Miyakogusa Predicted Gene

Lj3g3v1929790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1929790.1 Non Chatacterized Hit- tr|I1R145|I1R145_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,30.94,4e-18,no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.43330.1
         (524 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G56220.1 | Symbols:  | P-loop containing nucleoside triphosph...   490   e-139
AT4G23440.1 | Symbols:  | Disease resistance protein (TIR-NBS cl...   241   7e-64

>AT5G56220.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:22754871-22757792
           FORWARD LENGTH=973
          Length = 973

 Score =  490 bits (1262), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 276/471 (58%), Positives = 327/471 (69%), Gaps = 21/471 (4%)

Query: 45  IESSP-YESPLVSPPSSAFVSALQSPYISPRAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 103
           I++SP Y   LVSPPSSAFVSALQSPYISPRA                            
Sbjct: 46  IKNSPFYSPSLVSPPSSAFVSALQSPYISPRATTPSITTHKPSPPLSYKGSQS------- 98

Query: 104 EDVXXXXXXXXXXXXEFSDDT-ADTNFKY-MTCVPFPEAAPPRISFSFPVPRVSFAKGPV 161
           +DV            EFSD+  +D   K   +C P P  APPRISFSFPVPRVS AK  V
Sbjct: 99  DDVPSSSYTPPSDQYEFSDEQPSDRKLKLSASCTPDP--APPRISFSFPVPRVSLAKVSV 156

Query: 162 S-PATNAKLRSCDVYIGFHGQNPNLIRFCKWLKSELELQGIDCLLADRAKYSDSQSHEIA 220
           S PATN KLRS DV+IGFHGQNPNL+RFCKWLKSELELQGI C +ADRAKYSD+QSHEIA
Sbjct: 157 SSPATNTKLRSSDVFIGFHGQNPNLVRFCKWLKSELELQGIACFVADRAKYSDTQSHEIA 216

Query: 221 DSVICSVSFGLVVVTSSSFLNHLSMEEVRFFAQKKNLIPILFDTGPAEIMALFN-NSVDK 279
           D VICSV++G+VVV+ SS LN+LS+EEVRFFAQKKNLIPI + TGP+EIM L N N++DK
Sbjct: 217 DRVICSVTYGIVVVSCSSLLNYLSLEEVRFFAQKKNLIPIFYGTGPSEIMGLLNCNAIDK 276

Query: 280 ECKEAFDGLMKCNEFNLEANDGNWRSCISKVSGILKARLGRKTSEQQKDSMQGFESSLPF 339
           ECKEA DGL+K +EF LEAN+ NWRSC+ K + IL+A+LGRK S   K+ ++G +  LPF
Sbjct: 277 ECKEAIDGLIKSHEFKLEANESNWRSCVGKTATILRAKLGRK-SVADKEIVEGID-ELPF 334

Query: 340 PRNSYFVGREKEIMEIEGLFFGQVQDHCRTVLKGEACGSGQSEGLADEESEPVISKGGRY 399
           PRN  F+GREKEI+E+E   FG  +    T        SGQSEGLADEES+ V ++ G++
Sbjct: 335 PRNRSFLGREKEIIEMEMALFGNGEYLESTTPSTRGEASGQSEGLADEESDVVPTRNGKF 394

Query: 400 ISLEIGRNKEPPLEAWVEPVIGN---KRLXXXXXXXXXX--XXXXXVVCINGVSGIGKSE 454
           ISLE+GR  +   EAW +P  G    KRL                 VVC+NGV GIGK+E
Sbjct: 395 ISLELGRCSDSRSEAWSDPNGGKNSLKRLLKTKKCRNNSNCKSSTSVVCVNGVPGIGKTE 454

Query: 455 LALEFAHRYYQRYKMVLWVGGEARYLRQNILNLSLNLGLDVGADSEMERGK 505
           LALEFA+RY QRYKMVLWVGGEARY RQN+LNLS +LGLDV AD+E +RG+
Sbjct: 455 LALEFAYRYSQRYKMVLWVGGEARYFRQNLLNLSFSLGLDVSADAEKDRGR 505


>AT4G23440.1 | Symbols:  | Disease resistance protein (TIR-NBS
           class) | chr4:12237765-12240659 FORWARD LENGTH=964
          Length = 964

 Score =  241 bits (616), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 133/374 (35%), Positives = 209/374 (55%), Gaps = 44/374 (11%)

Query: 168 KLRSCDVYIGFHGQNPNLIRFCKWLKSELELQGIDCLLADRAKYSDSQSHEIADSVICSV 227
           +LR CDV+IG +GQ P+L+RF  WL++ELE QG+ C ++DR +   S+   I +  +   
Sbjct: 128 RLRCCDVFIGLYGQKPSLLRFADWLRAELEFQGMSCFMSDRGRCRSSRKQRIVERAMDGA 187

Query: 228 SFGLVVVTSSSFLNHLSMEEVRFFAQKKNLIPILFDTGPAEIMA---------------- 271
           SFG++++T  +F N  ++EE+RFFA KKNL+P+ FD  P E +                 
Sbjct: 188 SFGVIILTRKAFKNPYTIEELRFFANKKNLVPVFFDLSPGECLVRDIVEKRGDLWEKHGG 247

Query: 272 ---LFNNSVDKECKEAFDGLMKCNEFNLEANDGNWRSCISKVSGILKARLGRKTSEQQ-- 326
              +    ++KE KEA  GL + +++ LEA++GNWR C+ +   +L  RLGR++  ++  
Sbjct: 248 ELWVLYGGIEKEWKEAVHGLSRVDDWKLEAHEGNWRDCVFRAVTLLAMRLGRRSIVERLT 307

Query: 327 KDSMQGFESSLPFPRNSYFVGREKEIMEIEGLFFGQVQ-DHCRTVLKGEA---------- 375
           K   +  +   P+PRN  FVGR+KE+ E+E + FG V  D  R   + +A          
Sbjct: 308 KWRDKAEKEEFPYPRNESFVGRKKELSELEFVLFGDVAGDSERDYFELKARPTRRKKNVT 367

Query: 376 ---CGSGQSEGLADEESEPVISK-GGRYISLEIGRNKEPPLEAWVEPVIGNKRLXXXXXX 431
                SG +E    +  E V+ K   + I ++   + E P  + V+     +R       
Sbjct: 368 LGWNKSGSAEERRKKGKEKVVWKESEKEIEMQ---STEMPSRSQVKVGRNTRR-----KR 419

Query: 432 XXXXXXXXXVVCINGVSGIGKSELALEFAHRYYQRYKMVLWVGGEARYLRQNILNLSLNL 491
                    V C++G SGIGK+EL LEFA+R++QRYKMVLW+GGE+RY+RQN LNL   L
Sbjct: 420 SMKVVYGKGVACVSGESGIGKTELLLEFAYRHHQRYKMVLWIGGESRYIRQNYLNLYQYL 479

Query: 492 GLDVGADSEMERGK 505
            +D+G ++  ++ +
Sbjct: 480 EVDIGIENSSDKTR 493