Miyakogusa Predicted Gene

Lj3g3v1855370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1855370.1 Non Chatacterized Hit- tr|I1M0J2|I1M0J2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37880
PE,76.96,0,SUBFAMILY NOT NAMED,NULL; 80 KDA MCM3-ASSOCIATED
PROTEIN,NULL; SAC3_GANP,SAC3/GANP/Nin1/mts3/eIF-3 p,CUFF.43210.1
         (418 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54380.1 | Symbols:  | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |...   438   e-123
AT3G54380.3 | Symbols:  | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |...   416   e-116
AT3G54380.2 | Symbols:  | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |...   379   e-105
AT3G06290.1 | Symbols:  | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |...   189   5e-48

>AT3G54380.1 | Symbols:  | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |
           chr3:20133985-20136752 REVERSE LENGTH=406
          Length = 406

 Score =  438 bits (1127), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/349 (60%), Positives = 264/349 (75%), Gaps = 1/349 (0%)

Query: 70  HDAPRSSDSGPIVGTCPYMCPEGERVQREKLRDLTVFERLNGNPGKSSSALAVKKFCRTI 129
           H     +D   IVGTC  MCPE ERV RE+LRDL VFERL GNP KSS+ +AVKKFCRT+
Sbjct: 59  HKDEDPADVSLIVGTCSSMCPERERVTRERLRDLAVFERLYGNPSKSSTEIAVKKFCRTL 118

Query: 130 SSKDVQASDLRPLAVLEDTLNFLLSLLESKEHLFEVVHDFIFDRTRSIRQDLTMQNIATK 189
           S+ DVQASD+RPL VLE+TL +LLSLL+SKEH FEVVHDFIFDRTRSIRQDL++QN+A +
Sbjct: 119 SAADVQASDVRPLPVLEETLRYLLSLLDSKEHPFEVVHDFIFDRTRSIRQDLSIQNLANE 178

Query: 190 KAICMYEGMVKFHVVSHYKLWCSVSDPKITSMRHLNMEQLTKTLASLFNLYEANRISNYV 249
           + I +YE MVKFHV+SH +L  S S   I+SM HLNMEQL KTL SL+N+Y+ANR  +Y+
Sbjct: 179 RVIYLYEEMVKFHVISHERLQ-SCSGTSISSMHHLNMEQLAKTLTSLYNIYDANRKPDYI 237

Query: 250 HENEAEFCSLYVLLHLGSHSKPMGEPLSFWFSHVSAPILKSKEMCFARRILRSFRLGNYK 309
           +ENEAEF SLYVLLHL   S  MGEPLS WF  ++  ++KSKE+CF R +LR +R+GNYK
Sbjct: 238 YENEAEFRSLYVLLHLNPSSGVMGEPLSLWFRKLTFALVKSKEICFVRNLLRLYRMGNYK 297

Query: 310 DFFCTAAAQATYLQYCIMEPYINEVRALALSCINFGSYKLHPYPLFDLSKHLMIKESDLE 369
           +F    A++ATYLQYCI E +I E+R +A+  IN   YKL PYPL  LS++L +KE D+E
Sbjct: 298 NFLSRTASEATYLQYCISEHHIREMRLVAVQYINNVCYKLQPYPLLRLSQNLKMKELDVE 357

Query: 370 SLCNSCGLETCTDESGNKLLPTKQSTFSHPKGGFQSYSFLGLQEYEGQI 418
           SLC+ CGLETCTD  G  +LP KQSTF  P+  F+ Y  +G++  +  I
Sbjct: 358 SLCHECGLETCTDPDGFTVLPVKQSTFRSPEDKFKVYDLIGIERIKMSI 406


>AT3G54380.3 | Symbols:  | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |
           chr3:20133985-20136378 REVERSE LENGTH=334
          Length = 334

 Score =  416 bits (1069), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/326 (61%), Positives = 252/326 (77%), Gaps = 1/326 (0%)

Query: 93  ERVQREKLRDLTVFERLNGNPGKSSSALAVKKFCRTISSKDVQASDLRPLAVLEDTLNFL 152
           ERV RE+LRDL VFERL GNP KSS+ +AVKKFCRT+S+ DVQASD+RPL VLE+TL +L
Sbjct: 10  ERVTRERLRDLAVFERLYGNPSKSSTEIAVKKFCRTLSAADVQASDVRPLPVLEETLRYL 69

Query: 153 LSLLESKEHLFEVVHDFIFDRTRSIRQDLTMQNIATKKAICMYEGMVKFHVVSHYKLWCS 212
           LSLL+SKEH FEVVHDFIFDRTRSIRQDL++QN+A ++ I +YE MVKFHV+SH +L  S
Sbjct: 70  LSLLDSKEHPFEVVHDFIFDRTRSIRQDLSIQNLANERVIYLYEEMVKFHVISHERLQ-S 128

Query: 213 VSDPKITSMRHLNMEQLTKTLASLFNLYEANRISNYVHENEAEFCSLYVLLHLGSHSKPM 272
            S   I+SM HLNMEQL KTL SL+N+Y+ANR  +Y++ENEAEF SLYVLLHL   S  M
Sbjct: 129 CSGTSISSMHHLNMEQLAKTLTSLYNIYDANRKPDYIYENEAEFRSLYVLLHLNPSSGVM 188

Query: 273 GEPLSFWFSHVSAPILKSKEMCFARRILRSFRLGNYKDFFCTAAAQATYLQYCIMEPYIN 332
           GEPLS WF  ++  ++KSKE+CF R +LR +R+GNYK+F    A++ATYLQYCI E +I 
Sbjct: 189 GEPLSLWFRKLTFALVKSKEICFVRNLLRLYRMGNYKNFLSRTASEATYLQYCISEHHIR 248

Query: 333 EVRALALSCINFGSYKLHPYPLFDLSKHLMIKESDLESLCNSCGLETCTDESGNKLLPTK 392
           E+R +A+  IN   YKL PYPL  LS++L +KE D+ESLC+ CGLETCTD  G  +LP K
Sbjct: 249 EMRLVAVQYINNVCYKLQPYPLLRLSQNLKMKELDVESLCHECGLETCTDPDGFTVLPVK 308

Query: 393 QSTFSHPKGGFQSYSFLGLQEYEGQI 418
           QSTF  P+  F+ Y  +G++  +  I
Sbjct: 309 QSTFRSPEDKFKVYDLIGIERIKMSI 334


>AT3G54380.2 | Symbols:  | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |
           chr3:20134068-20136752 REVERSE LENGTH=383
          Length = 383

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 185/295 (62%), Positives = 228/295 (77%), Gaps = 1/295 (0%)

Query: 70  HDAPRSSDSGPIVGTCPYMCPEGERVQREKLRDLTVFERLNGNPGKSSSALAVKKFCRTI 129
           H     +D   IVGTC  MCPE ERV RE+LRDL VFERL GNP KSS+ +AVKKFCRT+
Sbjct: 59  HKDEDPADVSLIVGTCSSMCPERERVTRERLRDLAVFERLYGNPSKSSTEIAVKKFCRTL 118

Query: 130 SSKDVQASDLRPLAVLEDTLNFLLSLLESKEHLFEVVHDFIFDRTRSIRQDLTMQNIATK 189
           S+ DVQASD+RPL VLE+TL +LLSLL+SKEH FEVVHDFIFDRTRSIRQDL++QN+A +
Sbjct: 119 SAADVQASDVRPLPVLEETLRYLLSLLDSKEHPFEVVHDFIFDRTRSIRQDLSIQNLANE 178

Query: 190 KAICMYEGMVKFHVVSHYKLWCSVSDPKITSMRHLNMEQLTKTLASLFNLYEANRISNYV 249
           + I +YE MVKFHV+SH +L  S S   I+SM HLNMEQL KTL SL+N+Y+ANR  +Y+
Sbjct: 179 RVIYLYEEMVKFHVISHERLQ-SCSGTSISSMHHLNMEQLAKTLTSLYNIYDANRKPDYI 237

Query: 250 HENEAEFCSLYVLLHLGSHSKPMGEPLSFWFSHVSAPILKSKEMCFARRILRSFRLGNYK 309
           +ENEAEF SLYVLLHL   S  MGEPLS WF  ++  ++KSKE+CF R +LR +R+GNYK
Sbjct: 238 YENEAEFRSLYVLLHLNPSSGVMGEPLSLWFRKLTFALVKSKEICFVRNLLRLYRMGNYK 297

Query: 310 DFFCTAAAQATYLQYCIMEPYINEVRALALSCINFGSYKLHPYPLFDLSKHLMIK 364
           +F    A++ATYLQYCI E +I E+R +A+  IN   YKL PYPL  LS++L +K
Sbjct: 298 NFLSRTASEATYLQYCISEHHIREMRLVAVQYINNVCYKLQPYPLLRLSQNLKMK 352


>AT3G06290.1 | Symbols:  | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |
           chr3:1899123-1907297 REVERSE LENGTH=1697
          Length = 1697

 Score =  189 bits (479), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 180/303 (59%), Gaps = 11/303 (3%)

Query: 81  IVGTCPYMCPEGERVQREKLRDLTVFERLNGNPGKSSSALAVKKFCRTISSKDVQASDLR 140
           I+G CP MCPE ER +RE+  DL  +ER++G+  ++S +LAVKK+ RT    + +A  +R
Sbjct: 481 IIGVCPDMCPESERGERERKGDLDHYERVDGDRNQTSKSLAVKKYTRT---AEREAILIR 537

Query: 141 PLAVLEDTLNFLLSLLESK-EHLFEVVHDFIFDRTRSIRQDLTMQNIATKKAICMYEGMV 199
           P+ +L++T+ +LLSLL+      F  +++F++DR R+IR DL MQ+I  ++AI + E M+
Sbjct: 538 PMPILQNTMEYLLSLLDRPYNENFLGMYNFLWDRMRAIRMDLRMQHIFNQEAITLLEQMI 597

Query: 200 KFHVVSHYKLWCSVSDPKITSM---RHLNMEQLTKTLASLFNLYEANRISNYVHENEAEF 256
           + H+++ ++L C  +  +  S     HLN+EQ+ KT   LF +Y+ +R        E EF
Sbjct: 598 RLHIIAMHEL-CEYTKGEGFSEGFDAHLNIEQMNKTSVELFQMYDDHRKKGITVPTEKEF 656

Query: 257 CSLYVLLHLGSHSKPMGEP--LSFWFSHVSAPILKSKEMCFARRILRSFRLGNYKDFFCT 314
              Y LL L  H     EP  LS   ++++  I ++ E+ FAR + R+ R GN+  FF  
Sbjct: 657 RGYYALLKLDKHPGYKVEPSELSLDLANMTPEIRQTSEVLFARNVARACRTGNFIAFF-R 715

Query: 315 AAAQATYLQYCIMEPYINEVRALALSCINFGSYKLHPYPLFDLSKHLMIKESDLESLCNS 374
            A +A+YLQ C+M  + +++R  AL+ ++ G       P+ D+S  + ++E D+E+L   
Sbjct: 716 LARKASYLQACLMHAHFSKLRTQALASLHSGLQINQGLPVSDMSNWIGMEEEDIEALLEY 775

Query: 375 CGL 377
            G 
Sbjct: 776 HGF 778