Miyakogusa Predicted Gene
- Lj3g3v2174830.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2174830.1 Non Chatacterized Hit- tr|C0HFA5|C0HFA5_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,48.81,0.0000000000001,seg,NULL; SHIKIMATE KINASE,NULL;
SKI,Shikimate kinase; CS,CS domain; HSP20-like
chaperones,HSP20-lik,CUFF.43623.1
(1182 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62663 similar to UniRef100_O82290 Cluster: Expressed ... 1933 0.0
>gnl|LJGI|TC62663 similar to UniRef100_O82290 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis
thaliana (Mouse-ear cress), partial (77%)
Length = 1231
Score = 1933 bits (975), Expect = 0.0
Identities = 992/1000 (99%)
Strand = Plus / Plus
Query: 183 atctcacaaattcaatcctgttctgcgtccctgcaagtgttcctacactgcccctgttcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 atctcacaaattcaatcctgttctgcgtccctgcaagtgttcctacactgcccctgttcc 220
Query: 243 gactacaacctacgagttttctgatgggtcttcagagatggagctaagattaaacatagg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gactacaacctacgagttttctgatgggtcttcagagatggagctaagattaaacatagg 280
Query: 303 aggcttggatatacaaagcaccagagacatatcggttgatgcaaacgattcctctttagc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aggcttggatatacaaagcaccagagacatatcggttgatgcaaacgattcctctttagc 340
Query: 363 tatcaaagttttgcgttcagggtctcccctcacattgattgaaactaatcctctttttga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tatcaaagttttgcgttcagggtctcccctcacattgattgaaactaatcctctttttga 400
Query: 423 caggattaaaccctctgagacaatatggtatatagatgaagatcagctggtggtgaattt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 caggattaaaccctctgagacaatatggtatatagatgaagatcagctggtggtgaattt 460
Query: 483 caagaagcaggaccctgatttgaaatggcctgacattatggagtcatgggaatcacttgc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 caagaagcaggaccctgatttgaaatggcctgacattatggagtcatgggaatcacttgc 520
Query: 543 tgcaggatctacacagcttttgcaaggaacatcgatatatctcgttggcgattccaccga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tgcaggatctacacagcttttgcaaggaacatcgatatatctcgttggcgattccaccga 580
Query: 603 aatcaaccagaaagtggctcaagagctcgctattggtctcgggtacacaccgcttaatac 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aatcaaccagaaagtggctcaagagctcgctattggtctcgggtacacaccgcttaatac 640
Query: 663 aaaggagctgctggaagcatataccaagcaaaccgtggattcatggctgcttgctgaagg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aaaggagctgctggaagcatataccaagcaaaccgtggattcatggctgcttgctgaagg 700
Query: 723 ccctgactcagtagcagaagctgaaagctccgtacttgaaagcataagtagttatgcaag 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ccctgactcagtagcagaagctgaaagctccgtacttgaaagcataagtagttatgcaag 760
Query: 783 ggcagtggttgcaacgttaggagggaaacagggtgccagtcgaagatctgataaatggca 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 ggcagtggttgcaacgttaggagggaaacagggtgccagtcgaagatctgataaatggca 820
Query: 843 acatcttcatgcaggatttacggtctggttgtcacagactgaagcaacagatgaagattc 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 acatcttcatgcaggatttacggtctggttgtcacagactgaagcaacagatgaagattc 880
Query: 903 tgcaagggaggaggcccacaaaagcgtcaaagatagcacaattgcatacacaaatgcgga 962
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 881 tgcaagggaggaggcccacaaaagcgtcaaagataacacaattgcatacacaaatgcgga 940
Query: 963 tgtggttgtcaagtttcagggctgggatcctgcgtatgtcaagagtgtagcacaagcatg 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 tgtggttgtcaagtttcagggctgggatcctgcgtatgtcaagagtgtagcacaagcatg 1000
Query: 1023 tttgagagccctaaaacagttaatcctgtcagacaagaaacttccaggtnnnnnnngcct 1082
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1001 tttgagagccctaaaacagttaatcctgtcagacaagaaacttccaggtaaaaaaagcct 1060
Query: 1083 ctacataagattgggatgtcgtggcgattggccaaacatcgaacccccgggttgggatcc 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 ctacataagattgggatgtcgtggcgattggccaaacatcgaacccccgggttgggatcc 1120
Query: 1143 atcaagtgaaagtgatgtcactcttggcacgcaatagtga 1182
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 atcaagtgaaagtgatgtcactcttggcacgcaatagtga 1160
Score = 254 bits (128), Expect = 1e-66
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 24 atcagttatctctctatctactgaaatgtcagctactcttacaggttcaagcttcctctt 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atcagttatctctctatctactgaaatgtcagctactcttacaggttcaagcttcctctt 61
Query: 84 ccgacaccccaccaccacaagcttccacttctcagtttcaaaacctaatgtggtttcaca 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ccgacaccccaccaccacaagcttccacttctcagtttcaaaacctaatgtggtttcaca 121
Query: 144 gtcactac 151
||||||||
Sbjct: 122 gtcactac 129