Miyakogusa Predicted Gene
- Lj3g3v0382770.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0382770.1 tr|Q2HUG6|Q2HUG6_MEDTR Peptidase C14, caspase
catalytic subunit p20 OS=Medicago truncatula
GN=MtrDRA,54.22,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Peptidase_C14,Peptidase C14, caspase cata,CUFF.40654.1
(376 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma15g31750.1 494 e-140
Glyma08g25170.1 460 e-130
Glyma08g25150.1 441 e-124
Glyma08g17320.1 295 8e-80
Glyma15g30130.1 253 3e-67
Glyma19g30180.1 108 1e-23
Glyma15g05940.1 56 8e-08
Glyma08g07630.1 54 2e-07
Glyma15g05960.1 54 2e-07
Glyma13g07870.1 49 8e-06
>Glyma15g31750.1
Length = 415
Score = 494 bits (1273), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/373 (68%), Positives = 277/373 (74%), Gaps = 11/373 (2%)
Query: 5 SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
SYTEPTGKNIR LTRLVRSAE GDVL VHYSGHGTRLPA CIVPSDMN
Sbjct: 53 SYTEPTGKNIRSALTRLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMN 112
Query: 65 LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQIXXXXXXXXXXXXXXXXXXXX 124
LITDDDFREFV+ V RG ++TIVSDSCHSGGL+EEAKEQI
Sbjct: 113 LITDDDFREFVDGVPRGCRITIVSDSCHSGGLLEEAKEQIGESTKGEEEQSSSGFGFSSF 172
Query: 125 XXXXXXXRTVEDAIESRGFHVPSALSH-RGXXXXXXXXXXXXXXXIELPDGSRGYVKNRS 183
RTVEDAIESRGFH+PSAL H RG IELPDG GYVKNRS
Sbjct: 173 LH-----RTVEDAIESRGFHIPSALRHNRGRDDDGDEAQNRD---IELPDG--GYVKNRS 222
Query: 184 LPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXXXXXXX 243
LPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFM VI NKLQH
Sbjct: 223 LPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMNVIFNKLQHGSDESGG 282
Query: 244 XXXXXXXSLAQEFLKQKLDENDEGYAKPAMETEVGSKQEVYAGSAKRGLPDGGVLLSGCQ 303
LAQEFLKQKLD+NDEGYAKPA+ET+V SK E YAG KRGLPDGG+L+SGCQ
Sbjct: 283 GILGLVGGLAQEFLKQKLDDNDEGYAKPALETKVESKHEAYAGPTKRGLPDGGILMSGCQ 342
Query: 304 TDQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKELERQGFTQRPGL 363
TDQTSADA+PAGN +AYGAFSNAIQ I+E++DG ITN ELV +AR++L+ GFTQ+PGL
Sbjct: 343 TDQTSADASPAGNAASAYGAFSNAIQAIIEETDGAITNQELVQRAREKLKNSGFTQKPGL 402
Query: 364 YCSDHHVDASFVC 376
YCSDHHVDA FVC
Sbjct: 403 YCSDHHVDAPFVC 415
>Glyma08g25170.1
Length = 415
Score = 460 bits (1184), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/373 (68%), Positives = 277/373 (74%), Gaps = 11/373 (2%)
Query: 5 SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
SYTEPTGKNIR LTRLVRSA+ GD+L VHYSGHGTRLPA CIVPSDMN
Sbjct: 53 SYTEPTGKNIRSALTRLVRSAKPGDILFVHYSGHGTRLPAETGEDDDTGFDECIVPSDMN 112
Query: 65 LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQIXXXXXXXXXXXXXXXXXXXX 124
LITDDDFREFV+ V RG +TIVSDSCHSGGL+EEAKEQI
Sbjct: 113 LITDDDFREFVDGVPRGCTITIVSDSCHSGGLLEEAKEQIGESTKGEEEQSGSGFGFSSF 172
Query: 125 XXXXXXXRTVEDAIESRGFHVPSALSH-RGXXXXXXXXXXXXXXXIELPDGSRGYVKNRS 183
RTVEDAIESRGFH+PSAL H RG IELP+G GYVKNRS
Sbjct: 173 LH-----RTVEDAIESRGFHIPSALRHNRGRDDDVDEAQDRE---IELPNG--GYVKNRS 222
Query: 184 LPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXXXXXXX 243
LPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFM VI NKLQH
Sbjct: 223 LPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMNVIFNKLQHGSGESGG 282
Query: 244 XXXXXXXSLAQEFLKQKLDENDEGYAKPAMETEVGSKQEVYAGSAKRGLPDGGVLLSGCQ 303
LAQEFLKQKLD+NDEGYAKPA+ET+V SKQE YAG KRGLPDGG+L+SGCQ
Sbjct: 283 GILGLVGGLAQEFLKQKLDDNDEGYAKPALETKVESKQEAYAGPTKRGLPDGGILMSGCQ 342
Query: 304 TDQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKELERQGFTQRPGL 363
TDQTSADA+PAG+ +AYGAFSNAIQ I+E++DG ITN ELV +AR++L+ GFTQ+PGL
Sbjct: 343 TDQTSADASPAGSAASAYGAFSNAIQAIIEETDGAITNQELVQRAREKLKNSGFTQKPGL 402
Query: 364 YCSDHHVDASFVC 376
YCSDHHVDA FVC
Sbjct: 403 YCSDHHVDAPFVC 415
>Glyma08g25150.1
Length = 424
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/377 (63%), Positives = 266/377 (70%), Gaps = 10/377 (2%)
Query: 5 SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
SYTEPTGKNIR LTRL+RSA GDVL VHYSGHGTRLPA CIVPSDMN
Sbjct: 53 SYTEPTGKNIRSALTRLIRSARPGDVLFVHYSGHGTRLPAETGEDDDTGFDECIVPSDMN 112
Query: 65 LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQIXXXXXXXXXXXXXXXXXXXX 124
LITDDDFREFV+ V R KLTIVSDSCHSGGLI+ AKEQI
Sbjct: 113 LITDDDFREFVDGVPRECKLTIVSDSCHSGGLIDGAKEQI--GTSTKGEGQQHSGSGSGF 170
Query: 125 XXXXXXXRTVEDAIESRGFHVPSALSHRGXXXXXXXXXXXXXXXIELPDGSRGYVKNRSL 184
R+VEDAIESRG H+PSAL IELP GYVKNRSL
Sbjct: 171 GLSSFLRRSVEDAIESRGVHIPSALR---HHRHKHEHEADDDRDIELPHVDHGYVKNRSL 227
Query: 185 PLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXXXXXXXX 244
PLST+IDILKQKTGK+DIDVGKLR +L+D+FGEDASPKVKKFMKVILNKLQ
Sbjct: 228 PLSTIIDILKQKTGKNDIDVGKLRLSLYDIFGEDASPKVKKFMKVILNKLQQGDGGSGKQ 287
Query: 245 XXX--XXXSLAQEFLKQKLDENDE-GYAKPAMETEVGSKQEVYAG--SAKRGLPDGGVLL 299
SLAQEFLKQK+D +D+ GYAKPAMET+V SK E YAG SAK L DGG+L+
Sbjct: 288 GGILGLVGSLAQEFLKQKIDSSDDGGYAKPAMETKVESKYEAYAGTSSAKPRLSDGGILM 347
Query: 300 SGCQTDQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKELERQGFTQ 359
SGCQTDQTSADA+PAGN +AYGAFSNAIQ ++E+SDG +TN E+VLKAR++L+R GF Q
Sbjct: 348 SGCQTDQTSADASPAGNSASAYGAFSNAIQAVIEESDGAVTNQEIVLKAREKLKRGGFKQ 407
Query: 360 RPGLYCSDHHVDASFVC 376
RPGLYCSD HVD FVC
Sbjct: 408 RPGLYCSDDHVDGPFVC 424
>Glyma08g17320.1
Length = 351
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 181/398 (45%), Positives = 226/398 (56%), Gaps = 80/398 (20%)
Query: 12 KNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLI----- 66
KNIR L++LVRSA+ GDVL VHYS H TRLP CI+P+D +I
Sbjct: 1 KNIRVALSKLVRSAKPGDVLFVHYSRHATRLPPEMDEEDNTGYDECILPADCYIICFLFL 60
Query: 67 -------------------TDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQIXXX 107
++DDFR+FV+KV RG K+TIVSD CHSGGLIE AKEQI
Sbjct: 61 IRTVPRLDRRGELYCVIRQSNDDFRQFVDKVPRGCKITIVSDCCHSGGLIEAAKEQIG-- 118
Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXRTVEDAIESRGFHVPSALSHRGXXXXXXXXXXXXXX 167
D+ G + PS +
Sbjct: 119 ----------------------------DSTNEEGQNSPSLFHFKNLFHRN--------- 141
Query: 168 XIELPDGSRGYVKNRSLPLSTLIDILKQKTGKDD-IDVGKLRPTLFDVFGEDASPKVKKF 226
+E + VKNRSLPLSTL +ILKQK+GKDD I++GKLR TLF GEDASPKVKK+
Sbjct: 142 -MEQEEEEETIVKNRSLPLSTLTEILKQKSGKDDDIEIGKLRHTLF---GEDASPKVKKY 197
Query: 227 MKVILNKLQHXXXXXXXXXXXXXX----SLAQEFLKQKL---DENDEGYAKPAMETEVGS 279
M +++NKLQH LAQ+F +QKL D +DE YAK
Sbjct: 198 MNLVINKLQHGTSGGERGGGHTILGLVGDLAQQFFEQKLNDDDNHDEEYAKRGW----SK 253
Query: 280 KQEVYAGSAKRGLPDGGVLLSGCQTDQTSAD-ATPAGNPNNAYGAFSNAIQGILEKSDGE 338
++E +A S KR + D G+LLSGCQ+DQTSAD A+P GN + AYGAFSN IQ I+E++DG
Sbjct: 254 REEHHAASIKRNILDCGILLSGCQSDQTSADFASPYGNSDAAYGAFSNVIQSIIEETDGA 313
Query: 339 ITNSELVLKARKELERQGFTQRPGLYCSDHHVDASFVC 376
+TN ELVLKAR L+ QGF Q+PGLYCSD++V+ASF+C
Sbjct: 314 VTNRELVLKARMVLKSQGFDQKPGLYCSDNNVNASFLC 351
>Glyma15g30130.1
Length = 326
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 191/373 (51%), Gaps = 103/373 (27%)
Query: 5 SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
SY EP GKNIR LTRLV+SAE GDVL +HYSGHGTRL A CIVPSDMN
Sbjct: 56 SYMEPNGKNIRSVLTRLVQSAEPGDVLFMHYSGHGTRLLAKTREDGDTSYDECIVPSDMN 115
Query: 65 LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQIXXXXXXXXXXXXXXXXXXXX 124
LI DD ++ E V R
Sbjct: 116 LIIDD---DYREFVVR-------------------------------------------- 128
Query: 125 XXXXXXXRTVEDAIESRGFHVPSALSHRGXXXXXXXXXXXXXXXIELPDGSRGYVKNRSL 184
TVED ++SRG IELP GYVKN
Sbjct: 129 -------HTVEDTVKSRGVR-----------------------DIELPHKQCGYVKN--- 155
Query: 185 PLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXXXXXXXX 244
+KT K+DID+GKLR +L+D+FGEDASPKV KF+KVILNKL+H
Sbjct: 156 ---------SKKTRKNDIDIGKLRLSLYDIFGEDASPKVNKFLKVILNKLEHGNGRILGL 206
Query: 245 XXXXXXSLAQEFLKQKLDENDEG-YAKPAMETEVGSKQEVYAGSAKRGLPDGGVLLSGCQ 303
SLAQEFLKQKLD ND G YAKPAMET+V K E Y GS+ +
Sbjct: 207 VG----SLAQEFLKQKLDSNDGGGYAKPAMETKVERKYEAYVGSSS---------MKPRL 253
Query: 304 TDQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKELERQGFTQRPGL 363
+ + D P N AYGAF+NAI ++E+SDG +TN E++LKAR++L+R GF QRPGL
Sbjct: 254 SKWRNFDECPTSNFARAYGAFNNAIHVVIEESDGSVTNQEIILKAREKLKRVGFKQRPGL 313
Query: 364 YCSDHHVDASFVC 376
Y SD HVD FVC
Sbjct: 314 YYSDDHVDGPFVC 326
>Glyma19g30180.1
Length = 322
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 9 PTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITD 68
PTG NI+ L +V AE+GDVL HYSGHGTR+P+ IVP D NLITD
Sbjct: 66 PTGANIKEALANMVDGAEAGDVLYFHYSGHGTRIPSKKHGHPFRHEEA-IVPCDFNLITD 124
Query: 69 DDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQI 104
D R+ V +V +G LTI+SDSCHSGGLI++ KEQI
Sbjct: 125 LDLRQLVNRVPKGASLTILSDSCHSGGLIDKEKEQI 160
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 293 PDGGVLLSGCQTDQTSADATP-AGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKE 351
PD G+LLSGCQ D+TSAD P AYGAFSNA++ +L ++ ++N +LV++ARK+
Sbjct: 233 PDEGILLSGCQADETSADMNPNVACGQKAYGAFSNAVEMVLRENSPLLSNRDLVIRARKK 292
Query: 352 LERQGFTQRPGLYCSDHHVDASFVC 376
LE QGF Q P LYCSD + +ASF+C
Sbjct: 293 LETQGFQQHPCLYCSDENANASFLC 317
>Glyma15g05940.1
Length = 338
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 9 PTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM---NL 65
PT +NI L LV+ +S D LV ++SGHG + P I P D +
Sbjct: 176 PTKRNILESLKWLVKDCKSEDSLVFYFSGHGLQQPEYCKGDEIDGLDETICPVDFVREGM 235
Query: 66 ITDDDFRE-FVEKVSRGVKLTIVSDSCHSGGLIE 98
ITD+D V+ + +GV L V D+CHSG ++
Sbjct: 236 ITDNDINSTIVQPLKKGVTLHAVIDACHSGTTLD 269
>Glyma08g07630.1
Length = 318
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 9 PTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM----N 64
PT NI+ + L+ ++SGD LV H++GHG + P I P D N
Sbjct: 115 PTKYNIQMAMRWLIEGSQSGDSLVFHFAGHGAQEP-DMSGDELDRSDEVICPVDSREQGN 173
Query: 65 LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEA 100
++ D+ V + RG KL V DSCHSG +++ A
Sbjct: 174 ILDDEINATIVRPLPRGAKLHAVIDSCHSGTVLDLA 209
>Glyma15g05960.1
Length = 405
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 9 PTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM---NL 65
PT KNI L LV+ +S D LV ++SGHG + P I P D +
Sbjct: 142 PTKKNILDSLNWLVKDCQSEDSLVFYFSGHGLQQPEDRKGDEIDGLDETICPVDFLREGM 201
Query: 66 ITDDDFRE-FVEKVSRGVKLTIVSDSCHSGGLIE 98
ITD++ V+ + +GV L + D+CHSG ++
Sbjct: 202 ITDNEINSIIVQPLKQGVTLHAIIDACHSGTTLD 235
>Glyma13g07870.1
Length = 383
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 9 PTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM---NL 65
PT NI+ + L+ ++SGD LV H+SGHGT+ I P D
Sbjct: 158 PTKYNIQMAMRWLIEGSQSGDSLVFHFSGHGTQ-EMNMYGDEIDGFDEAICPVDYEEQGK 216
Query: 66 ITDDDFR-EFVEKVSRGVKLTIVSDSCHSGGLIEEA 100
I DD+ V + RG KL + D+C+SG +++ A
Sbjct: 217 ILDDEINAAIVRPLPRGAKLHAIIDACYSGTVLDLA 252