Miyakogusa Predicted Gene

Lj3g3v0840540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0840540.1 tr|G7KTL5|G7KTL5_MEDTR CCP-like protein
OS=Medicago truncatula GN=MTR_7g092270 PE=4 SV=1,31.03,1e-18,
,CUFF.41579.1
         (354 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G52110.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   220   1e-57
AT3G52110.1 | Symbols:  | unknown protein; Has 191 Blast hits to...   213   2e-55

>AT3G52110.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 20 plant
           structures; EXPRESSED DURING: 11 growth stages. |
           chr3:19323925-19325632 REVERSE LENGTH=334
          Length = 334

 Score =  220 bits (561), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/376 (41%), Positives = 200/376 (53%), Gaps = 64/376 (17%)

Query: 1   MEPAKIDWKRVEWNFVEDELYEHINAPKWVDFLSPDH--DKDDEAWFCKPDCKHPKTAED 58
           MEPA IDWKR++  FVED  YEHI APKW DFL+P H    DD+AWFCKP+C HPK  ED
Sbjct: 1   MEPAHIDWKRIDSRFVEDVFYEHIRAPKWFDFLAPTHFDSIDDDAWFCKPECNHPKRPED 60

Query: 59  FLRXXXXXXXXXXXAYGLENSPFGDQNRRDGRIKRRVPALSSASPPDDNFRFNLDSENQD 118
           F             +    N    +QN+R     RR  ALS ++P       N +SENQ+
Sbjct: 61  FF---STPTSSKHPSLRDTNETLTEQNQR-----RRGYALSPSTPN------NQESENQN 106

Query: 119 PNMCTPSIQPTKTKTMKAAIKSSEEKRKLFDDAIEDSKVPPLRSVLSTKNLFAPRPILNH 178
           PN+ TP     + K+ +AAIKS+  K+        + +VP L+S  S +NLF+ R I  H
Sbjct: 107 PNLATPP--SYQAKSWRAAIKSTSVKKM-------NKEVPRLKSTQSARNLFSGRDIFGH 157

Query: 179 ITEFYNELKKLTLRAREREDAENLSTTGSESVVQEKTPLCPFQPLGKSDIR-EKERKPLV 237
           I++F  ELK+L  R  ERED     T  SE     +      QP    D+  +KERKPL+
Sbjct: 158 ISDFCYELKRLATRVTERED-----TGKSEVKESHQVGEIVNQPYSVHDLELKKERKPLL 212

Query: 238 EVKQ------------------QRKKRPDEAENRPITLDLECIKNKREEN-LQQIRVNPP 278
           EV +                  +RKKR D+AEN P+ L LE IKNK  E  LQQIR NPP
Sbjct: 213 EVSKDKLPESTDVKGSTFKENRRRKKRMDDAENIPVPLKLETIKNKGHERFLQQIRTNPP 272

Query: 279 SPQCFSAAHGLNKTTPSTTLKSRLMEKGILKEVEPNKEIAKESSPSYNCRSIAVIDERET 338
           SPQCFS     N+T     L+++  E    KE E  +E  ++S  S             T
Sbjct: 273 SPQCFSE----NRTATLKPLRTKPTEVLKRKEDEAEEEKNRKSGESKEA----------T 318

Query: 339 KTLDMFWFLKPCTLSS 354
           + LD+ WFLKPCTL++
Sbjct: 319 RGLDVLWFLKPCTLAN 334


>AT3G52110.1 | Symbols:  | unknown protein; Has 191 Blast hits to
           174 proteins in 54 species: Archae - 0; Bacteria - 7;
           Metazoa - 45; Fungi - 7; Plants - 40; Viruses - 0; Other
           Eukaryotes - 92 (source: NCBI BLink). |
           chr3:19323925-19325632 REVERSE LENGTH=362
          Length = 362

 Score =  213 bits (542), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/404 (38%), Positives = 203/404 (50%), Gaps = 92/404 (22%)

Query: 1   MEPAKIDWKRVEWNFVEDELYEHINAPKWVDFLSPDH--DKDDEAWFCKPDCKHPKTAED 58
           MEPA IDWKR++  FVED  YEHI APKW DFL+P H    DD+AWFCKP+C HPK  ED
Sbjct: 1   MEPAHIDWKRIDSRFVEDVFYEHIRAPKWFDFLAPTHFDSIDDDAWFCKPECNHPKRPED 60

Query: 59  FLRXXXXXXXXXXXAYGLENSPFGDQNRRDGRIKRRVPALSSASPPDDNFRFNLDSENQD 118
           F             +    N    +QN+R     RR  ALS ++P       N +SENQ+
Sbjct: 61  FF---STPTSSKHPSLRDTNETLTEQNQR-----RRGYALSPSTPN------NQESENQN 106

Query: 119 PNMCTPSIQPTKTKTMKAAIKSSEEKRKLFDDAIEDSKVPPLRSVLSTKNLFAPRPILNH 178
           PN+ TP     + K+ +AAIKS+  K+        + +VP L+S  S +NLF+ R I  H
Sbjct: 107 PNLATPP--SYQAKSWRAAIKSTSVKKM-------NKEVPRLKSTQSARNLFSGRDIFGH 157

Query: 179 ITEFYNELKKLTLRAREREDAENLSTTGSESVVQEKTPLCPFQPLGKSDIR-EKERKPLV 237
           I++F  ELK+L  R  ERED     T  SE     +      QP    D+  +KERKPL+
Sbjct: 158 ISDFCYELKRLATRVTERED-----TGKSEVKESHQVGEIVNQPYSVHDLELKKERKPLL 212

Query: 238 EVKQ------------------QRKKRPDEAENRPITLDLECIKNKREEN---------- 269
           EV +                  +RKKR D+AEN P++L++E +KNK EE           
Sbjct: 213 EVSKDKLPESTDVKGSTFKENRRRKKRVDDAENIPVSLNVETVKNKGEEGRRKKRMDDAE 272

Query: 270 -------------------LQQIRVNPPSPQCFSAAHGLNKTTPSTTLKSRLMEKGILKE 310
                              LQQIR NPPSPQCFS     N+T     L+++  E    KE
Sbjct: 273 NIPVPLKLETIKNKGHERFLQQIRTNPPSPQCFSE----NRTATLKPLRTKPTEVLKRKE 328

Query: 311 VEPNKEIAKESSPSYNCRSIAVIDERETKTLDMFWFLKPCTLSS 354
            E  +E  ++S  S             T+ LD+ WFLKPCTL++
Sbjct: 329 DEAEEEKNRKSGESKEA----------TRGLDVLWFLKPCTLAN 362