Miyakogusa Predicted Gene
- Lj3g3v0427290.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v0427290.2 tr|G5AQS9|G5AQS9_HETGA Rab3 GTPase-activating
protein non-catalytic subunit OS=Heterocephalus
glaber,31.08,3e-18,RAB3-GAP REGULATORY DOMAIN,Rab3-GAP regulatory
subunit,CUFF.40694.2
(1035 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76274 weakly similar to UniRef100_A7P201 Cluster: Chr... 783 0.0
gnl|LJGI|TC72790 similar to UniRef100_A7P201 Cluster: Chromosome... 640 0.0
gnl|LJGI|TC69904 similar to UniRef100_A7P201 Cluster: Chromosome... 422 e-117
>gnl|LJGI|TC76274 weakly similar to UniRef100_A7P201 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 905
Score = 783 bits (395), Expect = 0.0
Identities = 395/395 (100%)
Strand = Plus / Plus
Query: 1 atgatttatcctggacgtgttttgaagttgagagttcgcggaacgaagaaagatttgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atgatttatcctggacgtgttttgaagttgagagttcgcggaacgaagaaagatttgatt 570
Query: 61 caagactcttcttcagaagagttttgtctcattatgcctggtgtgattgcccgttttgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 caagactcttcttcagaagagttttgtctcattatgcctggtgtgattgcccgttttgat 630
Query: 121 agctctgatattcagaatatgctgcagaaatggtttgaagaatcgcaatctcagttatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 agctctgatattcagaatatgctgcagaaatggtttgaagaatcgcaatctcagttatgg 690
Query: 181 aatcaaaagccaaagagggaagattcagaggattttgaacattcccatgtgaaattacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aatcaaaagccaaagagggaagattcagaggattttgaacattcccatgtgaaattacct 750
Query: 241 taccaggtgtggaatgttggcaagtatggtacttgtgctgatgccgcaatcactgggata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 taccaggtgtggaatgttggcaagtatggtacttgtgctgatgccgcaatcactgggata 810
Query: 301 atgcctccaccactgatggaacagcagtcaagtcaacgttattattgtgcagtggctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 atgcctccaccactgatggaacagcagtcaagtcaacgttattattgtgcagtggctgtt 870
Query: 361 ggagaggatgctgtgatttcagcttacagactttc 395
|||||||||||||||||||||||||||||||||||
Sbjct: 871 ggagaggatgctgtgatttcagcttacagactttc 905
>gnl|LJGI|TC72790 similar to UniRef100_A7P201 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 793
Score = 640 bits (323), Expect = 0.0
Identities = 326/327 (99%)
Strand = Plus / Plus
Query: 1 atgatttatcctggacgtgttttgaagttgagagttcgcggaacgaagaaagatttgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atgatttatcctggacgtgttttgaagttgagagttcgcggaacgaagaaagatttgatt 471
Query: 61 caagactcttcttcagaagagttttgtctcattatgcctggtgtgattgcccgttttgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 caagactcttcttcagaagagttttgtctcattatgcctggtgtgattgcccgttttgat 531
Query: 121 agctctgatattcagaatatgctgcagaaatggtttgaagaatcgcaatctcagttatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 agctctgatattcagaatatgctgcagaaatggtttgaagaatcgcaatctcagttatgg 591
Query: 181 aatcaaaagccaaagagggaagattcagaggattttgaacattcccatgtgaaattacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aatcaaaagccaaagagggaagattcagaggattttgaacattcccatgtgaaattacct 651
Query: 241 taccaggtgtggaatgttggcaagtatggtacttgtgctgatgccgcaatcactgggata 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 652 taccaggtgtggaatgttggcaagtatggtacttgtgctgatgccgcaatcactgggaca 711
Query: 301 atgcctccaccactgatggaacagcag 327
|||||||||||||||||||||||||||
Sbjct: 712 atgcctccaccactgatggaacagcag 738
>gnl|LJGI|TC69904 similar to UniRef100_A7P201 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 681
Score = 422 bits (213), Expect = e-117
Identities = 213/213 (100%)
Strand = Plus / Plus
Query: 823 attcatgcaccaagaaaaggaattattgagatctggcaaatgagaactgggccacgactt 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attcatgcaccaagaaaaggaattattgagatctggcaaatgagaactgggccacgactt 60
Query: 883 agaacgattccatgtgctaaaggtagcaagatgttgcaacccacctacaggtttggtgca 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaacgattccatgtgctaaaggtagcaagatgttgcaacccacctacaggtttggtgca 120
Query: 943 tccatatcctctccatatgtcccgctggaagttttcttgttaaatggggactcgggtcag 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccatatcctctccatatgtcccgctggaagttttcttgttaaatggggactcgggtcag 180
Query: 1003 atatcagtcttaaaccgaaccttggattcttga 1035
|||||||||||||||||||||||||||||||||
Sbjct: 181 atatcagtcttaaaccgaaccttggattcttga 213