Miyakogusa Predicted Gene
- Lj3g3v1182360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1182360.1 Non Chatacterized Hit- tr|K3ZJI9|K3ZJI9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026742,36.45,1e-18,DUF3049,Protein of unknown function DUF3049;
seg,NULL,CUFF.42336.1
(240 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22390.1 | Symbols: | Protein of unknown function (DUF3049) ... 74 8e-14
AT1G54740.1 | Symbols: | Protein of unknown function (DUF3049) ... 65 4e-11
AT5G19260.1 | Symbols: | Protein of unknown function (DUF3049) ... 50 1e-06
AT1G22110.1 | Symbols: | structural constituent of ribosome | c... 49 2e-06
>AT5G22390.1 | Symbols: | Protein of unknown function (DUF3049) |
chr5:7418383-7418991 REVERSE LENGTH=202
Length = 202
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 92 CTEGLGSESSDDVVEDLKSGMSEHWRIDMEKEGVKKKHLSSYGGECRRS--REYPPPISC 149
CTEGLGSES + ++ +G + ++E +G E RR +EYPP ++
Sbjct: 82 CTEGLGSESYYGLEDEKVNGDGDGDDDEIEVKGKDNGSNDEEEWEPRRKERKEYPPAMTR 141
Query: 150 LGRTGKPCVVYRSYRSNGRFVLEEIRIPTKEFLHASREDGRLKLHFVQP 198
+ +++YR GR VLEE+RIP +EFL ASREDGRL+L VQP
Sbjct: 142 MS--------FKTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQP 182
>AT1G54740.1 | Symbols: | Protein of unknown function (DUF3049) |
chr1:20430839-20431738 FORWARD LENGTH=299
Length = 299
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 92 CTEGLGSESSDDVVED--LKSGMSEHWRIDMEKEGVKKKHLSSYGGECRRSREYPPPISC 149
CTE LG ES D + D +++ M+ H ++ E+ K++ + +++PPP+S
Sbjct: 39 CTEYLGFESYDMRMSDNEVENKMTCHAEVETERVEAKRRKTKENVVVQAQKKQFPPPLSS 98
Query: 150 LGRTGKPCVVYRSYRSNGRFVLEEIRIPTKEFLHASREDGRLKLHFV 196
L G+ R R +GR L ++ + E H SR DGRL+LHFV
Sbjct: 99 LNSRGQRYFYLRPVRKDGRLELTQVMVDRPEIFHVSRVDGRLRLHFV 145
>AT5G19260.1 | Symbols: | Protein of unknown function (DUF3049) |
chr5:6479494-6480360 REVERSE LENGTH=288
Length = 288
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 92 CTEGLGSESSDDVVEDLKSGMSEHWRIDMEKEGVKKKHLSSYGGECR--RSR-------E 142
CTE LGSES DV + + E + +D V+ K+L E R +SR +
Sbjct: 116 CTENLGSESGSDVTD-----IDELFSLD-----VQTKNLGETTTETRTLKSRKRSVSPSD 165
Query: 143 YPPPISCLGRTGKPCVVYRSYRSNGRFVLEEIRIPTKE-FLHASREDGRLKLHFVQ 197
PPP++ + G C+ R +R NGR V+ P + A R +GRL+L ++
Sbjct: 166 LPPPLTTM--RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILK 219
>AT1G22110.1 | Symbols: | structural constituent of ribosome |
chr1:7801625-7802473 REVERSE LENGTH=282
Length = 282
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 143 YPPPISCLGRTGK-----PCVVYRSYRSNGRFVLEEIRIPTKEFLHASREDGRLKLHFV 196
+PPPI L +TG P V+ R S+GR +L E ++ E+ A+R +GRL LH V
Sbjct: 102 FPPPIPLLAQTGNLLPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLV 160