Miyakogusa Predicted Gene
- Lj3g3v1680410.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1680410.1 CUFF.42992.1
(1170 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77617 homologue to UniRef100_Q2HS28 Cluster: Transcri... 1019 0.0
gnl|LJGI|TC59178 similar to UniRef100_Q2HS28 Cluster: Transcript... 418 e-116
gnl|LJGI|TC73261 similar to UniRef100_Q2HS29 Cluster: Transcript... 319 2e-86
gnl|LJGI|TC60165 similar to UniRef100_Q2HS29 Cluster: Transcript... 153 3e-36
>gnl|LJGI|TC77617 homologue to UniRef100_Q2HS28 Cluster: Transcription factor IIA,
helical; n=1; Medicago truncatula|Rep: Transcription
factor IIA, helical - Medicago truncatula (Barrel
medic), partial (46%)
Length = 764
Score = 1019 bits (514), Expect = 0.0
Identities = 520/522 (99%)
Strand = Plus / Plus
Query: 1 atggcagcagcagcagcttcctccaccagccaggtctacatcgatgtaatcgaggatgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atggcagcagcagcagcttcctccaccagccaggtctacatcgatgtaatcgaggatgtc 302
Query: 61 atggtcaaggtccgcgacgagttcgtcaacaacggtggtcctggcgaggaagttctcaag 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 303 atggtcaaggtccgcgacgagttcgtcaacaacggtggtcctggagaggaagttctcaag 362
Query: 121 gagcttcaagctatgtgggaatcaaagatgatccaagctggtgtagtgcttggtcctata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gagcttcaagctatgtgggaatcaaagatgatccaagctggtgtagtgcttggtcctata 422
Query: 181 gaaaggtccattgcagctaagccaatgccgggtggtccgattacaccggtgcacgatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaaaggtccattgcagctaagccaatgccgggtggtccgattacaccggtgcacgatctt 482
Query: 241 aatgtgccgtatgaggggactgaggagtatgaaactcctacagctgatttacttttcccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aatgtgccgtatgaggggactgaggagtatgaaactcctacagctgatttacttttcccc 542
Query: 301 cctacgccattgcaaactccaattcaaacccctttaccgggaactgtggataactcatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cctacgccattgcaaactccaattcaaacccctttaccgggaactgtggataactcatat 602
Query: 361 aacattcctactggacctagtgattactcttcttctggcaatgatgcaggagggaatatt 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 603 aacattcctactggacctagtgattactcttcttctggcaatgatgcaagagggaatatt 662
Query: 421 gatgcaaaaggtggaagacctggtccatatatgcagcccccttctccatggatgaacccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gatgcaaaaggtggaagacctggtccatatatgcagcccccttctccatggatgaacccg 722
Query: 481 aggccttcacttgatgtcaatgttgcttacgtggaagggcgg 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 aggccttcacttgatgtcaatgttgcttacgtggaagggcgg 764
>gnl|LJGI|TC59178 similar to UniRef100_Q2HS28 Cluster: Transcription factor IIA,
helical; n=1; Medicago truncatula|Rep: Transcription
factor IIA, helical - Medicago truncatula (Barrel
medic), partial (62%)
Length = 770
Score = 418 bits (211), Expect = e-116
Identities = 542/652 (83%), Gaps = 9/652 (1%)
Strand = Plus / Plus
Query: 16 gcttcctccaccagccaggtctacatcgatgtaatcgaggatgtcatggtcaaggtccgc 75
|||||| ||||||||||||||||| | | || ||||| || ||| | |||||| |||
Sbjct: 124 gcttccaccaccagccaggtctacgttcaggtcatcgacgacgtcgtcaacaaggttcgc 183
Query: 76 gacgagttcgtcaacaacggtggtcctggcgaggaagttctcaaggagcttcaagctatg 135
|| |||||||||||||||| ||||| ||||| ||||| ||||||||||||||| ||||
Sbjct: 184 gatgagttcgtcaacaacgccggtcccggcgacgaagtcctcaaggagcttcaatctatt 243
Query: 136 tgggaatcaaagatgatccaagctggtgtagtgcttggtcctatagaaaggtccattgca 195
|||||||| |||||||| ||||||||||| | |||||||| ||||||||||| |
Sbjct: 244 tgggaatcgaagatgattcaagctggtgtgtttcttggtccaatagaaaggtctggcact 303
Query: 196 gctaagccaatgccgggtggtccgattacaccggtgcacgatcttaatgtgccgtatgag 255
| ||||||| ||| |||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 304 gttaagccagtgcaaggtggtccgattacgccggtgcatgatcttaatgtgccttat--- 360
Query: 256 gggactgaggagtatgaaactcctacagctgatttacttttcccccctacgccattgcaa 315
||||||||||||||||| || || ||||| | |||||||||||||| || |||
Sbjct: 361 ---actgaggagtatgaaacccccactgctgaaatgcttttcccccctaccccggcacaa 417
Query: 316 actccaattcaaacccctttaccgggaactgtggataactca---tataacattcctact 372
|| || |||||||||||||| || ||||||||||||| ||| |||||||||||||||
Sbjct: 418 acacctattcaaacccctttgccaggaactgtggatagctctatgtataacattcctact 477
Query: 373 ggacctagtgattactcttcttctggcaatgatgcaggagggaatattgatgcaaaaggt 432
||||||||||||||| | |||||||| |||||| | |||| ||| | || ||||||
Sbjct: 478 ggacctagtgattacccatcttctgggaatgattctggagccaatgtggagattaaaggt 537
Query: 433 ggaagacctggtccatatatgcagcccccttctccatggatgaacccgaggccttcactt 492
|||||||| |||| || ||||| || |||||||||||||||||||| |||||||| |||
Sbjct: 538 ggaagacccggtctgtacatgcaacctccttctccatggatgaacccaaggccttctctt 597
Query: 493 gatgtcaatgttgcttacgtggaagggcgggatgagccggacagaggaacttcaaatcaa 552
||||||||||||||||| |||||||||||||| ||| | |||||||||| | | ||||||
Sbjct: 598 gatgtcaatgttgcttatgtggaagggcgggacgaggcagacagaggaaatcccaatcaa 657
Query: 553 ccattgacacaggacttcctcgcaatttccactggaaaacgaaaacgcaatgatttgcct 612
|| |||||||||||||| || |||| ||| | || || |||||||| |||| | ||
Sbjct: 658 cccctgacacaggacttcttcacaatgtcctcagggaagcgaaaacgtgatgaagttgct 717
Query: 613 tcacaatataatgctggtggatatatacctcagcaagatggagctggagatg 664
|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tctcaatataatgctggtggatatatacctcagcaagatggagctggagatg 769
>gnl|LJGI|TC73261 similar to UniRef100_Q2HS29 Cluster: Transcription factor IIA,
beta-barrel; n=1; Medicago truncatula|Rep: Transcription
factor IIA, beta-barrel - Medicago truncatula (Barrel
medic), partial (51%)
Length = 568
Score = 319 bits (161), Expect = 2e-86
Identities = 164/165 (99%)
Strand = Plus / Plus
Query: 1006 ctggaccaaggagaggaccaaaatacacatcatctagttttggcccagtttgacaaggtc 1065
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ctggcccaaggagaggaccaaaatacacatcatctagttttggcccagtttgacaaggtc 142
Query: 1066 acacgtaccaagagcaggtggaaatgcacactaaaggatggcatcatgcacataaataat 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 acacgtaccaagagcaggtggaaatgcacactaaaggatggcatcatgcacataaataat 202
Query: 1126 aaggatgttctgttcaataaggcgacaggggagtttgacttctaa 1170
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aaggatgttctgttcaataaggcgacaggggagtttgacttctaa 247
>gnl|LJGI|TC60165 similar to UniRef100_Q2HS29 Cluster: Transcription factor IIA,
beta-barrel; n=1; Medicago truncatula|Rep: Transcription
factor IIA, beta-barrel - Medicago truncatula (Barrel
medic), complete
Length = 1014
Score = 153 bits (77), Expect = 3e-36
Identities = 227/277 (81%)
Strand = Plus / Plus
Query: 632 gatatatacctcagcaagatggagctggagatgtgtcatctagagattttgaaattgagg 691
||||||||||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct: 1 gatatatacctcagcaagatggagctggagatgccagatcccggaattttgaaattgaac 60
Query: 692 tacatggagggggcatctccatcaattcaaatcatactagttttaaagggaaaatgctag 751
| ||||||||||||||||||| | || ||| ||| || ||||| |||||||| ||
Sbjct: 61 tgtatggagggggcatctccattggtgcaggtcaccctacttctaaagagaaaatgccag 120
Query: 752 cagatttggagagacaggcttctaggattcctcaacttgatggaccaattccttacgatg 811
|| |||||||||| | |||||| |||||||||||| ||||||||||||||| || ||||
Sbjct: 121 cacatttggagaggccagcttctcggattcctcaacatgatggaccaattccctatgatg 180
Query: 812 atgatatgctttctactcctaatatttacaattacggaggagtttatactgaagactaca 871
||||| |||||||||| || ||||| || ||||| || ||| | |||||||||||||
Sbjct: 181 atgatgtgctttctaccccaaatatatataattatgggggaacgttcactgaagactaca 240
Query: 872 atgttgcaaatacaccagctccacctgaagtaccagc 908
| |||| || |||||||| || ||||||||||||||
Sbjct: 241 acattgcgaacacaccagcacctcctgaagtaccagc 277
Score = 147 bits (74), Expect = 2e-34
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 1015 ggagaggaccaaaatacacatcatctagttttggcccagtttgacaaggtcacacgtacc 1074
|||||||| || |||||||| ||||| ||| |||||||||||||||| || || || |||
Sbjct: 390 ggagaggatcagaatacacaacatcttgttctggcccagtttgacaaagtgacgcgaacc 449
Query: 1075 aagagcaggtggaaatgcacactaaaggatggcatcatgcacataaataataaggatgtt 1134
|||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||| ||
Sbjct: 450 aagagcagatggaagtgcacactaaaggatggtatcatgcacataaacaataaggatatt 509
Query: 1135 ctgttcaataaggcgacaggggagtttgacttct 1168
|| ||||| ||||||| || || ||||||||||
Sbjct: 510 ctcttcaacaaggcgaatggagaatttgacttct 543