Miyakogusa Predicted Gene

Lj3g3v0977780.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0977780.2 Non Chatacterized Hit- tr|D8S9B1|D8S9B1_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,75.38,2e-19,Endosulfine,Endosulphine; seg,NULL,CUFF.42061.2
         (117 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64130.1 | Symbols:  | cAMP-regulated phosphoprotein 19-relat...   102   4e-23
AT5G64130.3 | Symbols:  | cAMP-regulated phosphoprotein 19-relat...    89   4e-19
AT1G69510.2 | Symbols:  | cAMP-regulated phosphoprotein 19-relat...    69   8e-13
AT1G69510.3 | Symbols:  | cAMP-regulated phosphoprotein 19-relat...    69   8e-13
AT1G69510.1 | Symbols:  | cAMP-regulated phosphoprotein 19-relat...    69   8e-13
AT4G16146.1 | Symbols:  | cAMP-regulated phosphoprotein 19-relat...    47   2e-06

>AT5G64130.1 | Symbols:  | cAMP-regulated phosphoprotein 19-related
           protein | chr5:25664547-25665339 REVERSE LENGTH=115
          Length = 115

 Score =  102 bits (255), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/118 (50%), Positives = 68/118 (57%), Gaps = 5/118 (4%)

Query: 1   MSNIEDNKELGQMEVDASAGSTNMPSPQXXXXXXXXXXXXXXXXXXXLISKDHERAYFDS 60
           MS+ ED KE G +  +A     +MPS Q                   LISKDHERAYFDS
Sbjct: 1   MSSAEDVKEQGNLTNEAE---KSMPSSQQEEAVVKKKYGGLMPKKPPLISKDHERAYFDS 57

Query: 61  ADWALXXXXXXXXXXXLEALRPKLQPTQQQTRYRKSPYAPS--GEEGGSVPSEDATSN 116
           ADWAL           LEALRPKLQPTQQQTRYRKSP APS  GE+GG+  +E  + N
Sbjct: 58  ADWALGKQGVAKPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDGGAAQAEGGSGN 115


>AT5G64130.3 | Symbols:  | cAMP-regulated phosphoprotein 19-related
           protein | chr5:25664547-25665339 REVERSE LENGTH=140
          Length = 140

 Score = 89.4 bits (220), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 2/71 (2%)

Query: 48  LISKDHERAYFDSADWALXXXXXXXXXXXLEALRPKLQPTQQQTRYRKSPYAPS--GEEG 105
           + ++DHERAYFDSADWAL           LEALRPKLQPTQQQTRYRKSP APS  GE+G
Sbjct: 70  VYNQDHERAYFDSADWALGKQGVAKPKGPLEALRPKLQPTQQQTRYRKSPCAPSEGGEDG 129

Query: 106 GSVPSEDATSN 116
           G+  +E  + N
Sbjct: 130 GAAQAEGGSGN 140


>AT1G69510.2 | Symbols:  | cAMP-regulated phosphoprotein 19-related
           protein | chr1:26126779-26127725 FORWARD LENGTH=137
          Length = 137

 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 48  LISKDHERAYFDSADWALXXXXXXXXXXXLEALRPKLQPT-QQQTRYRKSPYAPSGE 103
           LISKDHERA+FDSADWAL           LEALRPKLQPT QQQ R R+  Y+ SGE
Sbjct: 44  LISKDHERAFFDSADWALGKQKGQKPKGPLEALRPKLQPTPQQQPRARRMAYS-SGE 99


>AT1G69510.3 | Symbols:  | cAMP-regulated phosphoprotein 19-related
           protein | chr1:26126779-26127725 FORWARD LENGTH=137
          Length = 137

 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 48  LISKDHERAYFDSADWALXXXXXXXXXXXLEALRPKLQPT-QQQTRYRKSPYAPSGE 103
           LISKDHERA+FDSADWAL           LEALRPKLQPT QQQ R R+  Y+ SGE
Sbjct: 44  LISKDHERAFFDSADWALGKQKGQKPKGPLEALRPKLQPTPQQQPRARRMAYS-SGE 99


>AT1G69510.1 | Symbols:  | cAMP-regulated phosphoprotein 19-related
           protein | chr1:26126779-26127725 FORWARD LENGTH=137
          Length = 137

 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 48  LISKDHERAYFDSADWALXXXXXXXXXXXLEALRPKLQPT-QQQTRYRKSPYAPSGE 103
           LISKDHERA+FDSADWAL           LEALRPKLQPT QQQ R R+  Y+ SGE
Sbjct: 44  LISKDHERAFFDSADWALGKQKGQKPKGPLEALRPKLQPTPQQQPRARRMAYS-SGE 99


>AT4G16146.1 | Symbols:  | cAMP-regulated phosphoprotein 19-related
           protein | chr4:9142663-9144356 REVERSE LENGTH=102
          Length = 102

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 48  LISKDHERAYFDSADWALXXXXXX---XXXXXLEALRPKLQPTQQQTRYRKSPYAPSGEE 104
           LISKD +RA+FDSADWAL              +E LRPKLQ T ++    + P   +G E
Sbjct: 36  LISKDSKRAFFDSADWALLKQEASIDQRTIAAIEKLRPKLQRTPRKQLSPRRPTCATGNE 95