Miyakogusa Predicted Gene
- Lj3g3v0719980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0719980.1 tr|B9GQL6|B9GQL6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_756296 PE=4
SV=1,62.34,1e-17,DNA-binding domain in plant proteins such as,AP2/ERF
domain; seg,NULL; DNA-binding domain,DNA-bindin,CUFF.41213.1
(702 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66272 similar to UniRef100_Q56XP9 Cluster: Ethylene-r... 718 0.0
gnl|LJGI|TC69366 similar to UniRef100_Q56XP9 Cluster: Ethylene-r... 392 e-108
gnl|LJGI|TC78744 similar to UniRef100_A7R6R9 Cluster: Chromosome... 337 6e-92
>gnl|LJGI|TC66272 similar to UniRef100_Q56XP9 Cluster: Ethylene-responsive
transcription factor-like protein At4g13040; n=1;
Arabidopsis thaliana|Rep: Ethylene-responsive
transcription factor-like protein At4g13040 -
Arabidopsis thaliana (Mouse-ear cress), partial (24%)
Length = 764
Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Plus
Query: 1 atggtaagcttgaggaggcgcaggcttttgggtctatgctcaggagacaattcgtttgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atggtaagcttgaggaggcgcaggcttttgggtctatgctcaggagacaattcgtttgtc 462
Query: 61 actccgcttcctctatactgtgagaatctagctggtgatgaaaattcaagtcagcatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 actccgcttcctctatactgtgagaatctagctggtgatgaaaattcaagtcagcatggt 522
Query: 121 aaacctaagagacagagtgaacaagctgtactttcggatattgcaagcgtcctagacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aaacctaagagacagagtgaacaagctgtactttcggatattgcaagcgtcctagacagt 582
Query: 181 aataccattgtgaaagatgaatcaggatcatcaaatgcatctggttccagctcgtccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aataccattgtgaaagatgaatcaggatcatcaaatgcatctggttccagctcgtccaaa 642
Query: 241 gagcagcctagtcaacagagcatagagcctcctattaaacgcagaaagcggcattcaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gagcagcctagtcaacagagcatagagcctcctattaaacgcagaaagcggcattcaaga 702
Query: 301 aaacctatacacaatcaagaaccgtgcttaatgagaggggtctatttcaaaaatatgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 aaacctatacacaatcaagaaccgtgcttaatgagaggggtctatttcaaaaatatgaag 762
Query: 361 tg 362
||
Sbjct: 763 tg 764
>gnl|LJGI|TC69366 similar to UniRef100_Q56XP9 Cluster: Ethylene-responsive
transcription factor-like protein At4g13040; n=1;
Arabidopsis thaliana|Rep: Ethylene-responsive
transcription factor-like protein At4g13040 -
Arabidopsis thaliana (Mouse-ear cress), partial (57%)
Length = 1067
Score = 392 bits (198), Expect = e-108
Identities = 498/596 (83%), Gaps = 9/596 (1%)
Strand = Plus / Plus
Query: 1 atggtaagcttgaggaggcgcaggcttttgggtctatgctcaggagacaattcgtttgtc 60
||||||||||| || ||||||||||||||||| |||||||||||| || ||| ||||||
Sbjct: 141 atggtaagcttaagaaggcgcaggcttttgggactatgctcaggaagcagttcatttgtc 200
Query: 61 actccgcttcctctatactgtgagaatctagctggtgatgaaaattcaagtcagcatggt 120
||||| || ||||| || || ||||||||| ||||| ||||||||||| | ||| |
Sbjct: 201 actccactccctctgtattgcgagaatctaactggttctgaaaattcaaactggtatgct 260
Query: 121 aaacctaagagacagagtgaacaagctgtactttcggatattgcaagcgtcctagacagt 180
||||||||||| |||||| |||| ||||| || ||||||| |||| ||||||
Sbjct: 261 aaacctaagag------tgaacagcctgtgctttcagacgatgcaagcatcctggacagt 314
Query: 181 aataccattgtgaaagatgaatcaggatcatcaaatgcatctggttccagctcgtccaaa 240
|||||||||||| |||| ||| |||| ||||||||| |||||||| ||||| || |||
Sbjct: 315 aataccattgtgcaagaagaaccaggttcatcaaatatttctggttcaagctcatcgaaa 374
Query: 241 gagcagcctagtcaacagagcatag-ag--cctcctattaaacgcagaaagcggcattca 297
||||||| || ||||| | | || || |||||| ||||||| || ||||| ||| |
Sbjct: 375 gagcagcttatgcaacaaaccccagcaggacctcctgttaaacgtaggaagcgacataga 434
Query: 298 agaaaacctatacacaatcaagaaccgtgcttaatgagaggggtctatttcaaaaatatg 357
||||| | | ||||||||||| | |||||||||||||| ||||||||||||||||||
Sbjct: 435 agaaagaatttgcacaatcaagagacatgcttaatgagaggtgtctatttcaaaaatatg 494
Query: 358 aagtggcaggcagcaataaaagtggacaagaaacagatccatctagggactgttgcttcg 417
|| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 495 aaatggcaagcagcaataaaagtggacaagaaacagatccacctagggactgttgggtca 554
Query: 418 caggaagaagctgctcacttatatgacagggctgctttcatgtgtgggagagagcccaat 477
|| || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 555 caagaggaagctgctcatttatatgacagggctgctttcatgtgtgggagggagcccaat 614
Query: 478 tttgagctgcctgaagaagaaaaacgggaactgcgtaagttcaaatgggaggaattcttg 537
|||||||| || |||||||| || |||||| ||| || ||||||||||| |||||||||
Sbjct: 615 tttgagcttcccgaagaagagaagcgggaattgcacaaattcaaatgggatgaattcttg 674
Query: 538 gcaatgactcgacaggcaattaccagtaaaaaacacaagggaaggcatagtccagg 593
||| ||||||| |||||||| || ||||||| |||||| |||||| |||||||||
Sbjct: 675 gcagtgactcggcaggcaatcacacgtaaaaagcacaagagaaggcttagtccagg 730
>gnl|LJGI|TC78744 similar to UniRef100_A7R6R9 Cluster: Chromosome undetermined
scaffold_1399, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1399,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 447
Score = 337 bits (170), Expect = 6e-92
Identities = 176/178 (98%)
Strand = Plus / Plus
Query: 525 ggaggaattcttggcaatgactcgacaggcaattaccagtaaaaaacacaagggaaggca 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaggaattcttggcaatgactcgacaggcaattaccagtaaaaaacacaagggaaggca 60
Query: 585 tagtccaggaccgcgtaataggattgaagaaccttcattgcacataggtgattctaaaag 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagtccaggaccgcgtaataggattgaagaaccttcattgcacataggtgattctaaaag 120
Query: 645 taagcaagtagcgaatgatttctctggtagcggatatgcagagcaagaaactgcaatc 702
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 taagccagtagcgaatgatttctctggtagcggatatgcagagccagaaactgcaatc 178