttgacaggtgctgtggat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atggatcctgaagtcaaaaagtttggaggaggaccaagggagttgacaggtgctgtggat 378

                                                                       
Query: 61  cttataagtcatttcaaattactaccccactatgagtttttctgcaagaggccgcttcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cttataagtcatttcaaattactaccccactatgagtttttctgcaagaggccgcttcct 438

                                                                       
Query: 121 gtgtcagttgcagacacacactatcttcataatgtagttggggacacagaagtacgaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtgtcagttgcagacacacactatcttcataatgtagttggggacacagaagtacgaaaa 498

                                                                       
Query: 181 ggagatgggatgcaactagatcaacttattcagaacgcatcttcctccagagatacaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggagatgggatgcaactagatcaacttattcagaacgcatcttcctccagagatacaaat 558

                                           
Query: 241 gcccgtatacagccttttgacttggatgttct 272
           ||||||||||||||||||||||||||||||||
Sbjct: 559 gcccgtatacagccttttgacttggatgttct 590