Miyakogusa Predicted Gene

Lj3g3v2261390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2261390.1 Non Chatacterized Hit- tr|I3SU62|I3SU62_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.34,0,SYS1,Integral membrane protein SYS1-related; seg,NULL;
SYS1,NULL,CUFF.43747.1
         (152 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79990.1 | Symbols:  | structural molecules | chr1:30084522-3...   199   8e-52
AT1G79990.4 | Symbols:  | structural molecules | chr1:30084522-3...   195   8e-51
AT1G79990.2 | Symbols:  | structural molecules | chr1:30084522-3...   195   8e-51

>AT1G79990.1 | Symbols:  | structural molecules |
           chr1:30084522-30091949 FORWARD LENGTH=1135
          Length = 1135

 Score =  199 bits (505), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 90/151 (59%), Positives = 107/151 (70%)

Query: 1   MFYGAVVWDPWLIVAQIVCLQCMYYIXXXXXXXXXXXXXXXXMSLVYFFDYVTISTSTVT 60
           MFYG  VWDPWLIV QI+CLQC YY+                +SLVYFFDY T++TST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWXXXXXXXXXXXXXXXYMLYLIERAKKCLDFSATLYIIHLFLCIVYGGWPSAITWWIVN 120
           GW               YM++L+ERA+KCLDFSATLYIIHLF CI+YGGWPS++ WW+VN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGIAVMALLGEYLCIRRELQEIPITRLRSN 151
           GTG+AVMALL EYLCI+RE +EIP+ R  SN
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSN 151


>AT1G79990.4 | Symbols:  | structural molecules |
           chr1:30084522-30085194 FORWARD LENGTH=152
          Length = 152

 Score =  195 bits (496), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 90/152 (59%), Positives = 107/152 (70%)

Query: 1   MFYGAVVWDPWLIVAQIVCLQCMYYIXXXXXXXXXXXXXXXXMSLVYFFDYVTISTSTVT 60
           MFYG  VWDPWLIV QI+CLQC YY+                +SLVYFFDY T++TST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWXXXXXXXXXXXXXXXYMLYLIERAKKCLDFSATLYIIHLFLCIVYGGWPSAITWWIVN 120
           GW               YM++L+ERA+KCLDFSATLYIIHLF CI+YGGWPS++ WW+VN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGIAVMALLGEYLCIRRELQEIPITRLRSNV 152
           GTG+AVMALL EYLCI+RE +EIP+ R  S V
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152


>AT1G79990.2 | Symbols:  | structural molecules |
           chr1:30084522-30085194 FORWARD LENGTH=152
          Length = 152

 Score =  195 bits (496), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 90/152 (59%), Positives = 107/152 (70%)

Query: 1   MFYGAVVWDPWLIVAQIVCLQCMYYIXXXXXXXXXXXXXXXXMSLVYFFDYVTISTSTVT 60
           MFYG  VWDPWLIV QI+CLQC YY+                +SLVYFFDY T++TST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWXXXXXXXXXXXXXXXYMLYLIERAKKCLDFSATLYIIHLFLCIVYGGWPSAITWWIVN 120
           GW               YM++L+ERA+KCLDFSATLYIIHLF CI+YGGWPS++ WW+VN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 GTGIAVMALLGEYLCIRRELQEIPITRLRSNV 152
           GTG+AVMALL EYLCI+RE +EIP+ R  S V
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152