Miyakogusa Predicted Gene

Lj3g3v0392820.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v0392820.1 tr|B9HI16|B9HI16_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_872186 PE=4 SV=1,75.85,0,Protein
kinase-like (PK-like),Protein kinase-like domain;
PROTEIN_KINASE_DOM,Protein kinase, catalyt,CUFF.40612.1
         (881 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76907 homologue to UniRef100_P15792 Cluster: Protein ...    66   4e-10
gnl|LJGI|TC69470 similar to UniRef100_A7PPG5 Cluster: Chromosome...    64   2e-09
gnl|LJGI|TC61541 homologue to UniRef100_A7Q9B0 Cluster: Chromoso...    54   2e-06
gnl|LJGI|TC72048                                                       52   6e-06

>gnl|LJGI|TC76907 homologue to UniRef100_P15792 Cluster: Protein kinase PVPK-1; n=1;
            Phaseolus vulgaris|Rep: Protein kinase PVPK-1 - Phaseolus
            vulgaris (Kidney bean) (French bean), partial (73%)
          Length = 2457

 Score = 65.9 bits (33), Expect = 4e-10
 Identities = 99/121 (81%)
 Strand = Plus / Plus

                                                                        
Query: 447  ggattggtggacattcggaatattcctctacgagcttcttcatggaacgacgccgtttaa 506
            ||||||||||||||| || |||||| | |||||||||||   |||||  || ||||| ||
Sbjct: 1847 ggattggtggacatttgggatattcttgtacgagcttctatttggaagaacaccgttcaa 1906

                                                                        
Query: 507  gggcgctgggaatcgtgccacgcttttcaatgtggtgggccagcctttgaggtttccaga 566
             ||| | | |||||| || || || |||||||| || ||||||||||| |||||||||||
Sbjct: 1907 aggctcggcgaatcgagcgactctgttcaatgtagttggccagcctttaaggtttccaga 1966

             
Query: 567  a 567
            |
Sbjct: 1967 a 1967



 Score = 56.0 bits (28), Expect = 4e-07
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                
Query: 41   tggagtaccttcacatgctcggcatcgtctacagagacctaaaaccagagaa 92
            |||||||| | ||||||||||| ||| ||||||||||||| ||||| |||||
Sbjct: 1405 tggagtacttgcacatgctcgggatcatctacagagacctgaaacctgagaa 1456


>gnl|LJGI|TC69470 similar to UniRef100_A7PPG5 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 663

 Score = 63.9 bits (32), Expect = 2e-09
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 594 agcgagggatcttattagagggttgttggtgaaagagcct 633
           |||||||||||| ||||||||||||||||| |||||||||
Sbjct: 170 agcgagggatctcattagagggttgttggttaaagagcct 209


>gnl|LJGI|TC61541 homologue to UniRef100_A7Q9B0 Cluster: Chromosome chr19 scaffold_66,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_66, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (89%)
          Length = 1436

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 649  tataagagaggtgctactgagattaagcaacatcc 683
            ||||| ||||| |||||||||||||||||||||||
Sbjct: 984  tataaaagaggcgctactgagattaagcaacatcc 1018


>gnl|LJGI|TC72048 
          Length = 1440

 Score = 52.0 bits (26), Expect = 6e-06
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 383 tcgtcggaactcacgagtatctcgcgccggagattgttcgcggcgaggggcacg 436
           ||||||||||  | |||||  ||||||||||| ||||||||||||| |||||||
Sbjct: 751 tcgtcggaacagaggagtacgtcgcgccggaggttgttcgcggcgacgggcacg 804