Miyakogusa Predicted Gene
- Lj3g3v1113460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1113460.1 Non Chatacterized Hit- tr|K3Y944|K3Y944_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010736,32.66,8e-19,HLH,Helix-loop-helix domain; MYC,NULL;
seg,NULL; no description,Helix-loop-helix domain;
coiled-coil,CUFF.42256.1
(975 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57198 similar to UniRef100_A7PQP7 Cluster: Chromosome... 1933 0.0
gnl|LJGI|GO011352 similar to UniRef100_A7PQP7 Cluster: Chromosom... 260 1e-68
>gnl|LJGI|TC57198 similar to UniRef100_A7PQP7 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 1365
Score = 1933 bits (975), Expect = 0.0
Identities = 975/975 (100%)
Strand = Plus / Plus
Query: 1 atggatgcaatggatgctccccaggacacacttgggtacatcaataacgattttgagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 atggatgcaatggatgctccccaggacacacttgggtacatcaataacgattttgagctg 76
Query: 61 catgacttcattgacgatccaaacttcgatcagtttatcaatttgattcgaggggagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 catgacttcattgacgatccaaacttcgatcagtttatcaatttgattcgaggggagaat 136
Query: 121 gaagatgccatatgcaacttcggttctgattttatcaacgattgtttcattgataataat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gaagatgccatatgcaacttcggttctgattttatcaacgattgtttcattgataataat 196
Query: 181 cagcttcttccaaatcatgatggaatcccgtttggtccgagcaataatagtaattttgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cagcttcttccaaatcatgatggaatcccgtttggtccgagcaataatagtaattttgtg 256
Query: 241 aatgtctatgatccaataagcttctcttgttttgatggggtggtgaagggagaaggagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aatgtctatgatccaataagcttctcttgttttgatggggtggtgaagggagaaggagaa 316
Query: 301 gagaatgatggaggagattcttccactacgacaaccaccaccaccaattctgggagtggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gagaatgatggaggagattcttccactacgacaaccaccaccaccaattctgggagtggg 376
Query: 361 agtgctgatgatgatgcccaaccgaaggcgaaaagcgataggtccaagactctcatttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agtgctgatgatgatgcccaaccgaaggcgaaaagcgataggtccaagactctcatttgt 436
Query: 421 gagaggagaaggagaggtagaatgaaggagaagctttatgctttgcgttctttggttcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gagaggagaaggagaggtagaatgaaggagaagctttatgctttgcgttctttggttcca 496
Query: 481 aacataactaagatggataaggcctctataattggagatgcagtttcatacgtgcatgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aacataactaagatggataaggcctctataattggagatgcagtttcatacgtgcatgac 556
Query: 541 cttcaagcacaagcaaagaagctgaaggctgaggttgcaggacttgaagcatccttatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cttcaagcacaagcaaagaagctgaaggctgaggttgcaggacttgaagcatccttatta 616
Query: 601 gtgtctgaaaattaccaaggatcaattaacaaccgcattaagaatgttcaagtcaccaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtgtctgaaaattaccaaggatcaattaacaaccgcattaagaatgttcaagtcaccaac 676
Query: 661 aacaacaatccaatcagcaagaaaatcatgcaggtggacatgtttcaagtggaggagaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aacaacaatccaatcagcaagaaaatcatgcaggtggacatgtttcaagtggaggagaga 736
Query: 721 gggtattatgtgaaaatagtgtgcaataaaggagcaggggtggctgtttctctgtacaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gggtattatgtgaaaatagtgtgcaataaaggagcaggggtggctgtttctctgtacaga 796
Query: 781 gctattgagtctcttgcaggattcaatgttcgcaatacaaacttagccacagtttgtgac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gctattgagtctcttgcaggattcaatgttcgcaatacaaacttagccacagtttgtgac 856
Query: 841 agttttgtgcttacatttacaatgaatgtgaaaggttctgagccagaaattaaccttcct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 agttttgtgcttacatttacaatgaatgtgaaaggttctgagccagaaattaaccttcct 916
Query: 901 aatttgaagctgtgggtgaccggagctcttctgaaccaaggctttgaattcatggcatcc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 aatttgaagctgtgggtgaccggagctcttctgaaccaaggctttgaattcatggcatcc 976
Query: 961 tttgatgtttgaatc 975
|||||||||||||||
Sbjct: 977 tttgatgtttgaatc 991
>gnl|LJGI|GO011352 similar to UniRef100_A7PQP7 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 733
Score = 260 bits (131), Expect = 1e-68
Identities = 200/223 (89%)
Strand = Plus / Plus
Query: 397 gataggtccaagactctcatttgtgagaggagaaggagaggtagaatgaaggagaagctt 456
||||||||||||||| | || | ||||||||| |||||||| |||||||||||||||||
Sbjct: 408 gataggtccaagactttgatctctgagaggaggaggagaggacgaatgaaggagaagctt 467
Query: 457 tatgctttgcgttctttggttccaaacataactaagatggataaggcctctataattgga 516
||||| |||||| | |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 468 tatgcattgcgtgccttggttcccaacataactaagatggataaggcctctatcattgga 527
Query: 517 gatgcagtttcatacgtgcatgaccttcaagcacaagcaaagaagctgaaggctgaggtt 576
||||| |||||||| ||| |||| |||||||||||||| |||||||| ||| ||||||||
Sbjct: 528 gatgctgtttcatatgtgtatgatcttcaagcacaagccaagaagctaaagactgaggtt 587
Query: 577 gcaggacttgaagcatccttattagtgtctgaaaattaccaag 619
|||||||||||||||||||||||||| || ||||||| ||||
Sbjct: 588 gcaggacttgaagcatccttattagtctcccaaaattatcaag 630
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 88 gatcagtttatcaatttgattcgaggggagaatgaag 124
||||||||||||||| ||||||| |||||||||||||
Sbjct: 96 gatcagtttatcaatatgattcgtggggagaatgaag 132