Miyakogusa Predicted Gene
- Lj3g3v0730080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0730080.1 tr|B9HZI1|B9HZI1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_568170 PE=4
SV=1,31.08,5e-19,AvrRpt-cleavage,Pathogenic type III effector
avirulence factor Avr cleavage site,CUFF.41225.1
(753 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76131 similar to UniRef100_A7QZU4 Cluster: Chromosome... 1493 0.0
gnl|LJGI|TC65934 similar to UniRef100_A7QZU4 Cluster: Chromosome... 743 0.0
>gnl|LJGI|TC76131 similar to UniRef100_A7QZU4 Cluster: Chromosome undetermined
scaffold_287, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_287,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (53%)
Length = 1211
Score = 1493 bits (753), Expect = 0.0
Identities = 753/753 (100%)
Strand = Plus / Plus
Query: 1 atggcacaacgttctcatgtaccaaagtttggcaattgggatggtgaagataatgttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atggcacaacgttctcatgtaccaaagtttggcaattgggatggtgaagataatgttcct 204
Query: 61 tatacagcatattttgacaaggcccggaaagatcgaactggaacaaagatgataaaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tatacagcatattttgacaaggcccggaaagatcgaactggaacaaagatgataaaccca 264
Query: 121 aatgaccctgaggaaaattcagatttagttcttgataataacctccctccttccaaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatgaccctgaggaaaattcagatttagttcttgataataacctccctccttccaaatcc 324
Query: 181 aaacccggagtggattcagaggatccatctggaaagggatcagcgcgatcaacatatgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaacccggagtggattcagaggatccatctggaaagggatcagcgcgatcaacatatgag 384
Query: 241 tctcataggagcatggaagatggtgatccaaaacaattcgttgactctcccgctcgtcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctcataggagcatggaagatggtgatccaaaacaattcgttgactctcccgctcgtcag 444
Query: 301 gccaatgattccgcacctcgctatggaggccagggagtaggttctgctgataaccgtaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gccaatgattccgcacctcgctatggaggccagggagtaggttctgctgataaccgtaaa 504
Query: 361 agaccttcgagacaaagtactgggtctgagtacagcattgagcgttcaccccttcatcgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agaccttcgagacaaagtactgggtctgagtacagcattgagcgttcaccccttcatcgc 564
Query: 421 caagctaaaacccctggcagggacagcccctcatgggaaggaaagagttcctacgacagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caagctaaaacccctggcagggacagcccctcatgggaaggaaagagttcctacgacagc 624
Query: 481 aaccatggtacacccggaagatcccggttaagaccagttaatcgaggggatgaaacacct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaccatggtacacccggaagatcccggttaagaccagttaatcgaggggatgaaacacct 684
Query: 541 gagaaaggtgctgctgttccgaagtttggtgagtgggacgtgagtaaccctgcatcagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gagaaaggtgctgctgttccgaagtttggtgagtgggacgtgagtaaccctgcatcagct 744
Query: 601 gatggcttcactcatattttcaacaaagtgagggaggagagacaaggcggggctggaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gatggcttcactcatattttcaacaaagtgagggaggagagacaaggcggggctggaaat 804
Query: 661 gcgctgggcacacctgagagaccccatgtcatcaggagccaacctagtaatgataaagtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gcgctgggcacacctgagagaccccatgtcatcaggagccaacctagtaatgataaagtc 864
Query: 721 cagtgttgctgctttgggtttagcaagaaatga 753
|||||||||||||||||||||||||||||||||
Sbjct: 865 cagtgttgctgctttgggtttagcaagaaatga 897
>gnl|LJGI|TC65934 similar to UniRef100_A7QZU4 Cluster: Chromosome undetermined
scaffold_287, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_287,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (28%)
Length = 606
Score = 743 bits (375), Expect = 0.0
Identities = 375/375 (100%)
Strand = Plus / Plus
Query: 379 actgggtctgagtacagcattgagcgttcaccccttcatcgccaagctaaaacccctggc 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 actgggtctgagtacagcattgagcgttcaccccttcatcgccaagctaaaacccctggc 61
Query: 439 agggacagcccctcatgggaaggaaagagttcctacgacagcaaccatggtacacccgga 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 agggacagcccctcatgggaaggaaagagttcctacgacagcaaccatggtacacccgga 121
Query: 499 agatcccggttaagaccagttaatcgaggggatgaaacacctgagaaaggtgctgctgtt 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agatcccggttaagaccagttaatcgaggggatgaaacacctgagaaaggtgctgctgtt 181
Query: 559 ccgaagtttggtgagtgggacgtgagtaaccctgcatcagctgatggcttcactcatatt 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccgaagtttggtgagtgggacgtgagtaaccctgcatcagctgatggcttcactcatatt 241
Query: 619 ttcaacaaagtgagggaggagagacaaggcggggctggaaatgcgctgggcacacctgag 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttcaacaaagtgagggaggagagacaaggcggggctggaaatgcgctgggcacacctgag 301
Query: 679 agaccccatgtcatcaggagccaacctagtaatgataaagtccagtgttgctgctttggg 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agaccccatgtcatcaggagccaacctagtaatgataaagtccagtgttgctgctttggg 361
Query: 739 tttagcaagaaatga 753
|||||||||||||||
Sbjct: 362 tttagcaagaaatga 376