Miyakogusa Predicted Gene

Lj3g3v0462200.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0462200.1 Non Chatacterized Hit- tr|I1K677|I1K677_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27558
PE,38.18,3e-18,PROTEIN BINDING / ZINC ION BINDING,NULL; RING FINGER
AND PROTEASE ASSOCIATED DOMAIN-CONTAINING,NULL;,gene.g45486.t1.1
         (828 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75381 similar to UniRef100_A7Q7T5 Cluster: Chromosome...   478   e-134
gnl|LJGI|AV767167                                                     145   5e-34

>gnl|LJGI|TC75381 similar to UniRef100_A7Q7T5 Cluster: Chromosome chr18 scaffold_61,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_61, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 504

 Score =  478 bits (241), Expect = e-134
 Identities = 241/241 (100%)
 Strand = Plus / Plus

                                                                       
Query: 251 gtcctcgaagggtggattgggcttctctcagaatgagatcatcactctccgtttcacagg 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtcctcgaagggtggattgggcttctctcagaatgagatcatcactctccgtttcacagg 323

                                                                       
Query: 311 atgacaatgacaatggcaatgacatctccacttctggtgcttgtttggggttgaagaaag 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgacaatgacaatggcaatgacatctccacttctggtgcttgtttggggttgaagaaag 383

                                                                       
Query: 371 aatttagagaaatgctgcctattattgtgtacagggaaagcttctccgtcaatgacacac 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatttagagaaatgctgcctattattgtgtacagggaaagcttctccgtcaatgacacac 443

                                                                       
Query: 431 aatgctcagtgtgccttttggactaccaagcagaagatagacttcaacagataccggcat 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatgctcagtgtgccttttggactaccaagcagaagatagacttcaacagataccggcat 503

            
Query: 491 g 491
           |
Sbjct: 504 g 504



 Score =  214 bits (108), Expect = 7e-55
 Identities = 108/108 (100%)
 Strand = Plus / Plus

                                                                       
Query: 75  cctgcatgggaaatctgtgatgtctgaatcatactcagactcagattccagttgttgctc 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  cctgcatgggaaatctgtgatgtctgaatcatactcagactcagattccagttgttgctc 147

                                                           
Query: 135 aactagatctgatgctgctgcttcagctgaactgaagctgtaccgagc 182
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aactagatctgatgctgctgcttcagctgaactgaagctgtaccgagc 195


>gnl|LJGI|AV767167 
          Length = 313

 Score =  145 bits (73), Expect = 5e-34
 Identities = 73/73 (100%)
 Strand = Plus / Minus

                                                                       
Query: 756 aattggcgctcactgcattgatgttgaagggcaaaatgcacaacacaatcaattggagca 815
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aattggcgctcactgcattgatgttgaagggcaaaatgcacaacacaatcaattggagca 254

                        
Query: 816 tgaatatatatga 828
           |||||||||||||
Sbjct: 253 tgaatatatatga 241