Miyakogusa Predicted Gene

Lj3g3v0669040.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0669040.1 Non Chatacterized Hit- tr|E0CSQ5|E0CSQ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,78.86,0,TRAPPC10,TRAPP II complex, TRAPPC10; Foie-gras_1,Foie gras
liver health family 1; SUBFAMILY NOT NAME,CUFF.41083.1
         (3771 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66039 similar to UniRef100_Q9LSR1 Cluster: Genomic DN...  1257   0.0  
gnl|LJGI|TC71249 similar to UniRef100_A7P1H4 Cluster: Chromosome...   204   3e-51

>gnl|LJGI|TC66039 similar to UniRef100_Q9LSR1 Cluster: Genomic DNA, chromosome 5, BAC
           clone:F24B18; n=1; Arabidopsis thaliana|Rep: Genomic
           DNA, chromosome 5, BAC clone:F24B18 - Arabidopsis
           thaliana (Mouse-ear cress), partial (17%)
          Length = 852

 Score = 1257 bits (634), Expect = 0.0
 Identities = 648/655 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccaacttcctcgctcagttccaaaccattaagaactcctccgatcgcctcgtcatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atggccaacttcctcgctcagttccaaaccattaagaactcctccgatcgcctcgtcatt 257

                                                                       
Query: 61  tcagtggaggatgtgagtgacttgtggccaactgtaaagcctgctttcgaggcgcgattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tcagtggaggatgtgagtgacttgtggccaactgtaaagcctgctttcgaggcgcgattg 317

                                                                       
Query: 121 ccgtttaaaaaggcgagtttgaataacaagacgcggaaccctgtcttggtggagactttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ccgtttaaaaaggcgagtttgaataacaagacgcggaaccctgtcttggtggagactttg 377

                                                                       
Query: 181 ccggccgagttcatattaactactgattcgagactgcggagccggttccctcaggagcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccggccgagttcatattaactactgattcgagactgcggagccggttccctcaggagcag 437

                                                                       
Query: 241 ttgttgttctggtttcgagagccgtatgcaactgttgtgctggttacctgtgaggatctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttgttgttctggtttcgagagccgtatgcaactgttgtgctggttacctgtgaggatctc 497

                                                                       
Query: 301 gatgagttcaaaaccatccttaaaccacgcctgaaattaattgtccaaaatgatgaaagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gatgagttcaaaaccatccttaaaccacgcctgaaattaattgtccaaaatgatgaaagg 557

                                                                       
Query: 361 gaatggtttattgtatttgtatctaaagctcatccagctaatgatcaggcaagcaaaatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gaatggtttattgtatttgtatctaaagctcatccagctaatgatcaggcaagcaaaatg 617

                                                                       
Query: 421 gcaaagaaggtttatgctaaacttgaagtcgagtttagttccnnnnnnngagaaagatgc 480
           ||||||||||||||||||||||||||||||||||||||||||       |||||||||||
Sbjct: 618 gcaaagaaggtttatgctaaacttgaagtcgagtttagttccaaaaaaagagaaagatgc 677

                                                                       
Query: 481 tgcaaatatgatatgcatttccctgaagcgaatttttgggaggacctggaatcaaagata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tgcaaatatgatatgcatttccctgaagcgaatttttgggaggacctggaatcaaagata 737

                                                                       
Query: 541 accgaatgcattagaaatacattggataggcgtgtacagttttatgaggatgaaatacga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 accgaatgcattagaaatacattggataggcgtgtacagttttatgaggatgaaatacga 797

                                                                  
Query: 601 aagctcagtgaacagcgcctcatgccagtctggaacttctgtaattttttcatac 655
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 aagctcagtgaacagcgcctcatgccagtctggaacttctgtaattttttcatac 852


>gnl|LJGI|TC71249 similar to UniRef100_A7P1H4 Cluster: Chromosome chr19 scaffold_4,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_4, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (3%)
          Length = 546

 Score =  204 bits (103), Expect = 3e-51
 Identities = 106/107 (99%)
 Strand = Plus / Plus

                                                                        
Query: 3665 atgttgatgaggcaaatataagatgcaaacctgctgggccacatctgatttgtgttttgc 3724
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atgttgatgaggcaaatataagatgcaaacctgctgggccacatctgatttgtgttttgc 60

                                                           
Query: 3725 ctccagctctgagctcatccttctgcattccagttgattcatgaact 3771
            ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61   ctccagctctgagctcatccttctgcattcccgttgattcatgaact 107