Miyakogusa Predicted Gene

Lj3g3v1309440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1309440.1 tr|B2J5B3|B2J5B3_NOSP7 Peptidase S16, lon domain
protein OS=Nostoc punctiforme (strain ATCC 29133 / ,48.11,2e-19,PUA
domain-like,PUA-like domain; LON,Peptidase S16, lon N-terminal;
seg,NULL; RING FINGER PROTEIN 12,CUFF.42440.1
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g112420.1 | ATP-dependent protease LA (lon) domain protein...   214   3e-56
Medtr3g037230.1 | zinc finger, C3HC4 type (RING finger) protein ...    52   1e-07
Medtr3g037230.2 | zinc finger, C3HC4 type (RING finger) protein ...    52   3e-07
Medtr3g037230.3 | zinc finger, C3HC4 type (RING finger) protein ...    52   3e-07

>Medtr3g112420.1 | ATP-dependent protease LA (lon) domain protein |
           HC | chr3:52675931-52677387 | 20130731
          Length = 294

 Score =  214 bits (544), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 99/114 (86%), Positives = 108/114 (94%)

Query: 1   MMYTLLHTDLRFGVIYTDAVTGTAEVGCVGEVIKHERLVDDRFFLICKGQERFRVTKLVR 60
           MM+TLL TDLRFGVIY DAVTG +EVGCVGEVIKHERLVDDRFFLICKGQERFR+TK+VR
Sbjct: 107 MMHTLLQTDLRFGVIYNDAVTGLSEVGCVGEVIKHERLVDDRFFLICKGQERFRITKVVR 166

Query: 61  TKPYLVAQVTWLEDRPSPDADLDLDGLASEVETYMKDVIQLSNRLGGKPEKEVG 114
           TKPYLVA+V WLEDRPSP AD+D+DGLA+EVETYMKDVI+LSNRLGGK EKEVG
Sbjct: 167 TKPYLVARVAWLEDRPSPSADVDVDGLANEVETYMKDVIRLSNRLGGKAEKEVG 220


>Medtr3g037230.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr3:13637290-13627006 | 20130731
          Length = 480

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 1   MMYTLLHTDLRFGVIYTDAVTGT-AEVGCVGEVIKHERLVDDRFFLICKGQERFRVTKLV 59
           M+  ++  + R G++  DA TG+ AE GC  E+ + E L D RF++  +G+ RFR  +  
Sbjct: 300 MVRRIMEGNHRMGMVIIDASTGSLAEFGCEVEITECEPLPDGRFYIEIEGRRRFRNLRSW 359

Query: 60  RTKPYLVAQVTWLEDRPSPDA 80
               Y VA+V W++D   P+ 
Sbjct: 360 DQDGYRVAEVEWIQDIMPPEG 380


>Medtr3g037230.2 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr3:13636031-13627006 | 20130731
          Length = 433

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 1   MMYTLLHTDLRFGVIYTDAVTGT-AEVGCVGEVIKHERLVDDRFFLICKGQERFRVTKLV 59
           M+  ++  + R G++  DA TG+ AE GC  E+ + E L D RF++  +G+ RFR  +  
Sbjct: 253 MVRRIMEGNHRMGMVIIDASTGSLAEFGCEVEITECEPLPDGRFYIEIEGRRRFRNLRSW 312

Query: 60  RTKPYLVAQVTWLEDRPSPD 79
               Y VA+V W++D   P+
Sbjct: 313 DQDGYRVAEVEWIQDIMPPE 332


>Medtr3g037230.3 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr3:13635998-13627006 | 20130731
          Length = 433

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 1   MMYTLLHTDLRFGVIYTDAVTGT-AEVGCVGEVIKHERLVDDRFFLICKGQERFRVTKLV 59
           M+  ++  + R G++  DA TG+ AE GC  E+ + E L D RF++  +G+ RFR  +  
Sbjct: 253 MVRRIMEGNHRMGMVIIDASTGSLAEFGCEVEITECEPLPDGRFYIEIEGRRRFRNLRSW 312

Query: 60  RTKPYLVAQVTWLEDRPSPD 79
               Y VA+V W++D   P+
Sbjct: 313 DQDGYRVAEVEWIQDIMPPE 332