Miyakogusa Predicted Gene

Lj3g3v0461700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0461700.1 tr|G7JLY2|G7JLY2_MEDTR Pseudouridine-5'-phosphate
glycosidase OS=Medicago truncatula
GN=MTR_4g031220,83.44,0,PsiMP_glycosidase,Pseudouridine-5'-phosphate
glycosidase; Indigoidine synthase A-like,Indigoidine sy,CUFF.40807.1
         (320 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50510.1 | Symbols:  | indigoidine synthase A family protein ...   463   e-131

>AT1G50510.1 | Symbols:  | indigoidine synthase A family protein |
           chr1:18716578-18719060 FORWARD LENGTH=330
          Length = 330

 Score =  463 bits (1192), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 230/318 (72%), Positives = 265/318 (83%), Gaps = 8/318 (2%)

Query: 3   SSALSRLTNLRRHFDSADTATKGTGVNAGGGSMKVKVASEVSEALSQGRAVVALESTIIS 62
           S A SR++NL+ H    +   K   +        VK++ +VSEALS GRAVVALESTIIS
Sbjct: 4   SLAQSRISNLQNHLSPLEANNKLRSL--------VKISPQVSEALSNGRAVVALESTIIS 55

Query: 63  HGMPYPQNLETAKEVEGIVRENGAVPATIAILDGTPCIGLSVEELERLATLGTRAQKTAR 122
           HGMPYPQNL+TAKEVE IVRENGA+PATIAIL+G PCIGLS EELERLA+LG   QKTA 
Sbjct: 56  HGMPYPQNLQTAKEVESIVRENGAIPATIAILNGVPCIGLSEEELERLASLGKSVQKTAG 115

Query: 123 RDIAFVVASGGNGATTVSATMFFASMVHIPVFVTGGIGGVHRHGEYTMDISSDLTELGRT 182
           RDIA VVA+ GNGATTVSAT+FFASMV I VFVTGGIGGVHRH  ++MDISSDLT LGRT
Sbjct: 116 RDIANVVATRGNGATTVSATLFFASMVGIQVFVTGGIGGVHRHANHSMDISSDLTALGRT 175

Query: 183 PVAVICAGVKSILDIPRTLEYLETQGVCVAAYKTNEFPAFFTESSGCKAPCRVDTPEDFA 242
           P+AVI AGVKSILDIP+TLEYLETQ V VAAYK++EFPAFFTE SGCKAP RV++PED A
Sbjct: 176 PIAVISAGVKSILDIPKTLEYLETQEVYVAAYKSDEFPAFFTEKSGCKAPSRVNSPEDCA 235

Query: 243 RIIEANVKLKLGSGILLAVPIPREHSTSGHVIESAIQKALEEARENNITGNAQTPFLLAR 302
           R+I+AN+KL   +GIL A+PIP+ HS +G++IESA Q+AL EARE N+TGNA+TPFLLAR
Sbjct: 236 RVIDANMKLNRQAGILFAIPIPKHHSAAGNLIESATQRALTEAREQNVTGNAETPFLLAR 295

Query: 303 VNELTGGASLASNIALVK 320
           VNELTGG SLA+NIALVK
Sbjct: 296 VNELTGGTSLAANIALVK 313