Miyakogusa Predicted Gene

Lj3g3v0669040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0669040.1 Non Characterized Hit- tr|E0CSQ5|E0CSQ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,78.86,0,TRAPPC10,TRAPP II complex, TRAPPC10; Foie-gras_1,Foie gras
liver health family 1; SUBFAMILY NOT NAME,CUFF.41083.1
         (1255 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g080050.1 | trafficking protein particle complex subunit-l...  2295   0.0  
Medtr4g126280.1 | hypothetical protein | HC | chr4:52525597-5252...   145   4e-34

>Medtr2g080050.1 | trafficking protein particle complex subunit-like
            protein | HC | chr2:33782977-33796241 | 20130731
          Length = 1257

 Score = 2295 bits (5948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1101/1258 (87%), Positives = 1175/1258 (93%), Gaps = 4/1258 (0%)

Query: 1    MANFLAQFQTIKNSSDRLVISVEDVSDLWPTVKPAFEARLPFKKASLNNKTRNPVLVETL 60
            MANFLAQFQTIKNSSDRLVISVEDVSDLWPTVKPAFEARLPFK+ASLNNKTRNPVLV+ L
Sbjct: 1    MANFLAQFQTIKNSSDRLVISVEDVSDLWPTVKPAFEARLPFKRASLNNKTRNPVLVDKL 60

Query: 61   PAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDER 120
            PAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFK+ILKPRLKLIVQNDER
Sbjct: 61   PAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKSILKPRLKLIVQNDER 120

Query: 121  EWFIVFVSKAHPANDQASKMAKKVYAKLEVEFSSKKRERCCKYDMHFPEANFWEDLESKI 180
            EWFIVFVSKAHPANDQA+KMAKKVYAKLEVEFSS+KRERCCKYDMHFPEA+FWEDLESKI
Sbjct: 121  EWFIVFVSKAHPANDQANKMAKKVYAKLEVEFSSRKRERCCKYDMHFPEAHFWEDLESKI 180

Query: 181  TECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFIFEMGHLHEDALREY 240
             ECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAF+FEM HLHEDALREY
Sbjct: 181  MECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHEDALREY 240

Query: 241  DELELCYLETVNMSGKQRDFGGGERGDDQAAVLNPGNKALTQIVQEDSFREFEFRQYLFA 300
            DELELCYLETVNM+GKQR+FGG + GDDQAA++NPGNKALTQIVQEDSFREFEFRQYLFA
Sbjct: 241  DELELCYLETVNMTGKQRNFGGADHGDDQAAIINPGNKALTQIVQEDSFREFEFRQYLFA 300

Query: 301  CQSKLLFKLNRPIEVASRGYSFIISFSKSLALHERILPFCMREVWVITACLALVEATTSN 360
            CQSKLLFKLNRPIEVASRGYSFI+SFSKSLALHERILPFCMREVWVITAC+AL+EATTSN
Sbjct: 301  CQSKLLFKLNRPIEVASRGYSFILSFSKSLALHERILPFCMREVWVITACMALIEATTSN 360

Query: 361  YNDGLMVPDIEKEFFRLLGDLYSLGRVKFMRLAYLVGYGTEIERSPVNSASLSLLPWPKP 420
            Y+DGL+ PD+EKEFF LLGDLYSL RVKFMRLAYL+GYGT+IERSPVNSASLSLLPWPKP
Sbjct: 361  YSDGLVAPDVEKEFFCLLGDLYSLARVKFMRLAYLIGYGTDIERSPVNSASLSLLPWPKP 420

Query: 421  AVWPSVPADASSEVLDKEKLILQTTPRAKHFGIQRKPLPLEPTVLLREANRRRASLSAGN 480
            AVWPSVPADAS+EVL+KEKLILQTTPR KHFGIQRKPLPLEPTVLLREANRRRASLSAGN
Sbjct: 421  AVWPSVPADASAEVLEKEKLILQTTPRIKHFGIQRKPLPLEPTVLLREANRRRASLSAGN 480

Query: 481  VFEIFDSRQGPVEGSGFDASSRMSPQKVHASSMSRTNSSPGNFDGSIDRPMRLAEIYVAT 540
              E+FDSRQGP+EGSGFDAS +MSPQKV + SM RTNSSPGNFD SI RPMRLAEIY+A 
Sbjct: 481  ALEMFDSRQGPMEGSGFDASPKMSPQKVLSGSMPRTNSSPGNFDSSISRPMRLAEIYIAA 540

Query: 541  EHALKQTISNQXXXXXXXXXXXXXQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVAFK 600
            EHALKQTISN              +KYLELTKGAADNYH SWWKRHGVVLDGEIAAVAFK
Sbjct: 541  EHALKQTISNLEMLKSLSSSEEFEKKYLELTKGAADNYHNSWWKRHGVVLDGEIAAVAFK 600

Query: 601  RGHFDQAAKSYEKVCALYSGEGWQDLLAEVLPYLAECQKILDDQAGYLLSCVRLLSLDEE 660
             GHFDQAAKSYEKVCALYSGEGWQ+LLAEVLP LAECQKIL+DQAGYLLSCVRLLSL++ 
Sbjct: 601  HGHFDQAAKSYEKVCALYSGEGWQELLAEVLPILAECQKILNDQAGYLLSCVRLLSLEDG 660

Query: 661  LFSTKERQAFQSEVLRLAHSEMKNPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVWS 720
            LF TKERQAFQ+EV+RLAHSEMK+PVPLDVSSLITFSGNPGPPLELCD+DPGILSVTV S
Sbjct: 661  LFLTKERQAFQAEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDKDPGILSVTVCS 720

Query: 721  GFPDDITLDSISLTLMATNNADEGVKALKSSTAIVLQPGRNTITLDLPPHKPGSYVLGVL 780
            GFPDDITLDSISLTLMAT+NADEG KALKSSTAIVL PGRNTITLDLP  KPGSYVLGVL
Sbjct: 721  GFPDDITLDSISLTLMATSNADEGAKALKSSTAIVLHPGRNTITLDLPSQKPGSYVLGVL 780

Query: 781  TGQIGQLRFRSHSFSKIGPADSDDFMSYEKPAKPILKVFKPRALVDLEAAVSSALLINEH 840
            TGQIGQLRFRSH FSK+GP +SDD MSYEKPAKPILKV KPRALVDL+AAVSSALLINEH
Sbjct: 781  TGQIGQLRFRSHGFSKVGPTESDDVMSYEKPAKPILKVSKPRALVDLDAAVSSALLINEH 840

Query: 841  QWLGILVRPLNYSLRAAVLHIDTGPGLEIEKSHIIEMESCACVSQNDD---GQGGAQVDS 897
            QW+GILVRPLNYSL+AAVLHIDTGPGLEIE++HIIEMES A VS+NDD    + GAQ+DS
Sbjct: 841  QWVGILVRPLNYSLKAAVLHIDTGPGLEIEETHIIEMESYAGVSENDDVEVQKDGAQIDS 900

Query: 898  LNYEKRFERLTLDDGKVVFPNWASDTPSVLWVLIRAISDTLCXXXXXXXXXXESIVDGMR 957
            LN EK+FER  L+DGK+VFPNWASDTPS+LWVLIRAISDTL           ESIVDGMR
Sbjct: 901  LNSEKKFERSNLNDGKIVFPNWASDTPSILWVLIRAISDTLNRGSSSVTTRRESIVDGMR 960

Query: 958  TIALKLEFGAFHNQTFERTLAVHFTYPFYVRTRVTDKCNDGTLLLQVILHSEVKATLTVY 1017
            TIALKLEFGAFHNQ FERTLAVHFT+PFYVRTRVTDKCNDGTLLLQVILHSEVKA LT+Y
Sbjct: 961  TIALKLEFGAFHNQIFERTLAVHFTHPFYVRTRVTDKCNDGTLLLQVILHSEVKAVLTIY 1020

Query: 1018 DAWLDLQDGFIHTGQTDGRPNSSFFPLIISPTSKAGILFSICLGKTNAEEEATKQPESIL 1077
            DAW+DLQDGF+H+GQT+GRP SSFFPLIISPTSKAGILFSI L KTNA EEA KQPESIL
Sbjct: 1021 DAWIDLQDGFVHSGQTEGRPKSSFFPLIISPTSKAGILFSIFLDKTNA-EEAMKQPESIL 1079

Query: 1078 NIKYGISGDRTSGAHRPFLNESTGVDGVRQELIFKTAITLQRPVLDPCIAVGFLPLPSDG 1137
            NIKYGISGDRT GAH PF+NESTGVDG RQELIFK+ I LQRPVLDPC+AVGFLPLPSDG
Sbjct: 1080 NIKYGISGDRTIGAHPPFINESTGVDGARQELIFKSVIVLQRPVLDPCLAVGFLPLPSDG 1139

Query: 1138 LRVGQLVKMQWRVERLKYLDEKEVSQQSDEVLYEVNANSGNWMIAGRKRGHVSLSIKQGA 1197
            LRVGQLVKMQWRVERLK L+E+E+S+Q+DEVLYEVNANSGNWMIAGRKRGHVSLS  QGA
Sbjct: 1140 LRVGQLVKMQWRVERLKDLNEREISEQNDEVLYEVNANSGNWMIAGRKRGHVSLSKNQGA 1199

Query: 1198 RIIISVLCMPLVAGYVRPPLLGLPDVDEANIRCKPAGPHLICVLPPALSSSFCIPVDS 1255
            RIII+VLCMPLVAGYVRPPLLGLP+++EANIRCKP+GPHL+CVLPP LSSS+C+PV+S
Sbjct: 1200 RIIITVLCMPLVAGYVRPPLLGLPEIEEANIRCKPSGPHLVCVLPPTLSSSYCVPVNS 1257


>Medtr4g126280.1 | hypothetical protein | HC |
           chr4:52525597-52524396 | 20130731
          Length = 167

 Score =  145 bits (365), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/65 (92%), Positives = 63/65 (96%)

Query: 156 KRERCCKYDMHFPEANFWEDLESKITECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCN 215
           +R RCCKYDMHFPEA+FWEDLESKI ECIRNT+DRRVQFYEDEIRKLSEQRLMPVWNFCN
Sbjct: 66  RRLRCCKYDMHFPEAHFWEDLESKIMECIRNTVDRRVQFYEDEIRKLSEQRLMPVWNFCN 125

Query: 216 FFILK 220
           FFILK
Sbjct: 126 FFILK 130