Miyakogusa Predicted Gene

Lj3g3v1340410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1340410.1 Non Chatacterized Hit- tr|D7LM46|D7LM46_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,65.91,0.00000000004,PUTATIVE UNCHARACTERIZED PROTEIN,NULL; SET
AND MYND DOMAIN CONTAINING,NULL; HIT/MYND zinc finger-lik,CUFF.42476.1
         (341 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g32180.1                                                       488   e-138
Glyma13g38290.1                                                       309   2e-84
Glyma18g41560.1                                                       126   4e-29
Glyma13g09120.1                                                       124   1e-28
Glyma19g04810.1                                                        55   1e-07

>Glyma12g32180.1 
          Length = 484

 Score =  488 bits (1255), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/342 (70%), Positives = 275/342 (80%), Gaps = 4/342 (1%)

Query: 1   MEPVCPISSRCASEIXXXXXXXXXXXXXEYYHTLLSTRQCSGITVKQDENFEKGLFAAMD 60
           M+ +CPI  +CA+EI             +YYH LL+ R CSGI VKQD NF KGL+A MD
Sbjct: 1   MDSICPIGLQCATEISALLSPPSPLQVQKYYHDLLTARGCSGIKVKQDGNFGKGLYADMD 60

Query: 61  FKEEELVLKDHMLVGAQHSSNQIDCFVCSYCFRFIGSIEHQIGRRLLFQS-QASESHDCD 119
           FKE ELVLKD MLVGAQH  N+IDC VCS+CF FIGSIE QIGRRL  Q  +A+ESH C+
Sbjct: 61  FKEGELVLKDPMLVGAQHPLNKIDCLVCSFCFCFIGSIELQIGRRLYMQHLRANESHGCE 120

Query: 120 VGNFSGSLDACHKMDSSDEEEGDRLCASASSKAKVPLPEGVVESLLNGQLILPFTEKFSL 179
           VG+ S     CH+MDSSDEEE  + C S SSK KVPLPEG+VESL+NGQL+LPF+EKFSL
Sbjct: 121 VGSSS---KHCHEMDSSDEEESTQQCTSGSSKTKVPLPEGIVESLMNGQLVLPFSEKFSL 177

Query: 180 PSDVPCRGGCGEAYYCSESCEDAGWESSHSLLCTGDSNDPARLVALDKFFKHANDTNDIF 239
           P  VPC GGCGEAYYCS SC +A W SSHSLLCTG+S+D AR  AL KF KHAN+TNDIF
Sbjct: 178 PPAVPCPGGCGEAYYCSMSCAEADWGSSHSLLCTGESSDSARREALLKFIKHANETNDIF 237

Query: 240 ILAAKAISSTILRYRKLKANFLEEQVTYDTSRVSNHCNFSLLLEAWRPISMGHKKRWWDC 299
           +LAAKAISST+L YRKLKA  LEEQ+ ++TS VSNHCN S+LLEAW+PISMGHK+RWWDC
Sbjct: 238 LLAAKAISSTMLMYRKLKAVSLEEQMKHNTSCVSNHCNLSILLEAWKPISMGHKRRWWDC 297

Query: 300 IALPDDIDSSDEASFRMQIKELAFESLQLLKTAIFDKECEAL 341
           IALPDD+DSSDEASFR+QIK LAFESLQLLKTAIFDKECE L
Sbjct: 298 IALPDDVDSSDEASFRLQIKMLAFESLQLLKTAIFDKECEPL 339


>Glyma13g38290.1 
          Length = 547

 Score =  309 bits (792), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 193/421 (45%), Positives = 237/421 (56%), Gaps = 88/421 (20%)

Query: 1   MEPVCPI---------SSRCASEIXXXXXXXXXXXXXEYYHTLLSTRQCSGITVKQDENF 51
           M+ VCPI         +  CA+EI             E+YH LLS R CSGITVKQD N 
Sbjct: 1   MDSVCPIGFYQIYNATNFHCATEISALLTPPSPLQVQEHYHNLLSARGCSGITVKQDGNS 60

Query: 52  EKGLFAAMDFKEEELVLKDHMLVGAQHSSNQIDCFVCSYCFRFIGSIEHQIGRRLLFQS- 110
            KGL+A MDFKE ELVLKD MLVGAQH  N+IDC VCS+CFRF+GSIE QIGR+L  Q  
Sbjct: 61  GKGLYADMDFKEGELVLKDPMLVGAQHPLNKIDCLVCSFCFRFVGSIELQIGRKLYMQQL 120

Query: 111 QASESHDCDVGNFSGSLDACHKMDSSDEEEGDRLCASASSKAK----------------- 153
           +A+ESH CDVG+ S     CH+MDSSDEEE  + C S S K K                 
Sbjct: 121 RANESHGCDVGSSS---KHCHEMDSSDEEESTQQCTSGSPKTKVPLPEDVVQSLMNGQLV 177

Query: 154 ------------VPLPEGVVE------------SLLNGQLILPFTEKF-SLPSDV-PCRG 187
                       VP P G  E            S LN  LI+P    + +LP+++ P R 
Sbjct: 178 LPFSEKFSLPPAVPCPGGCGEAYYCRIVLKYRVSALNYVLIIPSVPDYKTLPTNLRPLRK 237

Query: 188 GCGEAYYCSE------SCEDAGWESSHSLLCTGDSNDPARLVALDKFFKHANDTNDIF-- 239
                 +         +C    W  +  +L +       +LV      +H+ +++++   
Sbjct: 238 VFSLINHIKSVSINCATCHVQRWIGNPPILYSVLLRVLIQLVE-----RHSLNSSNMLMF 292

Query: 240 -------------------ILAAKAISSTILRYRKLKANFLEEQVTYDTSRVSNHCNFSL 280
                              IL   AISST+L+YRKLKA  LE+Q+ +D S VSNHCN S+
Sbjct: 293 NFSEFHVYRMLLEECTCMCILFMHAISSTMLKYRKLKAVSLEKQMKHDISCVSNHCNLSI 352

Query: 281 LLEAWRPISMGHKKRWWDCIALPDDIDSSDEASFRMQIKELAFESLQLLKTAIFDKECEA 340
           LLEAW+PI MGHK+RWWDCIALPDD+DSSDEASFR+QIK LAFESLQLLK AIFDKECE+
Sbjct: 353 LLEAWKPILMGHKRRWWDCIALPDDVDSSDEASFRLQIKMLAFESLQLLKKAIFDKECES 412

Query: 341 L 341
           L
Sbjct: 413 L 413


>Glyma18g41560.1 
          Length = 248

 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 120/249 (48%), Gaps = 71/249 (28%)

Query: 73  LVGAQHSSNQIDCFVCSYCFRFIGSIEHQIGRRLLFQSQASESHDCDVGNFSGSLDACHK 132
           +VGAQH   +IDC VCS+CFRF                                   CH+
Sbjct: 30  VVGAQHPLKKIDCLVCSFCFRF---------------------------------KHCHE 56

Query: 133 MDSSDEEEGDRLCASASSKAKVPLPEGVVESLLNGQLILPFTEKFSLPSDVPCRGGCGEA 192
           M+SSDEEE  + C S S K KVPLPE VV+SL+NGQL+LPF+EK            C + 
Sbjct: 57  MESSDEEESTQQCTSGSPKTKVPLPEDVVKSLMNGQLVLPFSEK----------SPCCQL 106

Query: 193 YYCSESCEDAGWESSHSLLCTGDSNDPARLVALDKFF-----KHANDTNDIF-------- 239
           ++     E     + H     G  N P     L +       +H  +++++         
Sbjct: 107 FHALVDVEKLTIAACHVQRRIG--NPPILYSVLVRVLIQLVERHPLNSSNMLMFNFSEFH 164

Query: 240 -------------ILAAKAISSTILRYRKLKANFLEEQVTYDTSRVSNHCNFSLLLEAWR 286
                        IL   AISST+L+Y  LKA  LE+Q+ + TS VSNHCN S+LLEAW+
Sbjct: 165 VYRMPLEECTCMCILFMHAISSTMLKYHNLKAVSLEKQMKHHTSYVSNHCNLSILLEAWK 224

Query: 287 PISMGHKKR 295
           PI MGHK+R
Sbjct: 225 PILMGHKRR 233


>Glyma13g09120.1 
          Length = 248

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 121/249 (48%), Gaps = 71/249 (28%)

Query: 73  LVGAQHSSNQIDCFVCSYCFRFIGSIEHQIGRRLLFQSQASESHDCDVGNFSGSLDACHK 132
           +VGAQH   +IDC VCS+CFRF                                   CH+
Sbjct: 30  VVGAQHPLKKIDCLVCSFCFRF---------------------------------KHCHE 56

Query: 133 MDSSDEEEGDRLCASASSKAKVPLPEGVVESLLNGQLILPFTEKFSLPSDVPCRGGCGEA 192
           M+SSDEEE  + C S S K KVPLPE  V+SL+NGQL+LPF+EK       PCR    + 
Sbjct: 57  MESSDEEESTQQCTSGSPKTKVPLPEDAVKSLMNGQLVLPFSEK------SPCR----QL 106

Query: 193 YYCSESCEDAGWESSHSLLCTGDSNDPARLVALDKFF-----KHANDTNDIF-------- 239
           ++     E     + H     G  N P     L +       +H  +++++         
Sbjct: 107 FHALVDVEKLTIAACHVQRRIG--NPPILYSVLVRVLIQLVERHPLNSSNMLMFNFSEFH 164

Query: 240 -------------ILAAKAISSTILRYRKLKANFLEEQVTYDTSRVSNHCNFSLLLEAWR 286
                        IL   AISST+L+Y  LKA  LE+Q+ + TS VSNHCN S+LLEAW+
Sbjct: 165 VYRILLEECTCMCILFMHAISSTMLKYHNLKAVSLEKQMKHHTSCVSNHCNLSILLEAWK 224

Query: 287 PISMGHKKR 295
           PI MGHK+R
Sbjct: 225 PILMGHKRR 233


>Glyma19g04810.1 
          Length = 598

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 30/37 (81%), Gaps = 1/37 (2%)

Query: 81  NQIDCFVCSYCFRFIGSIEHQIGRRLLFQS-QASESH 116
           +QIDC VCS CFRF+GSIE +IGRRL  Q  +A+ESH
Sbjct: 12  SQIDCLVCSLCFRFVGSIELEIGRRLYMQQLRANESH 48