Miyakogusa Predicted Gene
- Lj3g3v0462450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0462450.1 Non Chatacterized Hit- tr|I1K677|I1K677_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27558
PE,38.18,3e-18,seg,NULL; PROTEIN BINDING / ZINC ION BINDING,NULL; RING
FINGER AND PROTEASE ASSOCIATED
DOMAIN-CONTAI,NODE_73965_length_1135_cov_18.489868.path2.1
(735 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75381 similar to UniRef100_A7Q7T5 Cluster: Chromosome... 478 e-134
gnl|LJGI|AV767167 145 4e-34
>gnl|LJGI|TC75381 similar to UniRef100_A7Q7T5 Cluster: Chromosome chr18 scaffold_61,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 504
Score = 478 bits (241), Expect = e-134
Identities = 241/241 (100%)
Strand = Plus / Plus
Query: 158 gtcctcgaagggtggattgggcttctctcagaatgagatcatcactctccgtttcacagg 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtcctcgaagggtggattgggcttctctcagaatgagatcatcactctccgtttcacagg 323
Query: 218 atgacaatgacaatggcaatgacatctccacttctggtgcttgtttggggttgaagaaag 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgacaatgacaatggcaatgacatctccacttctggtgcttgtttggggttgaagaaag 383
Query: 278 aatttagagaaatgctgcctattattgtgtacagggaaagcttctccgtcaatgacacac 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatttagagaaatgctgcctattattgtgtacagggaaagcttctccgtcaatgacacac 443
Query: 338 aatgctcagtgtgccttttggactaccaagcagaagatagacttcaacagataccggcat 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatgctcagtgtgccttttggactaccaagcagaagatagacttcaacagataccggcat 503
Query: 398 g 398
|
Sbjct: 504 g 504
Score = 176 bits (89), Expect = 1e-43
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 atgtctgaatcatactcagactcagattccagttgttgctcaactagatctgatgctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 atgtctgaatcatactcagactcagattccagttgttgctcaactagatctgatgctgct 166
Query: 61 gcttcagctgaactgaagctgtaccgagc 89
|||||||||||||||||||||||||||||
Sbjct: 167 gcttcagctgaactgaagctgtaccgagc 195
>gnl|LJGI|AV767167
Length = 313
Score = 145 bits (73), Expect = 4e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 663 aattggcgctcactgcattgatgttgaagggcaaaatgcacaacacaatcaattggagca 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aattggcgctcactgcattgatgttgaagggcaaaatgcacaacacaatcaattggagca 254
Query: 723 tgaatatatatga 735
|||||||||||||
Sbjct: 253 tgaatatatatga 241