Miyakogusa Predicted Gene

Lj3g3v1309440.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1309440.1 tr|B2J5B3|B2J5B3_NOSP7 Peptidase S16, lon domain
protein OS=Nostoc punctiforme (strain ATCC 29133 / ,48.11,2e-19,PUA
domain-like,PUA-like domain; LON,Peptidase S16, lon N-terminal;
seg,NULL; RING FINGER PROTEIN 12,CUFF.42440.1
         (469 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72154 similar to UniRef100_A7NT45 Cluster: Chromosome...   270   7e-72

>gnl|LJGI|TC72154 similar to UniRef100_A7NT45 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 646

 Score =  270 bits (136), Expect = 7e-72
 Identities = 139/140 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgtacacactcctccacaccgatctccgcttcggcgtcatctacaccgacgccgtc 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atgatgcacacactcctccacaccgatctccgcttcggcgtcatctacaccgacgccgtc 566

                                                                       
Query: 61  accggcaccgccgaggtcggctgcgtcggcgaggtcatcaagcacgagcgtctcgtcgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 accggcaccgccgaggtcggctgcgtcggcgaggtcatcaagcacgagcgtctcgtcgat 626

                               
Query: 121 gaccgattcttcctgatctg 140
           ||||||||||||||||||||
Sbjct: 627 gaccgattcttcctgatctg 646