Miyakogusa Predicted Gene

Lj3g3v2174830.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v2174830.1 Non Chatacterized Hit- tr|C0HFA5|C0HFA5_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,48.81,0.0000000000001,seg,NULL; SHIKIMATE KINASE,NULL;
SKI,Shikimate kinase; CS,CS domain; HSP20-like
chaperones,HSP20-lik,CUFF.43623.1
         (392 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g01890.1                                                       545   e-155
Glyma07g18490.1                                                       259   5e-69
Glyma09g34010.1                                                       184   2e-46
Glyma08g37810.1                                                       101   2e-21
Glyma15g22340.1                                                        71   2e-12
Glyma16g09810.1                                                        70   5e-12

>Glyma01g01890.1 
          Length = 366

 Score =  545 bits (1403), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 268/357 (75%), Positives = 292/357 (81%), Gaps = 8/357 (2%)

Query: 26  FLFRHPTTTSFHFSVSKPNVVXXXXXXXXXXXXXXXXHKFNPVLRPCKCSYTAPVPTTTY 85
           +L  +PTT + +FSV KPNV+                 K    LRPCKCS TAPV TTTY
Sbjct: 10  YLSTNPTTRNLNFSVLKPNVLSLRSFSLP--------QKHYLRLRPCKCSSTAPVSTTTY 61

Query: 86  EFSDGSSEMELRLNIGGLDIQSTRDISVDANDSSLAIKVLRSGSPLTLIETNPLFDRIKP 145
           EFSDGSSE+ELRLNIGGLD++S+RDI VD ND+SLAI+VLR GSP+TLIETNPLFDR+K 
Sbjct: 62  EFSDGSSEVELRLNIGGLDVRSSRDILVDTNDTSLAIRVLRPGSPITLIETNPLFDRVKS 121

Query: 146 SETIWYIDEDQLVVNFKKQDPDLKWPDIMESWESLAAGSTQLLQGTSIYLVGDSTEINQK 205
           SETIWYID+DQLVVNFKKQDPDLKWPDIMESWESL AGS QLLQGTSIYLVGDSTEINQK
Sbjct: 122 SETIWYIDDDQLVVNFKKQDPDLKWPDIMESWESLTAGSPQLLQGTSIYLVGDSTEINQK 181

Query: 206 VAQELAIGLGYTPLNTKELLEAYTKQTVDSWLLAEGPDXXXXXXXXXXXXXXXYARAVVA 265
           VAQELA GLGYTPL+TKELLE YTKQTVDSWLLAEG D               +ARAVVA
Sbjct: 182 VAQELATGLGYTPLSTKELLELYTKQTVDSWLLAEGSDSVAEAESAVLESISSHARAVVA 241

Query: 266 TLGGKQGASRRSDKWQHLHAGFTVWLSQTEATDEDSAREEAHKSVKDSTIAYTNADVVVK 325
           TLGG+  A+ R+ KWQHL+AGFTVWLS+TEA DEDSAR E HK+VKD  I+YTNADVVVK
Sbjct: 242 TLGGQHSAAGRAGKWQHLYAGFTVWLSKTEALDEDSARLETHKNVKDGIISYTNADVVVK 301

Query: 326 FQGWDPAYVKSVAQACLRALKQLILSDKKLPGKKSLYIRLGCRGDWPNIEPPGWDPS 382
            QGWDPAY KSVAQACL ALKQLI SDKKLPGKKSLYIRLGCRGDWPNI+PPGWDPS
Sbjct: 302 LQGWDPAYAKSVAQACLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPS 358


>Glyma07g18490.1 
          Length = 1185

 Score =  259 bits (661), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 134/197 (68%), Positives = 152/197 (77%), Gaps = 16/197 (8%)

Query: 94  MELRLNIGGLDIQSTRDISVDANDSSLAIKVLRSGSPLTLIETNPLFDRIKPSETIWYID 153
           MELRLNIGGLD++S+RDISVD ND+SLAI +LR GSP+TLIETNPLFDR+K SETIWYID
Sbjct: 1   MELRLNIGGLDVRSSRDISVDTNDTSLAI-ILRPGSPITLIETNPLFDRVKSSETIWYID 59

Query: 154 EDQLVVNFKKQDPDLKWPDIMESWESLAAGSTQLLQGTSIYLVGDSTEINQKVAQELAIG 213
           +DQLVVNFKKQDPDL+WPDIMESWESL AGS QLL+GTSIYLV             L I 
Sbjct: 60  DDQLVVNFKKQDPDLRWPDIMESWESLIAGSPQLLEGTSIYLV------------VLGIL 107

Query: 214 LGYTPLNTKELLEAYTKQTVDSWLLAEGPDXXXXXXXXXXXXXXXYARAVVATLGGKQGA 273
           L YTPL+TKELLE YTKQTVD WLLAEG +                +RAVVA+LGG+  A
Sbjct: 108 LRYTPLSTKELLELYTKQTVDLWLLAEGSN---LVPEAESVVLESISRAVVASLGGQHSA 164

Query: 274 SRRSDKWQHLHAGFTVW 290
           +RR DKWQHL+AGFT +
Sbjct: 165 ARRDDKWQHLYAGFTCF 181


>Glyma09g34010.1 
          Length = 118

 Score =  184 bits (467), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/124 (74%), Positives = 99/124 (79%), Gaps = 14/124 (11%)

Query: 259 YARAVVATLGGKQGASRRSDKWQHLHAGFTVWLSQTEATDEDSAREEAHKSVKDSTIAYT 318
           +ARAVVATLGG           QH   G TVWLS+TEA DEDSA +E HK+VKD  I+YT
Sbjct: 8   HARAVVATLGG-----------QH---GLTVWLSKTEALDEDSAPQETHKNVKDGIISYT 53

Query: 319 NADVVVKFQGWDPAYVKSVAQACLRALKQLILSDKKLPGKKSLYIRLGCRGDWPNIEPPG 378
           NADVVVK  GWDPAY K+VAQACL ALKQLI SDKKLPGKKSLYIRLGCRGDWPNI+PPG
Sbjct: 54  NADVVVKLPGWDPAYAKNVAQACLSALKQLIKSDKKLPGKKSLYIRLGCRGDWPNIKPPG 113

Query: 379 WDPS 382
           WDPS
Sbjct: 114 WDPS 117


>Glyma08g37810.1 
          Length = 62

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/61 (81%), Positives = 54/61 (88%)

Query: 154 EDQLVVNFKKQDPDLKWPDIMESWESLAAGSTQLLQGTSIYLVGDSTEINQKVAQELAIG 213
           +DQLVVNFKKQDPDL+W DIMESWESL A S QLLQGTSIY+VGDSTEINQK AQ+LA  
Sbjct: 1   DDQLVVNFKKQDPDLRWLDIMESWESLTARSPQLLQGTSIYIVGDSTEINQKGAQKLATD 60

Query: 214 L 214
           L
Sbjct: 61  L 61


>Glyma15g22340.1 
          Length = 74

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/50 (72%), Positives = 40/50 (80%)

Query: 165 DPDLKWPDIMESWESLAAGSTQLLQGTSIYLVGDSTEINQKVAQELAIGL 214
           +PDL+W DIMES ESL  GS QLLQGT  Y+VGDSTEINQK AQ+LA  L
Sbjct: 24  NPDLRWLDIMESSESLTVGSPQLLQGTPTYIVGDSTEINQKGAQKLATDL 73


>Glyma16g09810.1 
          Length = 312

 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 40/57 (70%)

Query: 176 SWESLAAGSTQLLQGTSIYLVGDSTEINQKVAQELAIGLGYTPLNTKELLEAYTKQT 232
           SWESL AGS QLLQGTSIY+VGDSTEINQK AQ+LA  LGY        +  Y  +T
Sbjct: 169 SWESLTAGSPQLLQGTSIYIVGDSTEINQKGAQKLATDLGYLESICTNQIHIYVNKT 225