Miyakogusa Predicted Gene

Lj3g3v0427290.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0427290.2 tr|G5AQS9|G5AQS9_HETGA Rab3 GTPase-activating
protein non-catalytic subunit OS=Heterocephalus
glaber,31.08,3e-18,RAB3-GAP REGULATORY DOMAIN,Rab3-GAP regulatory
subunit,CUFF.40694.2
         (344 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g32870.1                                                       611   e-175
Glyma12g18240.1                                                       322   4e-88
Glyma03g09040.1                                                        74   2e-13
Glyma01g07210.1                                                        74   2e-13
Glyma15g39280.1                                                        73   4e-13

>Glyma06g32870.1 
          Length = 460

 Score =  611 bits (1576), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 301/345 (87%), Positives = 323/345 (93%), Gaps = 5/345 (1%)

Query: 1   MIYPGRVLKLRVRGTKKDLIQDSSSEEFCLIMPGVIARFDSSDIQNMLQKWFEESQSQLW 60
           MIYP RVLKLRVRGTKKDLIQD+SSEEFCLIM GVIARFD SDIQNMLQKWFEE+ S+  
Sbjct: 120 MIYPERVLKLRVRGTKKDLIQDTSSEEFCLIMSGVIARFDGSDIQNMLQKWFEEANSRFS 179

Query: 61  NQKPKREDSEDFEHSHVKLPYQVWNVGKYGTCADAAITGIMPPPLMEQQ-SSQRYYCAVA 119
           +Q PK +DSEDFE++ VK+PYQ+WN+GKYGTCADAAITGIMPPPLMEQQ S+QRYYCAVA
Sbjct: 180 DQNPKSQDSEDFENTDVKIPYQLWNIGKYGTCADAAITGIMPPPLMEQQQSNQRYYCAVA 239

Query: 120 VGEDAVISAYRLSEDKGRSLVGAILSKVVPAAFSTVASFSKLIWRSEPASPKKSPRKSDQ 179
           VGEDAVISAYRLSE+KGRSLVGAILSKVVPA FST++SFSKLIWR+E    + SP+KSD 
Sbjct: 240 VGEDAVISAYRLSENKGRSLVGAILSKVVPATFSTISSFSKLIWRNE----RSSPKKSDL 295

Query: 180 KPQPFARASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYR 239
           KP+PFARASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYR
Sbjct: 296 KPRPFARASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYR 355

Query: 240 DASCLFMEMLVNKDTASSSSTYYEPMKSDYCLCLAIHAPRKGIIEIWQMRTGPRLRTIPC 299
           DASCLFMEMLVNKD ASSSS+Y EP+KSDYCLCLAIHAPRKGIIEIWQMRTG RLRTI C
Sbjct: 356 DASCLFMEMLVNKDIASSSSSYSEPLKSDYCLCLAIHAPRKGIIEIWQMRTGQRLRTISC 415

Query: 300 AKGSKMLQPTYRFGASISSPYVPLEVFLLNGDSGQISVLNRTLDS 344
            KGSKMLQP+YRFGAS+SSPYVPLEVFLLNGDSGQISVLNRTLDS
Sbjct: 416 TKGSKMLQPSYRFGASVSSPYVPLEVFLLNGDSGQISVLNRTLDS 460


>Glyma12g18240.1 
          Length = 304

 Score =  322 bits (824), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 156/188 (82%), Positives = 169/188 (89%), Gaps = 5/188 (2%)

Query: 1   MIYPGRVLKLRVRGTKKDLIQDSSSEEFCLIMPGVIARFDSSDIQNMLQKWFEESQSQLW 60
           MIYP RVLKLRVRGTKKDLIQD+SSEEFCLIM GVIA FD SDIQNMLQKWFEES S+ W
Sbjct: 119 MIYPSRVLKLRVRGTKKDLIQDTSSEEFCLIMSGVIAHFDGSDIQNMLQKWFEESHSRFW 178

Query: 61  NQKPKREDSEDFEHSHVKLPYQVWNVGKYGTCADAAITGIMPPPLME-QQSSQRYYCAVA 119
           +Q PK  DSEDF ++ VK+PYQ+WN+GKYGTCA+AAITGIMPPPLME QQSSQRYYCAVA
Sbjct: 179 DQNPKSHDSEDFGNTDVKIPYQLWNIGKYGTCAEAAITGIMPPPLMEQQQSSQRYYCAVA 238

Query: 120 VGEDAVISAYRLSEDKGRSLVGAILSKVVPAAFSTVASFSKLIWRSEPASPKKSPRKSDQ 179
           VGEDAVISAYRLSE+KGRSLVGAILSKVVPA FST++SFSKLIWRSE +SPK    KSDQ
Sbjct: 239 VGEDAVISAYRLSENKGRSLVGAILSKVVPATFSTISSFSKLIWRSEQSSPK----KSDQ 294

Query: 180 KPQPFARA 187
           KPQPFAR 
Sbjct: 295 KPQPFARG 302


>Glyma03g09040.1 
          Length = 146

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/53 (71%), Positives = 43/53 (81%), Gaps = 4/53 (7%)

Query: 136 GRSLVGAILSKVVPAAFSTVASFSKLIWRSEPASPKKSPRKSDQKPQPFARAS 188
           G  ++ AILSKVVPA FST++SFSKLIWRSE +SPK    KSDQKPQPFAR S
Sbjct: 61  GIRILKAILSKVVPATFSTISSFSKLIWRSEQSSPK----KSDQKPQPFARGS 109


>Glyma01g07210.1 
          Length = 160

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 4/48 (8%)

Query: 140 VGAILSKVVPAAFSTVASFSKLIWRSEPASPKKSPRKSDQKPQPFARA 187
           +GAILSKVVPA FST++SFSKLIWRSE +SPK    KSDQKPQPFAR 
Sbjct: 59  LGAILSKVVPATFSTISSFSKLIWRSEQSSPK----KSDQKPQPFARV 102


>Glyma15g39280.1 
          Length = 168

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/57 (66%), Positives = 44/57 (77%), Gaps = 4/57 (7%)

Query: 131 LSEDKGRSLVGAILSKVVPAAFSTVASFSKLIWRSEPASPKKSPRKSDQKPQPFARA 187
           L+   G  ++ AILSKVVPAAFST+ SFSKLIWRSE    + SP+KSDQKPQPFAR 
Sbjct: 58  LTCSVGIRILKAILSKVVPAAFSTITSFSKLIWRSE----QSSPQKSDQKPQPFARV 110