Miyakogusa Predicted Gene

Lj3g3v1182360.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1182360.1 Non Chatacterized Hit- tr|K3ZJI9|K3ZJI9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026742,36.45,1e-18,DUF3049,Protein of unknown function DUF3049;
seg,NULL,CUFF.42336.1
         (724 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP031636 homologue to UniRef100_A7QF99 Cluster: Chromos...   357   6e-98

>gnl|LJGI|BP031636 homologue to UniRef100_A7QF99 Cluster: Chromosome undetermined
           scaffold_87, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_87, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (6%)
          Length = 478

 Score =  357 bits (180), Expect = 6e-98
 Identities = 180/180 (100%)
 Strand = Plus / Minus

                                                                       
Query: 545 tacatgctagtagagaggatggaaggctcaagttgcattttgttcagcctgatgatgatg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tacatgctagtagagaggatggaaggctcaagttgcattttgttcagcctgatgatgatg 419

                                                                       
Query: 605 aatttctagaagaagatgatggtgatttagaaagtactataaatgatgaagaagaaagca 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aatttctagaagaagatgatggtgatttagaaagtactataaatgatgaagaagaaagca 359

                                                                       
Query: 665 ttggaaaagaaaatgatatttgtgtaacacatcatgtaaatgaagaaaaaatagaatgat 724
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttggaaaagaaaatgatatttgtgtaacacatcatgtaaatgaagaaaaaatagaatgat 299