Miyakogusa Predicted Gene

Lj3g3v0669000.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0669000.1 Non Chatacterized Hit- tr|Q8GYA5|Q8GYA5_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At3,64.79,4e-17,seg,NULL,CUFF.41078.1
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g34970.1                                                       122   7e-29
Glyma13g35600.1                                                       104   3e-23

>Glyma12g34970.1 
          Length = 112

 Score =  122 bits (307), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/106 (62%), Positives = 75/106 (70%), Gaps = 5/106 (4%)

Query: 2   QTKQFSELPPKASISGHKMGE----GHNGGYLPMSHRFRPACKCSNRPGSVRCARHGYVV 57
           QT++ S+LPPK S SGHKMG+     H+GGYL +  R RPAC CSNRPGSVRCARHGYVV
Sbjct: 8   QTEESSQLPPKVSFSGHKMGDLSDGQHHGGYLAVVPRSRPACTCSNRPGSVRCARHGYVV 67

Query: 58  PGERMKKRVASKEIXXXXXXXXXXXXXXXXXNFKPTPSRLSNMSMA 103
           PGE+ K+RVASKEI                 NF+PTPSRLSNMSMA
Sbjct: 68  PGEK-KRRVASKEILRRALTPPPKRLGLRWLNFRPTPSRLSNMSMA 112


>Glyma13g35600.1 
          Length = 112

 Score =  104 bits (259), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 57/106 (53%), Positives = 68/106 (64%), Gaps = 5/106 (4%)

Query: 2   QTKQFSELPPKASISGHKMGE----GHNGGYLPMSHRFRPACKCSNRPGSVRCARHGYVV 57
           QT++ S+L PK   SGH++G+     H G YL +  R RPAC CSN P SVRCARHGY+ 
Sbjct: 8   QTEESSQLSPKVPFSGHRVGDLSYGQHKGRYLAVVPRSRPACTCSNWPDSVRCARHGYME 67

Query: 58  PGERMKKRVASKEIXXXXXXXXXXXXXXXXXNFKPTPSRLSNMSMA 103
           PGE+ K+RVASKEI                 NF+PTPSRLSNMSMA
Sbjct: 68  PGEK-KRRVASKEILRRALTPPPKRLALRWLNFRPTPSRLSNMSMA 112