Miyakogusa Predicted Gene

Lj3g3v0382770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0382770.1 tr|Q2HUG6|Q2HUG6_MEDTR Peptidase C14, caspase
catalytic subunit p20 OS=Medicago truncatula
GN=MtrDRA,54.22,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Peptidase_C14,Peptidase C14, caspase cata,CUFF.40654.1
         (376 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g447080.1 | ICE-like protease (caspase) p20 domain protein...   480   e-136
Medtr2g063570.1 | ICE-like protease (caspase) p20 domain protein...   380   e-106
Medtr7g088035.1 | ICE-like protease (caspase) p20 domain protein...   112   8e-25
Medtr2g063807.1 | ICE-like protease (caspase) p20 domain protein...    66   7e-11
Medtr2g008990.1 | ICE-like protease (caspase) p20 domain protein...    60   2e-09
Medtr2g008990.2 | ICE-like protease (caspase) p20 domain protein...    60   2e-09
Medtr2g008990.3 | ICE-like protease (caspase) p20 domain protein...    60   3e-09
Medtr4g094202.1 | ICE-like protease (caspase) p20 domain protein...    49   6e-06

>Medtr8g447080.1 | ICE-like protease (caspase) p20 domain protein |
           HC | chr8:18452465-18454633 | 20130731
          Length = 412

 Score =  480 bits (1236), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 254/374 (67%), Positives = 277/374 (74%), Gaps = 16/374 (4%)

Query: 5   SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
           SYTEPTGKNIRR L+ LVRS+E GDVL VHYSGHGTRLPA            CIVPSDMN
Sbjct: 53  SYTEPTGKNIRRVLSELVRSSEDGDVLFVHYSGHGTRLPAETGEDDDTGFDECIVPSDMN 112

Query: 65  LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQIXXXXXXXXXXXXXXXXXXXX 124
           LITDDDF+EFV+ V RG +LTIVSDSCHSGGLIEEAKEQI                    
Sbjct: 113 LITDDDFKEFVDGVPRGCRLTIVSDSCHSGGLIEEAKEQIGESTKGEEEHSGSGFGLSGF 172

Query: 125 XXXXXXXRTVEDAIESRGFHVPSAL-SHRGXXXXXXXXXXXXXXXIELPDGSRGYVKNRS 183
                  R VEDAIESRGFHVPS L SH                 IELP G    VKNRS
Sbjct: 173 LH-----RKVEDAIESRGFHVPSGLRSH-----TRRDEETNEDRDIELPHG----VKNRS 218

Query: 184 LPLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXXXXXXX 243
           LPLSTLIDILKQKTGK+DIDVG+LRPTLFDVFGEDASPKVKKFMKVILNKLQH       
Sbjct: 219 LPLSTLIDILKQKTGKEDIDVGQLRPTLFDVFGEDASPKVKKFMKVILNKLQHGGGEGGQ 278

Query: 244 XXXXXXX-SLAQEFLKQKLDENDEGYAKPAMETEVGSKQEVYAGSAKRGLPDGGVLLSGC 302
                   SLAQEFLKQKL++NDEGYAKPAMETEVGSK EVYAGS+KRGLP GG+L+SGC
Sbjct: 279 GGILGMVGSLAQEFLKQKLNDNDEGYAKPAMETEVGSKHEVYAGSSKRGLPSGGILMSGC 338

Query: 303 QTDQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKELERQGFTQRPG 362
           QTDQTSADA P+GN  NAYGAFSNAIQ I+E++DG IT SEL+LKAR++L++ GFTQ+PG
Sbjct: 339 QTDQTSADACPSGNAANAYGAFSNAIQAIIEETDGAITYSELILKAREKLQKDGFTQKPG 398

Query: 363 LYCSDHHVDASFVC 376
           LYCSDHHVD  F+C
Sbjct: 399 LYCSDHHVDDPFLC 412


>Medtr2g063570.1 | ICE-like protease (caspase) p20 domain protein |
           HC | chr2:26836843-26838886 | 20130731
          Length = 401

 Score =  380 bits (977), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/372 (55%), Positives = 242/372 (65%), Gaps = 26/372 (6%)

Query: 5   SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
           SYT+PTGKNIR  ++RLVRSA+ GDV  VHYSGHGTRLPA            CIVP+DMN
Sbjct: 56  SYTQPTGKNIRSAMSRLVRSAQPGDVFFVHYSGHGTRLPAETGEDDDTGYDECIVPTDMN 115

Query: 65  LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQIXXXXXXXXXXXXXXXXXXXX 124
           LITD+DFR+FVEKV +  ++TIVSDSCHSGGLIE AKEQI                    
Sbjct: 116 LITDEDFRDFVEKVPKSCRITIVSDSCHSGGLIESAKEQIGDSTKEGGQNSSPGFKNFLP 175

Query: 125 XXXXXXXRTVEDAIESRGFHVPSALSHRGXXXXXXXXXXXXXXXIELPDGSRGYVKNRSL 184
                  R V+  I       PS L H+                +EL   +  YVKNRSL
Sbjct: 176 -------RAVDTEI-------PSELCHQ-------YKSGIGEKDVELHHVNHRYVKNRSL 214

Query: 185 PLSTLIDILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMKVILNKLQHXXXXXXXX 244
            LSTLIDILKQKTGKDDI++GKLRPTLFD+FGEDASPKVK F+K +LNKLQ         
Sbjct: 215 SLSTLIDILKQKTGKDDIEIGKLRPTLFDIFGEDASPKVKNFIKFVLNKLQGGESGGHSG 274

Query: 245 XXXXXXSLAQEFLKQKLDENDEGYAKPAMETEVGSKQEVYAGSAKRGLPDGGVLLSGCQT 304
                 +LAQ  L+ KL ++DE Y  P     V S  E YA S K  + DGG+LLSGCQT
Sbjct: 275 ILGLVSNLAQGLLEYKLHDSDEEYENP-----VKSAPETYAISTKSDIVDGGILLSGCQT 329

Query: 305 DQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKELERQGFTQRPGLY 364
           DQTSADA+P GN   AYGAFSNAIQ I+ + DG +TN E++LKARK+L RQG++Q+PGLY
Sbjct: 330 DQTSADASPNGNSEEAYGAFSNAIQAIIAEKDGVVTNREVILKARKKLHRQGYSQKPGLY 389

Query: 365 CSDHHVDASFVC 376
           CSD+HVDASF+C
Sbjct: 390 CSDNHVDASFIC 401


>Medtr7g088035.1 | ICE-like protease (caspase) p20 domain protein |
           HC | chr7:34248766-34247292 | 20130731
          Length = 319

 Score =  112 bits (279), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 55/100 (55%), Positives = 69/100 (69%), Gaps = 1/100 (1%)

Query: 5   SYTEPTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN 64
           S T PTG NI++ L+ +V  AE+GDVL  HYSGHGTR+P+             IVP D N
Sbjct: 60  SSTMPTGANIKQALSSMVDKAEAGDVLYFHYSGHGTRIPSKIHGHPFRHEE-AIVPCDFN 118

Query: 65  LITDDDFREFVEKVSRGVKLTIVSDSCHSGGLIEEAKEQI 104
           LITD DFR+ V ++ +G  LTI+SDSCHSGGLI++ KEQI
Sbjct: 119 LITDLDFRQLVNRIPKGASLTILSDSCHSGGLIDKEKEQI 158



 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 63/83 (75%)

Query: 293 PDGGVLLSGCQTDQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSELVLKARKEL 352
           PD G+LLSGCQ+D+TSAD +P  +   AYGAFSNA+Q +L+++ G+++N E+V+KAR  L
Sbjct: 231 PDEGILLSGCQSDETSADMSPNMSNGKAYGAFSNAVQIVLKENKGKLSNREVVVKARDVL 290

Query: 353 ERQGFTQRPGLYCSDHHVDASFV 375
           + QGF Q P LYCSD + D  F+
Sbjct: 291 KGQGFVQHPCLYCSDENADDVFL 313


>Medtr2g063807.1 | ICE-like protease (caspase) p20 domain protein |
           LC | chr2:26955499-26956456 | 20130731
          Length = 143

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 18/92 (19%)

Query: 284 YAGSAKRGLPDGGVLLSGCQTDQTSADATPAGNPNNAYGAFSNAIQGILEKSDGEITNSE 343
           +A S K  + D G+LL GCQT  +            AYG F  AI  I+   D       
Sbjct: 39  FATSIKENIVDSGILLIGCQTRIS----------EEAYGVFRYAIHAIIAGKD------- 81

Query: 344 LVLKARKELERQGFTQRPGLYCSDHHVDASFV 375
            V+  RK+L RQG TQ P +YCSD++VDA F+
Sbjct: 82  -VVTNRKKLHRQGKTQMPRIYCSDYNVDAPFM 112


>Medtr2g008990.1 | ICE-like protease (caspase) p20 domain protein |
           HC | chr2:1721288-1718020 | 20130731
          Length = 416

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 9   PTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM---NL 65
           PT +NI   L  LV+  + GD LV ++SGHGT+ PA             I P D     +
Sbjct: 171 PTKRNIMESLKWLVKDCKFGDSLVFYFSGHGTQQPAIDKDDELDGFDETICPVDFIREGM 230

Query: 66  ITDDDFRE-FVEKVSRGVKLTIVSDSCHSGGLIE 98
           ITDD+     V  +  GVKL  + D+CHSG  ++
Sbjct: 231 ITDDEINSTIVRPLKEGVKLHAIIDACHSGTTLD 264


>Medtr2g008990.2 | ICE-like protease (caspase) p20 domain protein |
           HC | chr2:1721288-1718020 | 20130731
          Length = 409

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 9   PTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM---NL 65
           PT +NI   L  LV+  + GD LV ++SGHGT+ PA             I P D     +
Sbjct: 171 PTKRNIMESLKWLVKDCKFGDSLVFYFSGHGTQQPAIDKDDELDGFDETICPVDFIREGM 230

Query: 66  ITDDDFRE-FVEKVSRGVKLTIVSDSCHSGGLIE 98
           ITDD+     V  +  GVKL  + D+CHSG  ++
Sbjct: 231 ITDDEINSTIVRPLKEGVKLHAIIDACHSGTTLD 264


>Medtr2g008990.3 | ICE-like protease (caspase) p20 domain protein |
           HC | chr2:1721381-1718198 | 20130731
          Length = 408

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 9   PTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM---NL 65
           PT +NI   L  LV+  + GD LV ++SGHGT+ PA             I P D     +
Sbjct: 171 PTKRNIMESLKWLVKDCKFGDSLVFYFSGHGTQQPAIDKDDELDGFDETICPVDFIREGM 230

Query: 66  ITDDDFRE-FVEKVSRGVKLTIVSDSCHSGGLIE 98
           ITDD+     V  +  GVKL  + D+CHSG  ++
Sbjct: 231 ITDDEINSTIVRPLKEGVKLHAIIDACHSGTTLD 264


>Medtr4g094202.1 | ICE-like protease (caspase) p20 domain protein |
           HC | chr4:37409420-37411484 | 20130731
          Length = 382

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 9   PTGKNIRRELTRLVRSAESGDVLVVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDM--NLI 66
           PT  NI+  L  L+  ++SGD LV HYSGHGT+               C V  +    ++
Sbjct: 158 PTKYNIQMALRWLMEGSKSGDSLVFHYSGHGTQEVNMNEIDDRYDNAICPVDHEHKGKML 217

Query: 67  TDDDFREFVEKVSRGVKLTIVSDSCHSGGLIE 98
            ++     V  +  G KL  + D+CHSG +++
Sbjct: 218 NNEINATIVRPLPFGAKLHAIIDACHSGNVLD 249