Miyakogusa Predicted Gene
- Lj3g3v0663840.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0663840.3 tr|B9N7G4|B9N7G4_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_273528
PE=4,48.11,3e-18,seg,NULL; COP1-INTERACTING
PROTEIN-RELATED,NULL,CUFF.42786.3
(409 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G27430.2 | Symbols: CIP7 | COP1-interacting protein 7 | chr4:... 370 e-103
AT4G27430.1 | Symbols: CIP7 | COP1-interacting protein 7 | chr4:... 370 e-103
AT1G61100.1 | Symbols: | disease resistance protein (TIR class)... 295 6e-80
AT1G61100.2 | Symbols: | disease resistance protein (TIR class)... 291 5e-79
AT5G43310.3 | Symbols: | COP1-interacting protein-related | chr... 230 1e-60
AT5G43310.4 | Symbols: | COP1-interacting protein-related | chr... 230 1e-60
AT5G43310.2 | Symbols: | COP1-interacting protein-related | chr... 230 2e-60
AT5G43310.1 | Symbols: | COP1-interacting protein-related | chr... 149 3e-36
AT3G14172.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 143 2e-34
AT3G14172.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 124 8e-29
AT1G17360.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 117 1e-26
AT1G72410.2 | Symbols: | COP1-interacting protein-related | chr... 104 1e-22
AT1G72410.1 | Symbols: | COP1-interacting protein-related | chr... 104 1e-22
>AT4G27430.2 | Symbols: CIP7 | COP1-interacting protein 7 |
chr4:13718817-13722736 FORWARD LENGTH=1058
Length = 1058
Score = 370 bits (950), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/340 (55%), Positives = 228/340 (67%), Gaps = 12/340 (3%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSI 60
M+P +RLD+ALFQLTPTRTRCDL+I +GG NE+LASGI +PF++HLKS DQISKGGYS+
Sbjct: 1 MDPRTRLDYALFQLTPTRTRCDLVIFSGGENEKLASGIFQPFVTHLKSVSDQISKGGYSV 60
Query: 61 TLHPPVAHAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAETE 120
TL P PWFTK TL RFVRFV+TPEVLER VT+EKEI QIEDSIQ++
Sbjct: 61 TLRPSSVGVPWFTKVTLQRFVRFVTTPEVLERSVTLEKEIEQIEDSIQANAAAIAGEAEG 120
Query: 121 GNVSSADGRIKRSTTSKLKDELSGTNQEGYEENSRVRLQRVLDNRKAMLCKEQAMAYARA 180
+ K + SK K E G + EENS+V LQRVL+NRKA LCKEQAMAYARA
Sbjct: 121 NELGGTWTSQKSTALSKTKGETDG---DTVEENSKVGLQRVLENRKAALCKEQAMAYARA 177
Query: 181 LVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKNEDKRWIDEIAAMQAFSHPEL 240
LV G+ + +DDL FADAFGASRLR+ACVNF++LCK+KNED+ W+D+I AMQAF PEL
Sbjct: 178 LVVGFELDYMDDLFSFADAFGASRLREACVNFVDLCKRKNEDRMWVDQITAMQAFPRPEL 237
Query: 241 PYLRTSGIILDGED-DPSNKLNGDGSISESTPSHASLDIGQGQTPSTDGRAQIPMSWQNH 299
++ SGI+L GE+ D N N S S S + GQ +GRAQ+ M W N
Sbjct: 238 TFMGDSGIVLAGEENDLLNATNVKHGNSMDASSQGSFETGQ------EGRAQMAMPWPNQ 291
Query: 300 HPQFIHNFQGHAFQQXXXXXXXXXXXXXAYYPGNVQWPPN 339
PQ++ NFQGH + Y+ GN+QWP N
Sbjct: 292 FPQYMQNFQGHGY--PPPYMFPGMQGQSPYFHGNMQWPVN 329
>AT4G27430.1 | Symbols: CIP7 | COP1-interacting protein 7 |
chr4:13718817-13722736 FORWARD LENGTH=1058
Length = 1058
Score = 370 bits (950), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/340 (55%), Positives = 228/340 (67%), Gaps = 12/340 (3%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSI 60
M+P +RLD+ALFQLTPTRTRCDL+I +GG NE+LASGI +PF++HLKS DQISKGGYS+
Sbjct: 1 MDPRTRLDYALFQLTPTRTRCDLVIFSGGENEKLASGIFQPFVTHLKSVSDQISKGGYSV 60
Query: 61 TLHPPVAHAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAETE 120
TL P PWFTK TL RFVRFV+TPEVLER VT+EKEI QIEDSIQ++
Sbjct: 61 TLRPSSVGVPWFTKVTLQRFVRFVTTPEVLERSVTLEKEIEQIEDSIQANAAAIAGEAEG 120
Query: 121 GNVSSADGRIKRSTTSKLKDELSGTNQEGYEENSRVRLQRVLDNRKAMLCKEQAMAYARA 180
+ K + SK K E G + EENS+V LQRVL+NRKA LCKEQAMAYARA
Sbjct: 121 NELGGTWTSQKSTALSKTKGETDG---DTVEENSKVGLQRVLENRKAALCKEQAMAYARA 177
Query: 181 LVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKNEDKRWIDEIAAMQAFSHPEL 240
LV G+ + +DDL FADAFGASRLR+ACVNF++LCK+KNED+ W+D+I AMQAF PEL
Sbjct: 178 LVVGFELDYMDDLFSFADAFGASRLREACVNFVDLCKRKNEDRMWVDQITAMQAFPRPEL 237
Query: 241 PYLRTSGIILDGED-DPSNKLNGDGSISESTPSHASLDIGQGQTPSTDGRAQIPMSWQNH 299
++ SGI+L GE+ D N N S S S + GQ +GRAQ+ M W N
Sbjct: 238 TFMGDSGIVLAGEENDLLNATNVKHGNSMDASSQGSFETGQ------EGRAQMAMPWPNQ 291
Query: 300 HPQFIHNFQGHAFQQXXXXXXXXXXXXXAYYPGNVQWPPN 339
PQ++ NFQGH + Y+ GN+QWP N
Sbjct: 292 FPQYMQNFQGHGY--PPPYMFPGMQGQSPYFHGNMQWPVN 329
>AT1G61100.1 | Symbols: | disease resistance protein (TIR class),
putative | chr1:22508831-22512122 REVERSE LENGTH=808
Length = 808
Score = 295 bits (754), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 156/317 (49%), Positives = 215/317 (67%), Gaps = 10/317 (3%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSI 60
M+ + LD ALFQLTPTRTR DL++ G E+LASGI EPF+SHLK A+DQISKGGYSI
Sbjct: 1 MDSRAILDSALFQLTPTRTRFDLVLFCGSKKEKLASGIFEPFVSHLKFARDQISKGGYSI 60
Query: 61 TLHPPVAHAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAE-- 118
+L PP +H+ WFTK+T RFVRFV+TP ++ERF T+EKEI+QIE+SIQ++E N
Sbjct: 61 SLTPPSSHSSWFTKSTFDRFVRFVNTPAIIERFATLEKEILQIENSIQANEIANAADALQ 120
Query: 119 -TEGNVSSADGRIKRSTTSKLKDELSGTNQEGYEENSRVRLQRVLDNRKAMLCKEQAMAY 177
+G+ S +K+S S K+ +G G EE S+++LQR+L+ R+ +L +EQAMAY
Sbjct: 121 LQDGSNSGDSSNLKKSNESSKKESENGNEVVG-EETSKIQLQRLLETRRTLLRREQAMAY 179
Query: 178 ARALVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKNEDKRWIDEIAAMQAFSH 237
AR +VAGY +S+DDLI FADAFGASRLR+AC+ + EL K+K+ D W+ E+AA++A +
Sbjct: 180 ARGVVAGYEIDSIDDLILFADAFGASRLREACIMYKELWKKKHGDGLWMAELAAVKACAP 239
Query: 238 PELPYLRTSGIILDGEDDPSNKLNGDGSISESTPSHASLDIGQGQTPSTDGRAQIPMSWQ 297
++ L +SGIIL E + LNG S+ +T + + Q PS Q PM W
Sbjct: 240 VDMSLLGSSGIILTNE-GAALSLNGTDSMPSNTDDKS---VNLEQHPSGVPNFQAPMGWP 295
Query: 298 NHHPQFIH--NFQGHAF 312
NH PQ+ + +QG+ +
Sbjct: 296 NHMPQYFYPSPYQGYPY 312
>AT1G61100.2 | Symbols: | disease resistance protein (TIR class),
putative | chr1:22508831-22512122 REVERSE LENGTH=807
Length = 807
Score = 291 bits (745), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 155/317 (48%), Positives = 214/317 (67%), Gaps = 11/317 (3%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSI 60
M+ + LD ALFQLTPTRTR DL++ G E+LASGI EPF+SHLK A+DQISKGGYSI
Sbjct: 1 MDSRAILDSALFQLTPTRTRFDLVLFCGSKKEKLASGIFEPFVSHLKFARDQISKGGYSI 60
Query: 61 TLHPPVAHAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAE-- 118
+L PP +H+ WFTK+T RFVRFV+TP ++ERF T+EKEI+QIE+SIQ++E N
Sbjct: 61 SLTPPSSHSSWFTKSTFDRFVRFVNTPAIIERFATLEKEILQIENSIQANEIANAADALQ 120
Query: 119 -TEGNVSSADGRIKRSTTSKLKDELSGTNQEGYEENSRVRLQRVLDNRKAMLCKEQAMAY 177
+G+ S +K+S S + E N+ EE S+++LQR+L+ R+ +L +EQAMAY
Sbjct: 121 LQDGSNSGDSSNLKKSNESSKESE--NGNEVVGEETSKIQLQRLLETRRTLLRREQAMAY 178
Query: 178 ARALVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKNEDKRWIDEIAAMQAFSH 237
AR +VAGY +S+DDLI FADAFGASRLR+AC+ + EL K+K+ D W+ E+AA++A +
Sbjct: 179 ARGVVAGYEIDSIDDLILFADAFGASRLREACIMYKELWKKKHGDGLWMAELAAVKACAP 238
Query: 238 PELPYLRTSGIILDGEDDPSNKLNGDGSISESTPSHASLDIGQGQTPSTDGRAQIPMSWQ 297
++ L +SGIIL E + LNG S+ +T + + Q PS Q PM W
Sbjct: 239 VDMSLLGSSGIILTNE-GAALSLNGTDSMPSNTDDKS---VNLEQHPSGVPNFQAPMGWP 294
Query: 298 NHHPQFIH--NFQGHAF 312
NH PQ+ + +QG+ +
Sbjct: 295 NHMPQYFYPSPYQGYPY 311
>AT5G43310.3 | Symbols: | COP1-interacting protein-related |
chr5:17379883-17385387 REVERSE LENGTH=1164
Length = 1164
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 194/355 (54%), Gaps = 45/355 (12%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSI 60
M+ ++RLD FQLTPTRTRCDL++ A G E++A+G+L+PFL+HLK+AKDQ+ KGGYSI
Sbjct: 1 MKSSTRLDSVAFQLTPTRTRCDLLVTANGKTEKIATGLLDPFLAHLKTAKDQLEKGGYSI 60
Query: 61 TLHPPVA-HAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAET 119
L P + +A WFTK T+ RFVRFVSTPEV+ER T+E EI+QI+++I +
Sbjct: 61 ILKPEASDNAAWFTKGTIERFVRFVSTPEVIERVYTLETEIIQIKEAIGIQNNSEMAL-- 118
Query: 120 EGNVSSADGRIKRSTTSKLKDELSGTNQEG----YE---------------ENSRVRLQR 160
V D R K++ +++ L N+E YE ENS+ ++ +
Sbjct: 119 --TVVKDDHRAKKADSAEGSRPLLQLNEEKAIVLYEPDSHPKQANRSTSSDENSKAQVMK 176
Query: 161 VLDNRKAMLCKEQAMAYARALVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKN 220
VL+ RK ML KEQ MA+ARA+ AG+ + + LI FA FGASRL ACV F++L K+K+
Sbjct: 177 VLETRKIMLQKEQGMAFARAVAAGFEADDMIPLISFAKTFGASRLMDACVKFMDLWKKKH 236
Query: 221 EDKRWIDEIAAMQAFSHPELPYLRTSGIILDGEDDPSNKLNGDGSISESTPSHASLDIGQ 280
E +W++ A + P + + SGI+ +N N G+ S + +
Sbjct: 237 ETGQWVEIEATEVMATQPNISTMNDSGIMF------ANAANMPGTPENSDAKSPTDNKRN 290
Query: 281 GQTPSTDGRAQIPM--SWQNHHPQFIHN-FQGHAFQQXXXXXXXXXXXXXAYYPG 332
G G+ + PM W H P FQG+ Q YYPG
Sbjct: 291 GNQEYVQGQHRQPMYAPWPVHSPPGTFPVFQGYTMQ------------GMPYYPG 333
>AT5G43310.4 | Symbols: | COP1-interacting protein-related |
chr5:17379883-17385387 REVERSE LENGTH=1164
Length = 1164
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 194/355 (54%), Gaps = 45/355 (12%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSI 60
M+ ++RLD FQLTPTRTRCDL++ A G E++A+G+L+PFL+HLK+AKDQ+ KGGYSI
Sbjct: 1 MKSSTRLDSVAFQLTPTRTRCDLLVTANGKTEKIATGLLDPFLAHLKTAKDQLEKGGYSI 60
Query: 61 TLHPPVA-HAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAET 119
L P + +A WFTK T+ RFVRFVSTPEV+ER T+E EI+QI+++I +
Sbjct: 61 ILKPEASDNAAWFTKGTIERFVRFVSTPEVIERVYTLETEIIQIKEAIGIQNNSEMAL-- 118
Query: 120 EGNVSSADGRIKRSTTSKLKDELSGTNQEG----YE---------------ENSRVRLQR 160
V D R K++ +++ L N+E YE ENS+ ++ +
Sbjct: 119 --TVVKDDHRAKKADSAEGSRPLLQLNEEKAIVLYEPDSHPKQANRSTSSDENSKAQVMK 176
Query: 161 VLDNRKAMLCKEQAMAYARALVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKN 220
VL+ RK ML KEQ MA+ARA+ AG+ + + LI FA FGASRL ACV F++L K+K+
Sbjct: 177 VLETRKIMLQKEQGMAFARAVAAGFEADDMIPLISFAKTFGASRLMDACVKFMDLWKKKH 236
Query: 221 EDKRWIDEIAAMQAFSHPELPYLRTSGIILDGEDDPSNKLNGDGSISESTPSHASLDIGQ 280
E +W++ A + P + + SGI+ +N N G+ S + +
Sbjct: 237 ETGQWVEIEATEVMATQPNISTMNDSGIMF------ANAANMPGTPENSDAKSPTDNKRN 290
Query: 281 GQTPSTDGRAQIPM--SWQNHHPQFIHN-FQGHAFQQXXXXXXXXXXXXXAYYPG 332
G G+ + PM W H P FQG+ Q YYPG
Sbjct: 291 GNQEYVQGQHRQPMYAPWPVHSPPGTFPVFQGYTMQ------------GMPYYPG 333
>AT5G43310.2 | Symbols: | COP1-interacting protein-related |
chr5:17379735-17385387 REVERSE LENGTH=1180
Length = 1180
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 194/355 (54%), Gaps = 45/355 (12%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSI 60
M+ ++RLD FQLTPTRTRCDL++ A G E++A+G+L+PFL+HLK+AKDQ+ KGGYSI
Sbjct: 1 MKSSTRLDSVAFQLTPTRTRCDLLVTANGKTEKIATGLLDPFLAHLKTAKDQLEKGGYSI 60
Query: 61 TLHPPVA-HAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAET 119
L P + +A WFTK T+ RFVRFVSTPEV+ER T+E EI+QI+++I +
Sbjct: 61 ILKPEASDNAAWFTKGTIERFVRFVSTPEVIERVYTLETEIIQIKEAIGIQNNSEMAL-- 118
Query: 120 EGNVSSADGRIKRSTTSKLKDELSGTNQEG----YE---------------ENSRVRLQR 160
V D R K++ +++ L N+E YE ENS+ ++ +
Sbjct: 119 --TVVKDDHRAKKADSAEGSRPLLQLNEEKAIVLYEPDSHPKQANRSTSSDENSKAQVMK 176
Query: 161 VLDNRKAMLCKEQAMAYARALVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKN 220
VL+ RK ML KEQ MA+ARA+ AG+ + + LI FA FGASRL ACV F++L K+K+
Sbjct: 177 VLETRKIMLQKEQGMAFARAVAAGFEADDMIPLISFAKTFGASRLMDACVKFMDLWKKKH 236
Query: 221 EDKRWIDEIAAMQAFSHPELPYLRTSGIILDGEDDPSNKLNGDGSISESTPSHASLDIGQ 280
E +W++ A + P + + SGI+ +N N G+ S + +
Sbjct: 237 ETGQWVEIEATEVMATQPNISTMNDSGIMF------ANAANMPGTPENSDAKSPTDNKRN 290
Query: 281 GQTPSTDGRAQIPM--SWQNHHPQFIHN-FQGHAFQQXXXXXXXXXXXXXAYYPG 332
G G+ + PM W H P FQG+ Q YYPG
Sbjct: 291 GNQEYVQGQHRQPMYAPWPVHSPPGTFPVFQGYTMQ------------GMPYYPG 333
>AT5G43310.1 | Symbols: | COP1-interacting protein-related |
chr5:17379735-17385387 REVERSE LENGTH=1237
Length = 1237
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 88/108 (81%), Gaps = 1/108 (0%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSI 60
M+ ++RLD FQLTPTRTRCDL++ A G E++A+G+L+PFL+HLK+AKDQ+ KGGYSI
Sbjct: 1 MKSSTRLDSVAFQLTPTRTRCDLLVTANGKTEKIATGLLDPFLAHLKTAKDQLEKGGYSI 60
Query: 61 TLHPPVA-HAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSI 107
L P + +A WFTK T+ RFVRFVSTPEV+ER T+E EI+QI+++I
Sbjct: 61 ILKPEASDNAAWFTKGTIERFVRFVSTPEVIERVYTLETEIIQIKEAI 108
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 87/181 (48%), Gaps = 21/181 (11%)
Query: 155 RVRLQRVLDNRKAMLCKEQAMAYARALVAGYYPESLDDLICFADAFGASRLRQACVNFLE 214
R ++ +VL+ RK ML KEQ MA+ARA+ AG+ + + LI FA FGASRL ACV F++
Sbjct: 228 RAQVMKVLETRKIMLQKEQGMAFARAVAAGFEADDMIPLISFAKTFGASRLMDACVKFMD 287
Query: 215 LCKQKNEDKRWIDEIAAMQAFSHPELPYLRTSGIILDGEDDPSNKLNGDGSISESTPSHA 274
L K+K+E +W++ A + P + + SGI+ +N N G+ S
Sbjct: 288 LWKKKHETGQWVEIEATEVMATQPNISTMNDSGIMF------ANAANMPGTPENSDAKSP 341
Query: 275 SLDIGQGQTPSTDGRAQIPM--SWQNHHPQFIHN-FQGHAFQQXXXXXXXXXXXXXAYYP 331
+ + G G+ + PM W H P FQG+ Q YYP
Sbjct: 342 TDNKRNGNQEYVQGQHRQPMYAPWPVHSPPGTFPVFQGYTMQ------------GMPYYP 389
Query: 332 G 332
G
Sbjct: 390 G 390
>AT3G14172.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: COP1-interacting protein-related
(TAIR:AT1G72410.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr3:4698860-4704773 REVERSE LENGTH=1270
Length = 1270
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 129/223 (57%), Gaps = 22/223 (9%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSI 60
M P LD+A+FQL+P R+RC+L + G E+LASG+++PF++HLK A++Q+S+ SI
Sbjct: 1 MRPAIPLDYAVFQLSPKRSRCELFVSTTGNTEKLASGLVKPFVAHLKVAEEQVSREVQSI 60
Query: 61 TLHPPVAH--APWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAE 118
L WFTK TL RFVRFVSTPEVLE ++ E+ Q+E + + +G
Sbjct: 61 RLEVESNKNAGTWFTKGTLERFVRFVSTPEVLELVSALDVEMSQLEAARKIYGEG----- 115
Query: 119 TEGNVSSADGRIKRSTTSKLKDELSGTNQEGYEENSRVRLQRVLDNRKAMLCKEQAMAYA 178
++D R S KD T+ + ++ L + +D R A + ++ A A
Sbjct: 116 ------TSDQR------SSAKD---STDTTPAADVTKKELLKAIDLRLAAVRQDLATACN 160
Query: 179 RALVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKNE 221
RA AG+ P ++ +L FAD FGA+RL +AC F+ LC+++ E
Sbjct: 161 RASAAGFNPITVSELSQFADRFGANRLNEACTKFITLCQRRPE 203
>AT3G14172.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: COP1-interacting protein-related
(TAIR:AT1G72410.1). | chr3:4698860-4704773 REVERSE
LENGTH=1262
Length = 1262
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 26/221 (11%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYSI 60
M P LD+A+FQL+P R+RC+L + G E+LASG+++PF++HLK A++Q+S+ SI
Sbjct: 1 MRPAIPLDYAVFQLSPKRSRCELFVSTTGNTEKLASGLVKPFVAHLKVAEEQVSREVQSI 60
Query: 61 TLHPPVAHAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAETE 120
L K FVRFVSTPEVLE ++ E+ Q+E + + +G
Sbjct: 61 RLEVES------NKNAGTWFVRFVSTPEVLELVSALDVEMSQLEAARKIYGEG------- 107
Query: 121 GNVSSADGRIKRSTTSKLKDELSGTNQEGYEENSRVRLQRVLDNRKAMLCKEQAMAYARA 180
++D R S KD T+ + ++ L + +D R A + ++ A A RA
Sbjct: 108 ----TSDQR------SSAKD---STDTTPAADVTKKELLKAIDLRLAAVRQDLATACNRA 154
Query: 181 LVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKNE 221
AG+ P ++ +L FAD FGA+RL +AC F+ LC+++ E
Sbjct: 155 SAAGFNPITVSELSQFADRFGANRLNEACTKFITLCQRRPE 195
>AT1G17360.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: COP1-interacting protein-related (TAIR:AT1G72410.1);
Has 9949 Blast hits to 7480 proteins in 576 species:
Archae - 12; Bacteria - 1007; Metazoa - 3636; Fungi -
982; Plants - 444; Viruses - 50; Other Eukaryotes - 3818
(source: NCBI BLink). | chr1:5947441-5951399 FORWARD
LENGTH=1061
Length = 1061
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 118/222 (53%), Gaps = 36/222 (16%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISKGGYS- 59
M+ ++ LD+A+F+L+P +RC+L + + E+LASG++EPF++HL+ + Q SK S
Sbjct: 1 MKADTVLDYAVFELSPKYSRCELFVSSNEEREKLASGLIEPFVNHLRVIESQASKRDQSS 60
Query: 60 --ITLHPPVAHAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVA 117
+ + WFT+ TL RFV++V++PEVLER T + E+ Q+E + L +
Sbjct: 61 VRLEVEQSENGESWFTRRTLERFVQYVNSPEVLERVNTFDLEMSQLEAA------RTLYS 114
Query: 118 ETEGNVSSADGRIKRSTTSKLKDELSGTNQEGYEENSRVRLQRVLDNRKAMLCKEQAMAY 177
+ +G V+ A T +E L R +D R + K+ A
Sbjct: 115 QDDGGVADA------------------TQKE---------LVRAIDLRLEAIKKDLTTAI 147
Query: 178 ARALVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQK 219
A A G+ P+++ DL FAD FGA L +AC ++ L +++
Sbjct: 148 AHASANGFDPQTVSDLQRFADRFGAHHLNEACSKYISLSQRR 189
>AT1G72410.2 | Symbols: | COP1-interacting protein-related |
chr1:27251535-27256246 REVERSE LENGTH=1270
Length = 1270
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 124/239 (51%), Gaps = 27/239 (11%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISK-GGYS 59
M ++ LD+ +F+L+P ++C+L + + E+LASG+++PF++HLK + + S S
Sbjct: 1 MRSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASGLIQPFVNHLKVLEAKASPVAQSS 60
Query: 60 ITLHPPVAHAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAET 119
I L ++ WFTK TL RFV+FV++PE LE+ T E++Q+E A T
Sbjct: 61 IRLEVEKSNT-WFTKRTLERFVQFVNSPETLEKVNTYYSEMLQLE-----------AART 108
Query: 120 EGNVSSADGRIKRSTTSKLKDELSGTNQEGYEENSRVRLQRVLDNRKAMLCKEQAMAYAR 179
+ S D + ++ + ++ L + +D R + K+ + +
Sbjct: 109 LYSQRSEDSK------------FGASDDGAAADATKKELLKAIDLRLEAIKKDLTTSISH 156
Query: 180 ALVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKNE--DKRWIDEIAAMQAFS 236
A +G+ P ++ +L FAD F A L +AC ++ L KQ+ + D ++ +++A + S
Sbjct: 157 ASASGFDPHTVSELKQFADRFSAHHLDEACSKYISLWKQRPDLIDMKYSNQLAGVDNVS 215
>AT1G72410.1 | Symbols: | COP1-interacting protein-related |
chr1:27251949-27256246 REVERSE LENGTH=1163
Length = 1163
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 124/239 (51%), Gaps = 27/239 (11%)
Query: 1 MEPNSRLDHALFQLTPTRTRCDLIIVAGGVNERLASGILEPFLSHLKSAKDQISK-GGYS 59
M ++ LD+ +F+L+P ++C+L + + E+LASG+++PF++HLK + + S S
Sbjct: 1 MRSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASGLIQPFVNHLKVLEAKASPVAQSS 60
Query: 60 ITLHPPVAHAPWFTKATLLRFVRFVSTPEVLERFVTIEKEIVQIEDSIQSSEKGNLVAET 119
I L ++ WFTK TL RFV+FV++PE LE+ T E++Q+E A T
Sbjct: 61 IRLEVEKSNT-WFTKRTLERFVQFVNSPETLEKVNTYYSEMLQLE-----------AART 108
Query: 120 EGNVSSADGRIKRSTTSKLKDELSGTNQEGYEENSRVRLQRVLDNRKAMLCKEQAMAYAR 179
+ S D + ++ + ++ L + +D R + K+ + +
Sbjct: 109 LYSQRSEDSK------------FGASDDGAAADATKKELLKAIDLRLEAIKKDLTTSISH 156
Query: 180 ALVAGYYPESLDDLICFADAFGASRLRQACVNFLELCKQKNE--DKRWIDEIAAMQAFS 236
A +G+ P ++ +L FAD F A L +AC ++ L KQ+ + D ++ +++A + S
Sbjct: 157 ASASGFDPHTVSELKQFADRFSAHHLDEACSKYISLWKQRPDLIDMKYSNQLAGVDNVS 215