Miyakogusa Predicted Gene

Lj3g3v0461700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0461700.1 tr|G7JLY2|G7JLY2_MEDTR Pseudouridine-5'-phosphate
glycosidase OS=Medicago truncatula
GN=MTR_4g031220,83.44,0,PsiMP_glycosidase,Pseudouridine-5'-phosphate
glycosidase; Indigoidine synthase A-like,Indigoidine sy,CUFF.40807.1
         (320 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g00500.1                                                       542   e-154
Glyma09g00500.2                                                       506   e-143

>Glyma09g00500.1 
          Length = 339

 Score =  542 bits (1397), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 269/320 (84%), Positives = 289/320 (90%), Gaps = 4/320 (1%)

Query: 1   MESSALSRLTNLRRHFDSADTATKGTGVNAGGGSMKVKVASEVSEALSQGRAVVALESTI 60
           M  SA+ RL NL RH D +++  K   V    GS+K+KVASEVSEALS GRAVVALESTI
Sbjct: 1   MAFSAVWRLANLGRHLDLSESVNKAAPV----GSIKLKVASEVSEALSLGRAVVALESTI 56

Query: 61  ISHGMPYPQNLETAKEVEGIVRENGAVPATIAILDGTPCIGLSVEELERLATLGTRAQKT 120
           ISHGMPYPQNLETAKEVE IVRENGAVPATIAILDGTPC+GLSVEELERLA LGTRAQKT
Sbjct: 57  ISHGMPYPQNLETAKEVERIVRENGAVPATIAILDGTPCVGLSVEELERLAILGTRAQKT 116

Query: 121 ARRDIAFVVASGGNGATTVSATMFFASMVHIPVFVTGGIGGVHRHGEYTMDISSDLTELG 180
           ARRDIA VVA GGNGATTVSATM FASMVHIPVFVTGGIGGVHRH E TMDISSDLTELG
Sbjct: 117 ARRDIAHVVACGGNGATTVSATMLFASMVHIPVFVTGGIGGVHRHSEQTMDISSDLTELG 176

Query: 181 RTPVAVICAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTESSGCKAPCRVDTPED 240
           RTPV V+CAGVKSILDIPRTLEYLET GVCVAAYKTNEFPAFFTESSGCK  CRVDTPED
Sbjct: 177 RTPVTVVCAGVKSILDIPRTLEYLETLGVCVAAYKTNEFPAFFTESSGCKVSCRVDTPED 236

Query: 241 FARIIEANVKLKLGSGILLAVPIPREHSTSGHVIESAIQKALEEARENNITGNAQTPFLL 300
            A +IEA++KLKLG+GIL+AVPIP+EHSTSGH+IESAIQKA++EARE NITGNA+TPFLL
Sbjct: 237 CASLIEASIKLKLGTGILIAVPIPQEHSTSGHIIESAIQKAIKEAREKNITGNAETPFLL 296

Query: 301 ARVNELTGGASLASNIALVK 320
           ARVN+LTGGASLA+NIALVK
Sbjct: 297 ARVNDLTGGASLAANIALVK 316


>Glyma09g00500.2 
          Length = 327

 Score =  506 bits (1304), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 257/320 (80%), Positives = 277/320 (86%), Gaps = 16/320 (5%)

Query: 1   MESSALSRLTNLRRHFDSADTATKGTGVNAGGGSMKVKVASEVSEALSQGRAVVALESTI 60
           M  SA+ RL NL RH D +++  K   V    GS+K+KVASEVSEALS GRAVVALESTI
Sbjct: 1   MAFSAVWRLANLGRHLDLSESVNKAAPV----GSIKLKVASEVSEALSLGRAVVALESTI 56

Query: 61  ISHGMPYPQNLETAKEVEGIVRENGAVPATIAILDGTPCIGLSVEELERLATLGTRAQKT 120
           ISH            EVE IVRENGAVPATIAILDGTPC+GLSVEELERLA LGTRAQKT
Sbjct: 57  ISH------------EVERIVRENGAVPATIAILDGTPCVGLSVEELERLAILGTRAQKT 104

Query: 121 ARRDIAFVVASGGNGATTVSATMFFASMVHIPVFVTGGIGGVHRHGEYTMDISSDLTELG 180
           ARRDIA VVA GGNGATTVSATM FASMVHIPVFVTGGIGGVHRH E TMDISSDLTELG
Sbjct: 105 ARRDIAHVVACGGNGATTVSATMLFASMVHIPVFVTGGIGGVHRHSEQTMDISSDLTELG 164

Query: 181 RTPVAVICAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTESSGCKAPCRVDTPED 240
           RTPV V+CAGVKSILDIPRTLEYLET GVCVAAYKTNEFPAFFTESSGCK  CRVDTPED
Sbjct: 165 RTPVTVVCAGVKSILDIPRTLEYLETLGVCVAAYKTNEFPAFFTESSGCKVSCRVDTPED 224

Query: 241 FARIIEANVKLKLGSGILLAVPIPREHSTSGHVIESAIQKALEEARENNITGNAQTPFLL 300
            A +IEA++KLKLG+GIL+AVPIP+EHSTSGH+IESAIQKA++EARE NITGNA+TPFLL
Sbjct: 225 CASLIEASIKLKLGTGILIAVPIPQEHSTSGHIIESAIQKAIKEAREKNITGNAETPFLL 284

Query: 301 ARVNELTGGASLASNIALVK 320
           ARVN+LTGGASLA+NIALVK
Sbjct: 285 ARVNDLTGGASLAANIALVK 304